FFCP PHASE1:Hg19::chr8:22446481..22446512,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64236 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13992 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-150bp_to_uc003xcd.1_5end | |||
|coexpression_cluster_id=C4124 | |||
|description=CAGE_peak_6_at_PDLIM2_5end | |||
|id=chr8:22446481..22446512,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.42e-13!180;CL:0000057!7.03e-10!75;CL:0002334!2.79e-09!12;CL:0000136!1.75e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.32e-16;13!CL:0002615;1.05e-14;3!CL:0002579;1.51e-14;3!CL:0002334;6.89e-13;12!CL:0002617;3.46e-10;2!CL:0000182;8.30e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.13e-14,3;CL:0002579,1.77e-14,3;CL:0000136,2.90e-14,15;CL:0002334,7.68e-13,12;CL:0002617,3.17e-10,2;CL:0000182,7.08e-09,12;CL:0000048,4.94e-07,427;CL:0000723,8.05e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;4.46e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,4.34e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004457!4.95e-10!12;UBERON:0000042!4.95e-10!12;UBERON:0003688!2.41e-09!6;UBERON:0002358!2.41e-09!6;UBERON:0003684!2.41e-09!6;UBERON:0001178!2.41e-09!6;UBERON:0000475!1.45e-08!365;UBERON:0001637!2.86e-07!42;UBERON:0003509!2.86e-07!42;UBERON:0004572!2.86e-07!42;UBERON:0000025!3.33e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.76e-27;6!UBERON:0002358;1.76e-27;6!UBERON:0003684;1.76e-27;6!UBERON:0001178;1.76e-27;6!UBERON:0004457;4.53e-24;9!UBERON:0000042;4.53e-24;9!UBERON:0005406;9.81e-10;2!UBERON:0002107;1.09e-07;19!UBERON:0006925;1.09e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.22e-27,6;UBERON:0002358,2.22e-27,6;UBERON:0003684,2.22e-27,6;UBERON:0001178,2.22e-27,6;UBERON:0004457,9.01e-18,12;UBERON:0000042,9.01e-18,12;UBERON:0005406,7.73e-10,2;UBERON:0002417,3.10e-08,60;UBERON:0000916,3.10e-08,60;UBERON:0002107,9.80e-08,19;UBERON:0006925,9.80e-08,19;UBERON:0008836,9.80e-08,19 | |||
|phase1_expression=11.2640595147745,2.5692062866918,25.6537015454667,5.00366491765652,4.02264984984559,4.36169262050184,7.59899634504932,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.53435074212236,0.722878304769133,1.50401373190767,1.01392563272577,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,1.13967460498122,0.662045904066094,0.286836620748814,0.354668382198357,2.80338800071154,1.06748995729705,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,1.5324389789951,0.150238058906597,0.226864366320042,0,0.640672166455702,0.423863802319124,0.300091096084402,0,0.257640540045629,1.11670113798954,0,0.0974370051611986,0,0.0920498986422993,0,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88751792667834,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0.860919069801795,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,1.73737568001095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.468565659970853,0.601892199455438,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,11.6610669674825,0.767309866440312,0.561320188866147,17.2987851495196,6.65219423786715,2.2519548960105,1.48418066444991,0.154209693802656,1.06537035187876,0.0821271560138091,0,0,0,0,0,0.574072240823034,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,4.18360994367557,0.62962469366128,0.6970372701606,0,0,1.73986598415015,0.18532421910392,0.858749320451947,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0,0,0.487426979262569,1.05650146756755,0.409499734223957,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0,0,0.811641507850816,0,0.281695602532241,0,0,1.78335525740625,0,1.26664581178598,0.987884678879706,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0.20453736500431,0,2.48831670129446,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,1.3269511191747,2.06883333267483,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0.31900115973192,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,3.24269895188163,0,2.36349546921671,2.47247575143499,1.95470277177136,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.732761168390412,0,0.129282956361551,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,0,0.251567901752575,0,0,0,0.15543720058278,0.591420599958536,0,0,0,0.829412415681711,0.53168342911599,1.04349012362347,0,0,0,0,0,0,0.398095888698616,0.800055529326307,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72407831176153,0,0,0,0.6124909547064,0.192687675289379,0,0,0.205116364240755,0.252071696221718,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.543757863814654,0.263091094251396,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.513314034281235,0,0,0.233939463462106,0.397901550322736,0,0,0,0,1.23478652972711,0.218559560503957,0,0,0,0,0,0,0.679708458751268,0.281951753939561,0,0,0,0,0,0,0,0,0.157771562193185,0.271965960763659,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@PDLIM2 | |||
}} |
Revision as of 21:06, 22 January 2014
Short description: | p6@PDLIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDLIM2_5end |
Coexpression cluster: | C4124_Adipocyte_Preadipocyte_Fibroblast_Ewing_basal_Smooth_neurofibroma |
Association with transcript: | -150bp_to_uc003xcd.1_5end |
EntrezGene: | PDLIM2 |
HGNC: | 13992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.13e-14 | 3 |
omentum preadipocyte | 1.77e-14 | 3 |
fat cell | 2.90e-14 | 15 |
preadipocyte | 7.68e-13 | 12 |
adipocyte of breast | 3.17e-10 | 2 |
hepatocyte | 7.08e-09 | 12 |
multi fate stem cell | 4.94e-07 | 427 |
somatic stem cell | 8.05e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.22e-27 | 6 |
peritoneum | 2.22e-27 | 6 |
abdominal cavity | 2.22e-27 | 6 |
visceral peritoneum | 2.22e-27 | 6 |
cavity lining | 9.01e-18 | 12 |
serous membrane | 9.01e-18 | 12 |
perirenal fat | 7.73e-10 | 2 |
abdominal segment of trunk | 3.10e-08 | 60 |
abdomen | 3.10e-08 | 60 |
liver | 9.80e-08 | 19 |
digestive gland | 9.80e-08 | 19 |
liver bud | 9.80e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 4.34e-07 | 3 |