FFCP PHASE1:Mm9::chr4:140950524..140950553,-: Difference between revisions
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{{FFCP|EntrezGene=12733|HGNC=|MCL_coexpression_id=11|UniProt=|association_with_transcript=188bp_to_ENSMUST00000150334_5end|description=CAGE_peak_3_at_Clcnka_5end|id=chr4:140950524..140950553,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!3.82e-20!14;UBERON:0003918!3.82e-20!14;UBERON:0005095!3.82e-20!14;UBERON:0007687!3.82e-20!14;UBERON:0006554!1.95e-17!16;UBERON:0001008!2.55e-16!17;UBERON:0000489!8.13e-16!21;UBERON:0003103!8.26e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.72e-38,14;UBERON:0003918,2.72e-38,14;UBERON:0011143,2.72e-38,14;UBERON:0005095,2.72e-38,14;UBERON:0007687,2.72e-38,14;UBERON:0006554,7.75e-30,18;UBERON:0001008,2.81e-28,19;UBERON:0000489,1.33e-25,21;UBERON:0003103,1.52e-12,43;UBERON:0005172,5.25e-11,49;UBERON:0005173,5.25e-11,49;UBERON:0002417,5.25e-11,49;UBERON:0000916,5.25e-11,49;UBERON:0003104,7.92e-09,61;UBERON:0009142,7.92e-09,61;UBERON:0009569,3.76e-08,66;UBERON:0005177,8.74e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25415471346161,0.814605311381257,3.49114476901726,1.68325967736765,2.21327879934901,8.56138858281692,7.84993639206874,8.14421281883883,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p3@Clcnka}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12733 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=188bp_to_ENSMUST00000150334_5end | |||
|cluster_id=chr4:140950524..140950553,- | |||
|description=CAGE_peak_3_at_Clcnka_5end | |||
|id=chr4:140950524..140950553,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!3.82e-20!14;UBERON:0003918!3.82e-20!14;UBERON:0005095!3.82e-20!14;UBERON:0007687!3.82e-20!14;UBERON:0006554!1.95e-17!16;UBERON:0001008!2.55e-16!17;UBERON:0000489!8.13e-16!21;UBERON:0003103!8.26e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.72e-38,14;UBERON:0003918,2.72e-38,14;UBERON:0011143,2.72e-38,14;UBERON:0005095,2.72e-38,14;UBERON:0007687,2.72e-38,14;UBERON:0006554,7.75e-30,18;UBERON:0001008,2.81e-28,19;UBERON:0000489,1.33e-25,21;UBERON:0003103,1.52e-12,43;UBERON:0005172,5.25e-11,49;UBERON:0005173,5.25e-11,49;UBERON:0002417,5.25e-11,49;UBERON:0000916,5.25e-11,49;UBERON:0003104,7.92e-09,61;UBERON:0009142,7.92e-09,61;UBERON:0009569,3.76e-08,66;UBERON:0005177,8.74e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25415471346161,0.814605311381257,3.49114476901726,1.68325967736765,2.21327879934901,8.56138858281692,7.84993639206874,8.14421281883883,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p3@Clcnka | |||
}} |
Revision as of 02:11, 5 August 2015
Short description: | p3@Clcnka |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Clcnka_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 188bp_to_ENSMUST00000150334_5end |
EntrezGene: | 12733 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.72e-38 | 14 |
kidney mesenchyme | 2.72e-38 | 14 |
upper urinary tract | 2.72e-38 | 14 |
kidney rudiment | 2.72e-38 | 14 |
kidney field | 2.72e-38 | 14 |
urinary system structure | 7.75e-30 | 18 |
renal system | 2.81e-28 | 19 |
cavitated compound organ | 1.33e-25 | 21 |
compound organ | 1.52e-12 | 43 |
abdomen element | 5.25e-11 | 49 |
abdominal segment element | 5.25e-11 | 49 |
abdominal segment of trunk | 5.25e-11 | 49 |
abdomen | 5.25e-11 | 49 |
mesenchyme | 7.92e-09 | 61 |
entire embryonic mesenchyme | 7.92e-09 | 61 |
subdivision of trunk | 3.76e-08 | 66 |
trunk region element | 8.74e-07 | 79 |