FFCP PHASE1:Mm9::chr1:88998205..88998211,-: Difference between revisions
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{{FFCP|EntrezGene=76768|HGNC=|MCL_coexpression_id=74|UniProt=F8VPQ6,Q0VD75|association_with_transcript=-24bp_to_ENSMUST00000113270,NM_001081082,uc007bwa.1_5end|description=CAGE_peak_2_at_Alpi_5end|id=chr1:88998205..88998211,-|ontology_enrichment_celltype=CL:0002563!6.02e-11!9;CL:0002251!6.02e-11!9;CL:0000239!7.26e-09!6;CL:0000677!7.26e-09!6;CL:0000212!7.26e-09!6;CL:0000584!7.26e-09!6;CL:0000075!2.03e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,1.90e-11,6;CL:0000677,1.90e-11,6;CL:0000584,1.90e-11,6;CL:0000075,1.12e-09,7;CL:0002563,1.44e-09,9;CL:0002251,1.44e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.84e-24!43;UBERON:0005409!2.55e-22!59;UBERON:0000344!2.30e-18!15;UBERON:0001242!1.28e-15!13;UBERON:0000060!1.28e-15!13;UBERON:0001262!1.28e-15!13;UBERON:0004786!1.28e-15!13;UBERON:0003350!6.02e-11!9;UBERON:0004808!6.02e-11!9;UBERON:0001277!6.02e-11!9;UBERON:0004923!9.92e-10!24;UBERON:0000485!1.53e-08!11;UBERON:0001007!3.02e-07!128;UBERON:0001555!3.02e-07!128;UBERON:0007026!3.02e-07!128;UBERON:0004119!5.73e-07!130;UBERON:0000925!5.73e-07!130;UBERON:0006595!5.73e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.87e-36,31;UBERON:0005409,4.97e-29,47;UBERON:0000344,3.41e-19,15;UBERON:0001242,1.26e-15,13;UBERON:0001262,1.26e-15,13;UBERON:0004786,1.26e-15,13;UBERON:0004923,1.04e-10,24;UBERON:0003350,1.44e-09,9;UBERON:0004808,1.44e-09,9;UBERON:0001277,1.44e-09,9;UBERON:0001007,9.76e-09,116;UBERON:0001555,9.76e-09,116;UBERON:0007026,9.76e-09,116;UBERON:0004119,1.88e-08,118;UBERON:0000925,1.88e-08,118;UBERON:0006595,1.88e-08,118;UBERON:0002108,8.55e-08,4;UBERON:0000485,1.35e-07,11;UBERON:0004921,2.68e-07,114|phase1_expression=0,38.3872948403297,81.4448638507269,83.1776581093783,71.1271936523813,9.40123922706583,11.2134067485852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.835082392921,81.4402947788454,24.1177424928308,46.5222955851801,38.1384081854024,23.372880593134,14.3657173963161,5.09980174507201,0,0,0,0.288851619751275,1.82858109894342,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75822122540183,0,0,0,0,0,0,0,0,0,0,8.5637909789295,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,5.59175283654366,0,0,60.032407974019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,559.729418374554,53.4190144660359,0,0,0.38660238396628,7.46229041106367,10.4517680607089,23.0173007596197,83.0425857702895,60.115118474264,42.2243150784453,56.5036380596868,33.3388588973695,69.2090944663751,19.8847005884719,84.2367585865973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,17.0562673491026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.4846168453642,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40406943068342,0.627264888043406,3.27543845619266,0.404593039154462,1.65306911450672,0,2.46268449254406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,1.44224540067226,0.962757628775446,0,0,0.188626341386076,0.749132059759059,1.15245274328765,0.746661096422973,0.952587382566147,1.0429589335037,1.35036454324594,1.23625770240992,1.03039244094078,0,1.24233064311536,1.90748951957857,1.30811774969096,0.846984423737976,0.592302255241736,0.548783918618318,0.789209134313529,1.22223702461276,0,0.355905054372522,1.0835493061312,0.818462086339379,1.08455788830176,1.15743966588685,0,2.33931608445408,4.94203424311086,0,0,0|short_description=p2@Alpi}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76768 | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8VPQ6,uniprot:Q0VD75 | |||
|association_with_transcript=-24bp_to_ENSMUST00000113270,NM_001081082,uc007bwa.1_5end | |||
|cluster_id=chr1:88998205..88998211,- | |||
|description=CAGE_peak_2_at_Alpi_5end | |||
|id=chr1:88998205..88998211,- | |||
|ontology_enrichment_celltype=CL:0002563!6.02e-11!9;CL:0002251!6.02e-11!9;CL:0000239!7.26e-09!6;CL:0000677!7.26e-09!6;CL:0000212!7.26e-09!6;CL:0000584!7.26e-09!6;CL:0000075!2.03e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.90e-11,6;CL:0000677,1.90e-11,6;CL:0000584,1.90e-11,6;CL:0000075,1.12e-09,7;CL:0002563,1.44e-09,9;CL:0002251,1.44e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.84e-24!43;UBERON:0005409!2.55e-22!59;UBERON:0000344!2.30e-18!15;UBERON:0001242!1.28e-15!13;UBERON:0000060!1.28e-15!13;UBERON:0001262!1.28e-15!13;UBERON:0004786!1.28e-15!13;UBERON:0003350!6.02e-11!9;UBERON:0004808!6.02e-11!9;UBERON:0001277!6.02e-11!9;UBERON:0004923!9.92e-10!24;UBERON:0000485!1.53e-08!11;UBERON:0001007!3.02e-07!128;UBERON:0001555!3.02e-07!128;UBERON:0007026!3.02e-07!128;UBERON:0004119!5.73e-07!130;UBERON:0000925!5.73e-07!130;UBERON:0006595!5.73e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.87e-36,31;UBERON:0005409,4.97e-29,47;UBERON:0000344,3.41e-19,15;UBERON:0001242,1.26e-15,13;UBERON:0001262,1.26e-15,13;UBERON:0004786,1.26e-15,13;UBERON:0004923,1.04e-10,24;UBERON:0003350,1.44e-09,9;UBERON:0004808,1.44e-09,9;UBERON:0001277,1.44e-09,9;UBERON:0001007,9.76e-09,116;UBERON:0001555,9.76e-09,116;UBERON:0007026,9.76e-09,116;UBERON:0004119,1.88e-08,118;UBERON:0000925,1.88e-08,118;UBERON:0006595,1.88e-08,118;UBERON:0002108,8.55e-08,4;UBERON:0000485,1.35e-07,11;UBERON:0004921,2.68e-07,114 | |||
|phase1_expression=0,38.3872948403297,81.4448638507269,83.1776581093783,71.1271936523813,9.40123922706583,11.2134067485852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.835082392921,81.4402947788454,24.1177424928308,46.5222955851801,38.1384081854024,23.372880593134,14.3657173963161,5.09980174507201,0,0,0,0.288851619751275,1.82858109894342,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75822122540183,0,0,0,0,0,0,0,0,0,0,8.5637909789295,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,5.59175283654366,0,0,60.032407974019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,559.729418374554,53.4190144660359,0,0,0.38660238396628,7.46229041106367,10.4517680607089,23.0173007596197,83.0425857702895,60.115118474264,42.2243150784453,56.5036380596868,33.3388588973695,69.2090944663751,19.8847005884719,84.2367585865973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,17.0562673491026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.4846168453642,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40406943068342,0.627264888043406,3.27543845619266,0.404593039154462,1.65306911450672,0,2.46268449254406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,1.44224540067226,0.962757628775446,0,0,0.188626341386076,0.749132059759059,1.15245274328765,0.746661096422973,0.952587382566147,1.0429589335037,1.35036454324594,1.23625770240992,1.03039244094078,0,1.24233064311536,1.90748951957857,1.30811774969096,0.846984423737976,0.592302255241736,0.548783918618318,0.789209134313529,1.22223702461276,0,0.355905054372522,1.0835493061312,0.818462086339379,1.08455788830176,1.15743966588685,0,2.33931608445408,4.94203424311086,0,0,0 | |||
|short_description=p2@Alpi | |||
}} |
Revision as of 03:34, 6 August 2015
Short description: | p2@Alpi |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Alpi_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | -24bp_to_ENSMUST00000113270, NM_001081082, uc007bwa.1_5end |
EntrezGene: | 76768 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.90e-11 | 6 |
gut absorptive cell | 1.90e-11 | 6 |
enterocyte | 1.90e-11 | 6 |
columnar/cuboidal epithelial cell | 1.12e-09 | 7 |
intestinal epithelial cell | 1.44e-09 | 9 |
epithelial cell of alimentary canal | 1.44e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.87e-36 | 31 |
gastrointestinal system | 4.97e-29 | 47 |
mucosa | 3.41e-19 | 15 |
intestinal mucosa | 1.26e-15 | 13 |
wall of intestine | 1.26e-15 | 13 |
gastrointestinal system mucosa | 1.26e-15 | 13 |
organ component layer | 1.04e-10 | 24 |
epithelium of mucosa | 1.44e-09 | 9 |
gastrointestinal system epithelium | 1.44e-09 | 9 |
intestinal epithelium | 1.44e-09 | 9 |
digestive system | 9.76e-09 | 116 |
digestive tract | 9.76e-09 | 116 |
primitive gut | 9.76e-09 | 116 |
endoderm-derived structure | 1.88e-08 | 118 |
endoderm | 1.88e-08 | 118 |
presumptive endoderm | 1.88e-08 | 118 |
small intestine | 8.55e-08 | 4 |
simple columnar epithelium | 1.35e-07 | 11 |
subdivision of digestive tract | 2.68e-07 | 114 |