FFCP PHASE1:Hg19::chr6:56258957..56258965,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17025 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-65bp_to_ENST00000370819,uc003pcu.1_5end | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_10_at_COL21A1_5end | |||
|id=chr6:56258957..56258965,- | |||
|ontology_enrichment_celltype=CL:0000039!3.17e-26!7;CL:0000586!3.17e-26!7;CL:1000415!2.47e-11!2;CL:0001014!3.02e-11!2;CL:0001016!3.02e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.40e-29;7!CL:0000586;3.40e-29;7!CL:1000415;8.10e-26;2!CL:0000083;1.00e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.16e-29,7;CL:0000586,3.16e-29,7;CL:1000415,9.18e-26,2;CL:0000083,1.00e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!1.88e-21!1;DOID:10165!1.88e-21!1;DOID:1798!1.88e-21!1;DOID:3095!8.25e-09!22;DOID:2994!8.25e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.42e-50;1!DOID:10165;2.42e-50;1!DOID:1798;2.42e-50;1!DOID:1793;1.00e-13;4!DOID:3095;4.43e-10;22!DOID:2994;4.43e-10;22!DOID:170;1.32e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.42e-50,1;DOID:10165,2.42e-50,1;DOID:1798,2.42e-50,1;DOID:1793,1.00e-13,4;DOID:3095,4.33e-10,22;DOID:2994,4.33e-10,22;DOID:170,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002110!5.54e-08!3;UBERON:0006242!5.54e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.03e-17;3!UBERON:0002075;4.68e-12;18!UBERON:0002294;2.26e-08;7!UBERON:0001173;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.12e-17,3;UBERON:0006242,1.12e-17,3;UBERON:0002075,4.81e-12,18;UBERON:0002294,8.85e-07,9;UBERON:0001173,8.85e-07,9;UBERON:0004912,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9169171316418,1.97466817701499,0.108647371922008,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17330829640882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19050711170276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@COL21A1 | |||
}} |
Revision as of 12:23, 22 January 2014
Short description: | p10@COL21A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_COL21A1_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -65bp_to_ENST00000370819, uc003pcu.1_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.16e-29 | 7 |
germ cell | 3.16e-29 | 7 |
epithelial cell of gall bladder | 9.18e-26 | 2 |
epithelial cell of pancreas | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.12e-17 | 3 |
gall bladder primordium | 1.12e-17 | 3 |
viscus | 4.81e-12 | 18 |
biliary system | 8.85e-07 | 9 |
biliary tree | 8.85e-07 | 9 |
biliary bud | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.42e-50 | 1 |
endocrine pancreas cancer | 2.42e-50 | 1 |
pancreatic endocrine carcinoma | 2.42e-50 | 1 |
pancreatic cancer | 1.00e-13 | 4 |
germ cell and embryonal cancer | 4.33e-10 | 22 |
germ cell cancer | 4.33e-10 | 22 |
endocrine gland cancer | 1.32e-09 | 6 |