FFCP PHASE1:Mm9::chr4:46053849..46053853,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=15|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:46053849..46053853,+|id=chr4:46053849..46053853,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,7.48e-11,3;CL:0002006,7.48e-11,3;CL:0002024,7.48e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!3.23e-09!6;UBERON:0004457!3.23e-09!6;UBERON:0000042!3.23e-09!6;UBERON:0004854!3.23e-09!6;UBERON:0009034!3.23e-09!6;UBERON:0002095!3.23e-09!6;UBERON:0004782!3.23e-09!6;UBERON:0003281!3.23e-09!6;UBERON:0009664!3.23e-09!6;UBERON:0002296!3.23e-09!6;UBERON:0005602!3.23e-09!6;UBERON:0001179!3.23e-09!6;UBERON:0006293!3.23e-09!6;UBERON:0003887!8.95e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.38e-15,49;UBERON:0005173,5.38e-15,49;UBERON:0002417,5.38e-15,49;UBERON:0000916,5.38e-15,49;UBERON:0002106,1.49e-14,6;UBERON:0004457,1.49e-14,6;UBERON:0000042,1.49e-14,6;UBERON:0004854,1.49e-14,6;UBERON:0009034,1.49e-14,6;UBERON:0002095,1.49e-14,6;UBERON:0004782,1.49e-14,6;UBERON:0003281,1.49e-14,6;UBERON:0009664,1.49e-14,6;UBERON:0002296,1.49e-14,6;UBERON:0005602,1.49e-14,6;UBERON:0001179,1.49e-14,6;UBERON:0006293,1.49e-14,6;UBERON:0002107,4.06e-14,22;UBERON:0007499,4.06e-14,22;UBERON:0006925,4.06e-14,22;UBERON:0009497,4.06e-14,22;UBERON:0000015,4.06e-14,22;UBERON:0002423,4.06e-14,22;UBERON:0006235,4.06e-14,22;UBERON:0008835,4.06e-14,22;UBERON:0003894,4.06e-14,22;UBERON:0004161,4.06e-14,22;UBERON:0008836,4.06e-14,22;UBERON:0009854,2.00e-13,23;UBERON:0009856,2.00e-13,23;UBERON:0002365,3.31e-12,25;UBERON:0002330,3.31e-12,25;UBERON:0009569,2.69e-10,66;UBERON:0005177,3.08e-09,79;UBERON:0003887,1.29e-08,10;UBERON:0003104,3.46e-08,61;UBERON:0009142,3.46e-08,61;UBERON:0000981,9.20e-08,4;UBERON:0003608,9.20e-08,4;UBERON:0003826,9.20e-08,4;UBERON:0008202,9.20e-08,4;UBERON:0004381,9.20e-08,4;UBERON:0007273,9.20e-08,4;UBERON:0010912,9.20e-08,4;UBERON:0002513,9.20e-08,4;UBERON:0004375,9.20e-08,4;UBERON:0010740,9.20e-08,4;UBERON:0010363,9.20e-08,4;UBERON:0003860,9.20e-08,4;UBERON:0002428,9.20e-08,4;UBERON:0010742,9.20e-08,4;UBERON:0002495,9.20e-08,4;UBERON:0003464,9.20e-08,4;UBERON:0003606,9.20e-08,4;UBERON:0005893,9.20e-08,4;UBERON:0009749,9.20e-08,4;UBERON:0010712,9.20e-08,4;UBERON:0010886,9.20e-08,4;UBERON:0005254,9.20e-08,4;UBERON:0010885,9.20e-08,4;UBERON:0010881,9.20e-08,4;UBERON:0010882,9.20e-08,4;UBERON:0007844,9.20e-08,4;UBERON:0001441,9.20e-08,4;UBERON:0011249,9.20e-08,4;UBERON:0002091,9.20e-08,4;UBERON:0003285,9.20e-08,4;UBERON:0004288,9.20e-08,4;UBERON:0010129,9.20e-08,4;UBERON:0006234,9.20e-08,4;UBERON:0002100,1.08e-07,90;UBERON:0005256,2.82e-07,45;UBERON:0001041,7.59e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,3.23960427823721,2.09868563438444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,1.38369298353635,0,0,0,0,0,1.76922110389975,0.323533699894818,1.10420759230197,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66952169145751,2.35870794135844,3.82265591054251,2.84004169943904,4.82354319504834,5.34714288740982,3.16465751195892,1.13494658742525,3.0201755450689,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0.206386867963223,1.29636169158798,3.95573759709851,5.33107488111998,4.57556346413045,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02440163452481,1.21553358534147,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,0,1.01391719956096,0.377252682772152,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.715308569841963,0.145346416632329,0.0941093804153306,0.0846146078916765,0.548783918618318,0.789209134313529,0.543216455383447,1.68342681497322,0.118635018124174,0.492522411877817,0,0.619747364743864,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr4:46053849..46053853,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:46053849..46053853,+ | |||
|description=CAGE_peak_at_chr4:46053849..46053853,+ | |||
|id=chr4:46053849..46053853,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,7.48e-11,3;CL:0002006,7.48e-11,3;CL:0002024,7.48e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.23e-09!6;UBERON:0004457!3.23e-09!6;UBERON:0000042!3.23e-09!6;UBERON:0004854!3.23e-09!6;UBERON:0009034!3.23e-09!6;UBERON:0002095!3.23e-09!6;UBERON:0004782!3.23e-09!6;UBERON:0003281!3.23e-09!6;UBERON:0009664!3.23e-09!6;UBERON:0002296!3.23e-09!6;UBERON:0005602!3.23e-09!6;UBERON:0001179!3.23e-09!6;UBERON:0006293!3.23e-09!6;UBERON:0003887!8.95e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.38e-15,49;UBERON:0005173,5.38e-15,49;UBERON:0002417,5.38e-15,49;UBERON:0000916,5.38e-15,49;UBERON:0002106,1.49e-14,6;UBERON:0004457,1.49e-14,6;UBERON:0000042,1.49e-14,6;UBERON:0004854,1.49e-14,6;UBERON:0009034,1.49e-14,6;UBERON:0002095,1.49e-14,6;UBERON:0004782,1.49e-14,6;UBERON:0003281,1.49e-14,6;UBERON:0009664,1.49e-14,6;UBERON:0002296,1.49e-14,6;UBERON:0005602,1.49e-14,6;UBERON:0001179,1.49e-14,6;UBERON:0006293,1.49e-14,6;UBERON:0002107,4.06e-14,22;UBERON:0007499,4.06e-14,22;UBERON:0006925,4.06e-14,22;UBERON:0009497,4.06e-14,22;UBERON:0000015,4.06e-14,22;UBERON:0002423,4.06e-14,22;UBERON:0006235,4.06e-14,22;UBERON:0008835,4.06e-14,22;UBERON:0003894,4.06e-14,22;UBERON:0004161,4.06e-14,22;UBERON:0008836,4.06e-14,22;UBERON:0009854,2.00e-13,23;UBERON:0009856,2.00e-13,23;UBERON:0002365,3.31e-12,25;UBERON:0002330,3.31e-12,25;UBERON:0009569,2.69e-10,66;UBERON:0005177,3.08e-09,79;UBERON:0003887,1.29e-08,10;UBERON:0003104,3.46e-08,61;UBERON:0009142,3.46e-08,61;UBERON:0000981,9.20e-08,4;UBERON:0003608,9.20e-08,4;UBERON:0003826,9.20e-08,4;UBERON:0008202,9.20e-08,4;UBERON:0004381,9.20e-08,4;UBERON:0007273,9.20e-08,4;UBERON:0010912,9.20e-08,4;UBERON:0002513,9.20e-08,4;UBERON:0004375,9.20e-08,4;UBERON:0010740,9.20e-08,4;UBERON:0010363,9.20e-08,4;UBERON:0003860,9.20e-08,4;UBERON:0002428,9.20e-08,4;UBERON:0010742,9.20e-08,4;UBERON:0002495,9.20e-08,4;UBERON:0003464,9.20e-08,4;UBERON:0003606,9.20e-08,4;UBERON:0005893,9.20e-08,4;UBERON:0009749,9.20e-08,4;UBERON:0010712,9.20e-08,4;UBERON:0010886,9.20e-08,4;UBERON:0005254,9.20e-08,4;UBERON:0010885,9.20e-08,4;UBERON:0010881,9.20e-08,4;UBERON:0010882,9.20e-08,4;UBERON:0007844,9.20e-08,4;UBERON:0001441,9.20e-08,4;UBERON:0011249,9.20e-08,4;UBERON:0002091,9.20e-08,4;UBERON:0003285,9.20e-08,4;UBERON:0004288,9.20e-08,4;UBERON:0010129,9.20e-08,4;UBERON:0006234,9.20e-08,4;UBERON:0002100,1.08e-07,90;UBERON:0005256,2.82e-07,45;UBERON:0001041,7.59e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,3.23960427823721,2.09868563438444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,1.38369298353635,0,0,0,0,0,1.76922110389975,0.323533699894818,1.10420759230197,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66952169145751,2.35870794135844,3.82265591054251,2.84004169943904,4.82354319504834,5.34714288740982,3.16465751195892,1.13494658742525,3.0201755450689,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0.206386867963223,1.29636169158798,3.95573759709851,5.33107488111998,4.57556346413045,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02440163452481,1.21553358534147,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,0,1.01391719956096,0.377252682772152,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.715308569841963,0.145346416632329,0.0941093804153306,0.0846146078916765,0.548783918618318,0.789209134313529,0.543216455383447,1.68342681497322,0.118635018124174,0.492522411877817,0,0.619747364743864,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr4:46053849..46053853,+ | |||
}} |
Latest revision as of 12:51, 5 August 2015
Short description: | p@chr4:46053849..46053853, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:46053849..46053853, + |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 7.48e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.48e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.48e-11 | 3 |