FFCP PHASE1:Mm9::chr17:86838357..86838370,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=195|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:86838357..86838370,+|id=chr17:86838357..86838370,+|ontology_enrichment_celltype=CL:0002563!1.32e-11!9;CL:0002251!1.32e-11!9;CL:0000239!8.82e-11!6;CL:0000677!8.82e-11!6;CL:0000212!8.82e-11!6;CL:0000584!8.82e-11!6;CL:0000075!4.22e-09!7;CL:0000066!1.66e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,1.06e-09,6;CL:0000677,1.06e-09,6;CL:0000584,1.06e-09,6;CL:0000075,2.52e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.56e-25!43;UBERON:0005409!5.89e-18!59;UBERON:0000344!5.05e-17!15;UBERON:0001242!9.40e-15!13;UBERON:0000060!9.40e-15!13;UBERON:0001262!9.40e-15!13;UBERON:0004786!9.40e-15!13;UBERON:0003350!1.32e-11!9;UBERON:0004808!1.32e-11!9;UBERON:0001277!1.32e-11!9;UBERON:0004923!6.91e-11!24;UBERON:0000485!3.42e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.97e-51,31;UBERON:0005409,1.28e-35,47;UBERON:0001242,2.50e-12,13;UBERON:0001262,2.50e-12,13;UBERON:0004786,2.50e-12,13;UBERON:0004921,2.85e-12,114;UBERON:0001007,5.48e-12,116;UBERON:0001555,5.48e-12,116;UBERON:0007026,5.48e-12,116;UBERON:0004119,1.03e-11,118;UBERON:0000925,1.03e-11,118;UBERON:0006595,1.03e-11,118;UBERON:0000344,1.44e-10,15;UBERON:0001155,3.14e-08,2;UBERON:0000059,3.14e-08,2;UBERON:0002108,6.06e-08,4|phase1_expression=0,3.48975407639361,0.909998478779072,6.35174843744343,5.50985302940982,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,1.72269589234506,1.29228598847722,0.646413698057667,1.33016393619462,1.00812051903972,0,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,13.0474232852686,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,10.2429822724977,2.90895623329899,0,0,0,1.4117846723634,2.66853652613844,1.71203063501303,4.74529061544512,3.62337700392824,3.51869292320377,3.78017296878187,1.9496408711912,1.79763881730844,2.37751854862164,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01806417204558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0.384150914429216,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0,0,0,0.644613162144895,0,0,0|short_description=p@chr17:86838357..86838370,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:86838357..86838370,+ | |||
|description=CAGE_peak_at_chr17:86838357..86838370,+ | |||
|id=chr17:86838357..86838370,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.32e-11!9;CL:0002251!1.32e-11!9;CL:0000239!8.82e-11!6;CL:0000677!8.82e-11!6;CL:0000212!8.82e-11!6;CL:0000584!8.82e-11!6;CL:0000075!4.22e-09!7;CL:0000066!1.66e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.06e-09,6;CL:0000677,1.06e-09,6;CL:0000584,1.06e-09,6;CL:0000075,2.52e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.56e-25!43;UBERON:0005409!5.89e-18!59;UBERON:0000344!5.05e-17!15;UBERON:0001242!9.40e-15!13;UBERON:0000060!9.40e-15!13;UBERON:0001262!9.40e-15!13;UBERON:0004786!9.40e-15!13;UBERON:0003350!1.32e-11!9;UBERON:0004808!1.32e-11!9;UBERON:0001277!1.32e-11!9;UBERON:0004923!6.91e-11!24;UBERON:0000485!3.42e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.97e-51,31;UBERON:0005409,1.28e-35,47;UBERON:0001242,2.50e-12,13;UBERON:0001262,2.50e-12,13;UBERON:0004786,2.50e-12,13;UBERON:0004921,2.85e-12,114;UBERON:0001007,5.48e-12,116;UBERON:0001555,5.48e-12,116;UBERON:0007026,5.48e-12,116;UBERON:0004119,1.03e-11,118;UBERON:0000925,1.03e-11,118;UBERON:0006595,1.03e-11,118;UBERON:0000344,1.44e-10,15;UBERON:0001155,3.14e-08,2;UBERON:0000059,3.14e-08,2;UBERON:0002108,6.06e-08,4 | |||
|phase1_expression=0,3.48975407639361,0.909998478779072,6.35174843744343,5.50985302940982,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,1.72269589234506,1.29228598847722,0.646413698057667,1.33016393619462,1.00812051903972,0,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,13.0474232852686,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,10.2429822724977,2.90895623329899,0,0,0,1.4117846723634,2.66853652613844,1.71203063501303,4.74529061544512,3.62337700392824,3.51869292320377,3.78017296878187,1.9496408711912,1.79763881730844,2.37751854862164,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01806417204558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0.384150914429216,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0,0,0,0.644613162144895,0,0,0 | |||
|short_description=p@chr17:86838357..86838370,+ | |||
}} |
Latest revision as of 10:58, 5 August 2015
Short description: | p@chr17:86838357..86838370, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:86838357..86838370, + |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.06e-09 | 6 |
gut absorptive cell | 1.06e-09 | 6 |
enterocyte | 1.06e-09 | 6 |
columnar/cuboidal epithelial cell | 2.52e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.97e-51 | 31 |
gastrointestinal system | 1.28e-35 | 47 |
intestinal mucosa | 2.50e-12 | 13 |
wall of intestine | 2.50e-12 | 13 |
gastrointestinal system mucosa | 2.50e-12 | 13 |
subdivision of digestive tract | 2.85e-12 | 114 |
digestive system | 5.48e-12 | 116 |
digestive tract | 5.48e-12 | 116 |
primitive gut | 5.48e-12 | 116 |
endoderm-derived structure | 1.03e-11 | 118 |
endoderm | 1.03e-11 | 118 |
presumptive endoderm | 1.03e-11 | 118 |
mucosa | 1.44e-10 | 15 |
colon | 3.14e-08 | 2 |
large intestine | 3.14e-08 | 2 |
small intestine | 6.06e-08 | 4 |