FFCP PHASE1:Hg19::chr8:117456880..117456884,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr8:117456880..117456884,- | |||
|id=chr8:117456880..117456884,- | |||
|ontology_enrichment_celltype=CL:0002076!6.15e-08!43;CL:0002368!7.45e-08!13;CL:0002202!1.53e-07!9;CL:0002632!1.53e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.76e-19;13!CL:0002202;5.57e-18;9!CL:0002632;5.57e-18;9!CL:0000307;1.98e-14;3!CL:0002327;7.71e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.73e-19,13;CL:0002202,4.10e-18,9;CL:0002632,4.10e-18,9;CL:0000068,1.98e-14,3;CL:0000069,1.98e-14,3;CL:0000307,1.98e-14,3;CL:0000377,1.98e-14,3;CL:0002327,6.02e-11,4;CL:0002076,3.54e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000377;1.98e-14;3!UBERON:0007123;5.06e-09;5 | |||
|ontology_enrichment_disease=DOID:1749!3.73e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.79e-18;14!DOID:3112;3.11e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.36e-18,14;DOID:3112,4.44e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.83e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.11e-11;1!UBERON:0007196;6.92e-11;15!UBERON:0001558;6.92e-11;15!UBERON:0001911;7.71e-11;4!UBERON:0002046;5.06e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.43e-11,1;UBERON:0007196,5.78e-11,15;UBERON:0001558,5.78e-11,15;UBERON:0001911,6.02e-11,4;UBERON:0005333,6.02e-11,4;UBERON:0008425,6.02e-11,4;UBERON:0005311,6.02e-11,4;UBERON:0002046,5.72e-09,5;UBERON:0004117,5.72e-09,5;UBERON:0007689,5.72e-09,5;UBERON:0007123,5.72e-09,5;UBERON:0003091,5.72e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.47296445977717,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0.226864366320042,0,0,0,0.300091096084402,0.206105058476878,0,0,0.506328996723799,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,1.97028749946266,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.328508624055237,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0,0,0,0,0.165284915360978,0,1.27612712494584,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0.573645408816206,0,0,0.709522128141196,0,0,0,0,0.0962221127255121,1.34060455107157,3.26672954583968,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.329607748453519,0,0.19924798825107,0,0,0,0.123084805461069,0,0.629078458031288,0,0,0,0,1.11136990144637,0,0,0,0,0,0,3.75518379342149,1.77977555204936,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.489961987071888,0.783532859223623,0,0,0,0,0,0,0,0,1.50746117111426,0.794858446811959,0,0,0.480952921509202,0,0.799238438328521,0,0,0,1.1524383839052,0.248505071130865,0,0.67952103036807,0.627617077873999,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739202355635845,0,0,0,0,0,0,0,0,0,0.328370082997356,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0.544017803369474,0.2506898940227,0,0.655745261419609,0,0,0,0,0.573409195690071,0,0.248385611765534,0,0.74988244777264,0,0,0.235265819698172,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0.151230923763239,1.08806040407946,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.655219697692825,0.491545817507439,0,0,0,0,1.70254786070051,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.707818340086442,0.917142992608395,1.61735932610474,0,0.690359926060101,0,0.0752103283492573,0,0,0,1.14640342257068,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.889851215136553,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0.71421575442263,8.4694769211766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3639558774184,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr8:117456880..117456884,- | |||
}} |
Revision as of 23:27, 22 January 2014
Short description: | p@chr8:117456880..117456884, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:117456880..117456884, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.73e-19 | 13 |
epithelial cell of tracheobronchial tree | 4.10e-18 | 9 |
epithelial cell of lower respiratory tract | 4.10e-18 | 9 |
duct epithelial cell | 1.98e-14 | 3 |
branched duct epithelial cell | 1.98e-14 | 3 |
tracheal epithelial cell | 1.98e-14 | 3 |
tracheoblast | 1.98e-14 | 3 |
mammary gland epithelial cell | 6.02e-11 | 4 |
endo-epithelial cell | 3.54e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.43e-11 | 1 |
tracheobronchial tree | 5.78e-11 | 15 |
lower respiratory tract | 5.78e-11 | 15 |
mammary gland | 6.02e-11 | 4 |
mammary bud | 6.02e-11 | 4 |
mammary ridge | 6.02e-11 | 4 |
mammary placode | 6.02e-11 | 4 |
thyroid gland | 5.72e-09 | 5 |
pharyngeal pouch | 5.72e-09 | 5 |
thyroid diverticulum | 5.72e-09 | 5 |
pharyngeal pouch 2 | 5.72e-09 | 5 |
thyroid primordium | 5.72e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.36e-18 | 14 |
papillary adenocarcinoma | 4.44e-11 | 1 |