FFCP PHASE1:Mm9::chr5:139801711..139801722,-: Difference between revisions
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{{FFCP|EntrezGene=231821|HGNC=|MCL_coexpression_id=240|UniProt=E9PY16|association_with_transcript=-135bp_to_ENSMUST00000110865_5end|description=CAGE_peak_6_at_Adap1_5end|id=chr5:139801711..139801722,-|ontology_enrichment_celltype=CL:0000117!7.06e-07!23;CL:0000337!7.06e-07!23|ontology_enrichment_celltype_v019_2=CL:0000239,4.50e-11,6;CL:0000677,4.50e-11,6;CL:0000584,4.50e-11,6;CL:0000075,2.49e-09,7;CL:0002563,5.18e-07,9;CL:0002251,5.18e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.56e-09!34;UBERON:0004923!7.67e-09!24;UBERON:0001049!7.74e-09!52;UBERON:0005068!7.74e-09!52;UBERON:0006241!7.74e-09!52;UBERON:0007135!7.74e-09!52;UBERON:0001017!1.33e-08!73;UBERON:0005743!1.33e-08!73;UBERON:0000073!3.32e-08!75;UBERON:0001016!3.32e-08!75;UBERON:0000344!3.44e-08!15;UBERON:0000955!4.22e-08!50;UBERON:0006238!4.22e-08!50;UBERON:0002616!6.23e-08!49;UBERON:0002791!4.92e-07!29;UBERON:0003528!4.92e-07!29;UBERON:0001893!4.92e-07!29;UBERON:0001242!5.98e-07!13;UBERON:0000060!5.98e-07!13;UBERON:0001262!5.98e-07!13;UBERON:0004786!5.98e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.66e-15,31;UBERON:0000344,1.76e-12,15;UBERON:0002021,3.41e-12,10;UBERON:0000411,3.41e-12,10;UBERON:0001950,3.41e-12,10;UBERON:0001242,5.66e-10,13;UBERON:0001262,5.66e-10,13;UBERON:0004786,5.66e-10,13;UBERON:0000073,5.51e-08,54;UBERON:0005409,5.66e-08,47;UBERON:0004923,7.14e-08,24;UBERON:0003350,5.18e-07,9;UBERON:0004808,5.18e-07,9;UBERON:0001277,5.18e-07,9|phase1_expression=0,8.02643437570531,10.4649825059593,5.74682001482977,5.50985302940982,3.3575854382378,3.27057696833736,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0.261199789138935,2.71987118748791,3.21172993494038,8.6134794617253,10.3382879078178,5.17130958446134,0.570070258369122,2.01624103807945,3.76941868114018,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.204169356262369,1.25559489221072,0.7813353445238,0.523523743973798,0.588231488031014,0,2.42755176515577,0.125896817975577,0.405507724878058,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,1.3498495759221,5.93319817540185,2.8419204597844,0.898800331555214,0.768436610643109,0.207379224616955,0,0,0.571301968807607,1.54607978666129,0.122490799214954,0.191690942036473,0.919218786610021,2.20231761998777,0.638436690425939,1.38245879930619,0.923204014111357,0.914876436024097,0.52091337055676,1.11673199600552,1.68828783009504,0.61119299110724,1.17851434189467,1.28134512719193,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,0,0.304465478312141,0,0,0,0.628332956648377,0.741584903203122,0,0,0,0,0,0,1.75668478206928,2.72280718857492,3.32094171771169,0.838705871541442,1.19980546198682,0.889491589511453,1.49790639404823,0.457500602818626,0.753926112677186,0.695297280769106,1.79000820131231,1.45451631191692,1.46017136760982,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,0.411618449517138,6.93879444265976,3.96675849995316,0,0,0,0.403367049246685,0,0.190225626112559,2.37264530772256,1.81168850196412,1.00534083520108,0.596869416123452,1.16978452271472,1.79763881730844,1.08069024937347,2.19055400579804,0,0,0,0,0,0.0701358198903186,0,0,0.470996183524124,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.144649058581512,4.52373851817817,3.26343410291226,0,0,1.44495530989013,0.468846746368813,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.469343416127421,1.0591603543191,0.220528398054962,0,0,0.180938774784468,0.119372344003136,0.164140899745061,4.66369338607761,0.556275906031529,0.341741761595705,0.206386867963223,0.370389054739423,0.565105371014073,0,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0.428736758158132,0,2.82375921308533,2.76195141904306,3.43737308063638,3.26521046453006,0,1.5107877947794,4.72515750162264,3.60256962579376,2.26571204492102,2.5888015587591,0,0,0,0,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0.882365676478062,0.231867835620421|short_description=p6@Adap1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:231821 | |||
|HGNC= | |||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PY16 | |||
|association_with_transcript=-135bp_to_ENSMUST00000110865_5end | |||
|cluster_id=chr5:139801711..139801722,- | |||
|description=CAGE_peak_6_at_Adap1_5end | |||
|id=chr5:139801711..139801722,- | |||
|ontology_enrichment_celltype=CL:0000117!7.06e-07!23;CL:0000337!7.06e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.50e-11,6;CL:0000677,4.50e-11,6;CL:0000584,4.50e-11,6;CL:0000075,2.49e-09,7;CL:0002563,5.18e-07,9;CL:0002251,5.18e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.56e-09!34;UBERON:0004923!7.67e-09!24;UBERON:0001049!7.74e-09!52;UBERON:0005068!7.74e-09!52;UBERON:0006241!7.74e-09!52;UBERON:0007135!7.74e-09!52;UBERON:0001017!1.33e-08!73;UBERON:0005743!1.33e-08!73;UBERON:0000073!3.32e-08!75;UBERON:0001016!3.32e-08!75;UBERON:0000344!3.44e-08!15;UBERON:0000955!4.22e-08!50;UBERON:0006238!4.22e-08!50;UBERON:0002616!6.23e-08!49;UBERON:0002791!4.92e-07!29;UBERON:0003528!4.92e-07!29;UBERON:0001893!4.92e-07!29;UBERON:0001242!5.98e-07!13;UBERON:0000060!5.98e-07!13;UBERON:0001262!5.98e-07!13;UBERON:0004786!5.98e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.66e-15,31;UBERON:0000344,1.76e-12,15;UBERON:0002021,3.41e-12,10;UBERON:0000411,3.41e-12,10;UBERON:0001950,3.41e-12,10;UBERON:0001242,5.66e-10,13;UBERON:0001262,5.66e-10,13;UBERON:0004786,5.66e-10,13;UBERON:0000073,5.51e-08,54;UBERON:0005409,5.66e-08,47;UBERON:0004923,7.14e-08,24;UBERON:0003350,5.18e-07,9;UBERON:0004808,5.18e-07,9;UBERON:0001277,5.18e-07,9 | |||
|phase1_expression=0,8.02643437570531,10.4649825059593,5.74682001482977,5.50985302940982,3.3575854382378,3.27057696833736,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0.261199789138935,2.71987118748791,3.21172993494038,8.6134794617253,10.3382879078178,5.17130958446134,0.570070258369122,2.01624103807945,3.76941868114018,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.204169356262369,1.25559489221072,0.7813353445238,0.523523743973798,0.588231488031014,0,2.42755176515577,0.125896817975577,0.405507724878058,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,1.3498495759221,5.93319817540185,2.8419204597844,0.898800331555214,0.768436610643109,0.207379224616955,0,0,0.571301968807607,1.54607978666129,0.122490799214954,0.191690942036473,0.919218786610021,2.20231761998777,0.638436690425939,1.38245879930619,0.923204014111357,0.914876436024097,0.52091337055676,1.11673199600552,1.68828783009504,0.61119299110724,1.17851434189467,1.28134512719193,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,0,0.304465478312141,0,0,0,0.628332956648377,0.741584903203122,0,0,0,0,0,0,1.75668478206928,2.72280718857492,3.32094171771169,0.838705871541442,1.19980546198682,0.889491589511453,1.49790639404823,0.457500602818626,0.753926112677186,0.695297280769106,1.79000820131231,1.45451631191692,1.46017136760982,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,0.411618449517138,6.93879444265976,3.96675849995316,0,0,0,0.403367049246685,0,0.190225626112559,2.37264530772256,1.81168850196412,1.00534083520108,0.596869416123452,1.16978452271472,1.79763881730844,1.08069024937347,2.19055400579804,0,0,0,0,0,0.0701358198903186,0,0,0.470996183524124,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.144649058581512,4.52373851817817,3.26343410291226,0,0,1.44495530989013,0.468846746368813,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.469343416127421,1.0591603543191,0.220528398054962,0,0,0.180938774784468,0.119372344003136,0.164140899745061,4.66369338607761,0.556275906031529,0.341741761595705,0.206386867963223,0.370389054739423,0.565105371014073,0,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0.428736758158132,0,2.82375921308533,2.76195141904306,3.43737308063638,3.26521046453006,0,1.5107877947794,4.72515750162264,3.60256962579376,2.26571204492102,2.5888015587591,0,0,0,0,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0.882365676478062,0.231867835620421 | |||
|short_description=p6@Adap1 | |||
}} |
Revision as of 22:56, 3 August 2015
Short description: | p6@Adap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Adap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | -135bp_to_ENSMUST00000110865_5end |
EntrezGene: | 231821 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.50e-11 | 6 |
gut absorptive cell | 4.50e-11 | 6 |
enterocyte | 4.50e-11 | 6 |
columnar/cuboidal epithelial cell | 2.49e-09 | 7 |
intestinal epithelial cell | 5.18e-07 | 9 |
epithelial cell of alimentary canal | 5.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.66e-15 | 31 |
mucosa | 1.76e-12 | 15 |
occipital lobe | 3.41e-12 | 10 |
visual cortex | 3.41e-12 | 10 |
neocortex | 3.41e-12 | 10 |
intestinal mucosa | 5.66e-10 | 13 |
wall of intestine | 5.66e-10 | 13 |
gastrointestinal system mucosa | 5.66e-10 | 13 |
regional part of nervous system | 5.51e-08 | 54 |
gastrointestinal system | 5.66e-08 | 47 |
organ component layer | 7.14e-08 | 24 |
epithelium of mucosa | 5.18e-07 | 9 |
gastrointestinal system epithelium | 5.18e-07 | 9 |
intestinal epithelium | 5.18e-07 | 9 |