FFCP PHASE1:Hg19::chr8:128806307..128806348,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=5820 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=9709 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-430bp_to_ENST00000504719,NR_003367,uc003ysj.2,uc010mdp.1,uc010mdq.2_5end | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_9_at_PVT1_5end | |||
|id=chr8:128806307..128806348,+ | |||
|ontology_enrichment_celltype=CL:0000077!3.48e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.53e-16;1!CL:0002625;1.53e-16;1!CL:0000216;1.53e-16;1!CL:0002253;3.43e-09;2!CL:1000507;5.11e-07;10!CL:1000494;5.11e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.86e-17,1;CL:0002625,8.86e-17,1;CL:0000216,8.86e-17,1;CL:0002253,3.43e-09,2;CL:1000507,5.43e-07,10;CL:1000494,5.43e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.53e-16;1!UBERON:0001343;1.53e-16;1!UBERON:0004910;1.53e-16;1!UBERON:0004813;1.53e-16;1!UBERON:0004909;6.17e-09;2!UBERON:0004211;5.11e-07;10!UBERON:0009773;5.11e-07;10!UBERON:0001231;5.11e-07;10!UBERON:0004810;5.11e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.86e-17,1;UBERON:0001343,8.86e-17,1;UBERON:0004910,8.86e-17,1;UBERON:0005154,8.86e-17,1;UBERON:0005295,8.86e-17,1;UBERON:0004813,8.86e-17,1;UBERON:0005297,8.86e-17,1;UBERON:0005294,8.86e-17,1;UBERON:0010141,8.86e-17,1;UBERON:0005891,8.86e-17,1;UBERON:0004909,4.70e-09,2;UBERON:0004810,5.43e-07,10 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0.267899184852239,0,0,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0.662045904066094,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0.89694817844431,0.427114777637135,0.211931901159562,0.900273288253207,0.103052529238439,0,0.37223371266318,0.337552664482532,0.0974370051611986,0.252433774244115,0.460249493211497,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0,0,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0.224262168690721,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.229628896329213,0,0,0,0,1.56869953835371,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.307007349452259,0,0.644521469209642,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,2.4246415373971,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.539617372749944,0,0,0.202182481573316,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0.75894634753143,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,1.05562704063997,0,0,0.755798243562828,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.262379999988587,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6452436446665,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.485560759068186,0,0,0,0,0.300646838828985,0,0.664653872707185,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0.0967563312890851,0.146178634172371,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,0.391102765469606,0.160317640503067,0,0,0,0.458146384663663,0.514784993585894,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0.482259445395058,0.962776056180637,0.415440338029185,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0.717149357331379,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0,0,0,0.302461847526478,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0.428883182749851,0,0.226705925512272,0.231522474323834,1.71315693154527,0,0.308801447160972,0.657852148736121,0.883445729729405,0.771656153083659,0.337884881306145,0.512483037175893,0,0.607719912354764,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.215649622793364,0.471797825567689,0.436838552768056,1.52759276958623,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0.596748666348824,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.464965701472501,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.9164274741762,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,2.30875085165401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0.0679914901909147,0,0.5290268405154,0.371995018166751,0.462175628631418,0.432626562123789,0.126166424835079,0,0,0.509944148709909,0.534434810531121,0.827054095813604,0.250707539292375,0.227336094654718,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0.1067273458777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| |||
|short_description=p9@PVT1 | |||
}} |
Revision as of 23:48, 22 January 2014
Short description: | p9@PVT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PVT1_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | -430bp_to_ENST00000504719, NR_003367, uc003ysj.2, uc010mdp.1, uc010mdq.2_5end |
EntrezGene: | PVT1 |
HGNC: | 9709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.86e-17 | 1 |
seminiferous tubule epithelial cell | 8.86e-17 | 1 |
Sertoli cell | 8.86e-17 | 1 |
epithelial cell of large intestine | 3.43e-09 | 2 |
kidney tubule cell | 5.43e-07 | 10 |
nephron tubule epithelial cell | 5.43e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 8.86e-17 | 1 |
seminiferous tubule of testis | 8.86e-17 | 1 |
epithelium of male gonad | 8.86e-17 | 1 |
epithelial cord | 8.86e-17 | 1 |
sex cord | 8.86e-17 | 1 |
seminiferous tubule epithelium | 8.86e-17 | 1 |
testis sex cord | 8.86e-17 | 1 |
genital ridge | 8.86e-17 | 1 |
primitive sex cord of indifferent gonad | 8.86e-17 | 1 |
coelomic epithelium | 8.86e-17 | 1 |
epithelium of gonad | 4.70e-09 | 2 |
nephron tubule epithelium | 5.43e-07 | 10 |