FFCP PHASE1:Mm9::chr7:144505906..144505913,-: Difference between revisions
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{{FFCP|EntrezGene=13593|HGNC=|MCL_coexpression_id=618|UniProt=Q6NXL3|association_with_transcript=183bp_to_ENSMUST00000168203_5end|description=CAGE_peak_7_at_Ebf3_5end|id=chr7:144505906..144505913,-|ontology_enrichment_celltype=CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23;CL:0000540!7.29e-07!33;CL:0000047!7.29e-07!33;CL:0000031!7.29e-07!33;CL:0000404!7.29e-07!33|ontology_enrichment_celltype_v019_2=CL:0000120,1.11e-21,3;CL:0002612,1.11e-21,3;CL:0000117,1.19e-18,23;CL:0000337,1.19e-18,23;CL:0000540,8.41e-13,33;CL:0000047,8.41e-13,33;CL:0000031,8.41e-13,33;CL:0000404,8.41e-13,33;CL:0000393,1.01e-10,39;CL:0000211,1.01e-10,39;CL:0002319,1.17e-09,43;CL:0000221,2.02e-09,44;CL:0000133,2.02e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!1.99e-07!6;UBERON:0005174!1.99e-07!6;UBERON:0001137!1.99e-07!6;UBERON:0001948!3.90e-07!5;UBERON:0002315!3.90e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.59e-22,5;UBERON:0002315,1.59e-22,5;UBERON:0002257,1.11e-21,3;UBERON:0002240,7.83e-19,6;UBERON:0005174,7.83e-19,6;UBERON:0001137,7.83e-19,6;UBERON:0003076,1.47e-09,12;UBERON:0003057,1.47e-09,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,2.63011399117477,9.52183762689659,5.07065122804943,0,0,0,0,0,0,0,0,0.135005938331691,0,0.856952953211411,1.98781686856452,0,0,0,0,0.383062014255563,0.46081959976873,1.71452174049252,0.914876436024097,0.52091337055676,0,0.56276261003168,0,3.53554302568401,3.98640706237488,7.45597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.599162557619291,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0.130120442962704,0,1.0803727788321,0.30140963567143,0.408218994907967,0.12811372028485,0.374806898238915,0,0.215567992932842,3.21480336285293,0.703804496655795,0.876782929710299,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.19707462020309,1.02440163452481,0.729320151204882,0,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,1.01078884705519,0,0.188626341386076,0.0936415074698824,0.512201219238954,0.229741875822453,0,0.463537303779422,0,0.824171801606613,0.441596760403192,0.685738504770831,0,0.476872379894642,0.872078499793971,0,0.592302255241736,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.749431733813838,0.701794825336225,0,0.765153328275374,0.661774257358546,0|short_description=p7@Ebf3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13593 | |||
|HGNC= | |||
|MCL_coexpression_id=618 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NXL3 | |||
|association_with_transcript=183bp_to_ENSMUST00000168203_5end | |||
|cluster_id=chr7:144505906..144505913,- | |||
|description=CAGE_peak_7_at_Ebf3_5end | |||
|id=chr7:144505906..144505913,- | |||
|ontology_enrichment_celltype=CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23;CL:0000540!7.29e-07!33;CL:0000047!7.29e-07!33;CL:0000031!7.29e-07!33;CL:0000404!7.29e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,1.11e-21,3;CL:0002612,1.11e-21,3;CL:0000117,1.19e-18,23;CL:0000337,1.19e-18,23;CL:0000540,8.41e-13,33;CL:0000047,8.41e-13,33;CL:0000031,8.41e-13,33;CL:0000404,8.41e-13,33;CL:0000393,1.01e-10,39;CL:0000211,1.01e-10,39;CL:0002319,1.17e-09,43;CL:0000221,2.02e-09,44;CL:0000133,2.02e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.99e-07!6;UBERON:0005174!1.99e-07!6;UBERON:0001137!1.99e-07!6;UBERON:0001948!3.90e-07!5;UBERON:0002315!3.90e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.59e-22,5;UBERON:0002315,1.59e-22,5;UBERON:0002257,1.11e-21,3;UBERON:0002240,7.83e-19,6;UBERON:0005174,7.83e-19,6;UBERON:0001137,7.83e-19,6;UBERON:0003076,1.47e-09,12;UBERON:0003057,1.47e-09,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,2.63011399117477,9.52183762689659,5.07065122804943,0,0,0,0,0,0,0,0,0.135005938331691,0,0.856952953211411,1.98781686856452,0,0,0,0,0.383062014255563,0.46081959976873,1.71452174049252,0.914876436024097,0.52091337055676,0,0.56276261003168,0,3.53554302568401,3.98640706237488,7.45597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.599162557619291,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0.130120442962704,0,1.0803727788321,0.30140963567143,0.408218994907967,0.12811372028485,0.374806898238915,0,0.215567992932842,3.21480336285293,0.703804496655795,0.876782929710299,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.19707462020309,1.02440163452481,0.729320151204882,0,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,1.01078884705519,0,0.188626341386076,0.0936415074698824,0.512201219238954,0.229741875822453,0,0.463537303779422,0,0.824171801606613,0.441596760403192,0.685738504770831,0,0.476872379894642,0.872078499793971,0,0.592302255241736,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.749431733813838,0.701794825336225,0,0.765153328275374,0.661774257358546,0 | |||
|short_description=p7@Ebf3 | |||
}} |
Revision as of 10:43, 4 August 2015
Short description: | p7@Ebf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ebf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:618 |
Association with transcript: | 183bp_to_ENSMUST00000168203_5end |
EntrezGene: | 13593 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 1.11e-21 | 3 |
neuron of the ventral spinal cord | 1.11e-21 | 3 |
CNS neuron (sensu Vertebrata) | 1.19e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-18 | 23 |
neuron | 8.41e-13 | 33 |
neuronal stem cell | 8.41e-13 | 33 |
neuroblast | 8.41e-13 | 33 |
electrically signaling cell | 8.41e-13 | 33 |
electrically responsive cell | 1.01e-10 | 39 |
electrically active cell | 1.01e-10 | 39 |
neural cell | 1.17e-09 | 43 |
ectodermal cell | 2.02e-09 | 44 |
neurectodermal cell | 2.02e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.59e-22 | 5 |
gray matter of spinal cord | 1.59e-22 | 5 |
ventral horn of spinal cord | 1.11e-21 | 3 |
spinal cord | 7.83e-19 | 6 |
dorsal region element | 7.83e-19 | 6 |
dorsum | 7.83e-19 | 6 |
posterior neural tube | 1.47e-09 | 12 |
chordal neural plate | 1.47e-09 | 12 |