FFCP PHASE1:Mm9::chr8:87297706..87297711,-: Difference between revisions
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{{FFCP|EntrezGene=18032|HGNC=|UniProt=E9PUH7|association_with_transcript=-411bp_to_ENSMUST00000109764_5end|description=CAGE_peak_19_at_Nfix_5end|id=chr8:87297706..87297711,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,9.20e-20,8;CL:0000333,6.60e-16,10;CL:0000095,6.60e-16,10;CL:0000243,6.60e-16,10;CL:0000123,6.60e-16,10;CL:0000125,6.60e-16,10;CL:0000030,6.60e-16,10;CL:0000339,6.60e-16,10;CL:0000128,4.37e-15,6;CL:0000126,4.37e-15,6;CL:0000127,4.37e-15,6;CL:0002319,3.32e-08,43;CL:0000221,5.13e-08,44;CL:0000133,5.13e-08,44;CL:0002609,1.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.44e-08!73;UBERON:0005743!4.44e-08!73;UBERON:0001049!5.76e-08!52;UBERON:0005068!5.76e-08!52;UBERON:0006241!5.76e-08!52;UBERON:0007135!5.76e-08!52;UBERON:0002616!1.01e-07!49;UBERON:0000073!1.68e-07!75;UBERON:0001016!1.68e-07!75;UBERON:0000955!2.32e-07!50;UBERON:0006238!2.32e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0000956,8.86e-12,21;UBERON:0001869,8.86e-12,21;UBERON:0000203,8.86e-12,21;UBERON:0003528,1.45e-08,29;UBERON:0002791,1.45e-08,29;UBERON:0001893,1.45e-08,29;UBERON:0001017,2.64e-08,73;UBERON:0001016,4.49e-08,75;UBERON:0002616,1.45e-07,46;UBERON:0000955,2.12e-07,47;UBERON:0006238,2.12e-07,47;UBERON:0002020,2.56e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,0,1.09012578190223,0.878744730937887,1.1665793944457,0.699932108126813,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.53687322128622,1.55534418462716,1.75507719831198,0.841299845405528,0,0,0.122490799214954,0.0958454710182364,0,0,0.510749352340751,0.307213066512487,0,0.365950574409639,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0.649776417447669,0,0,0.340860645156116,0,0.70667914902068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0.329119699826961,0,0,0,0,0.134206418760372,0.420579897128254,0.823236899034275,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0.664394068946325,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.234423373184406,0.491804836130026,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0.8244312647074,0,0.0603129249281559,0,0.164140899745061,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0.343706364687375,1.37016503954128,0,0,0.45032120322422,0,1.03552062350364,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0.37456602987953,0.256100609619477,0.34461281373368,1.42888107384922,0.231768651889711,0.192909220463705,0.412085900803307,0,0.685738504770831,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0.441182838239031,0|short_description=p19@Nfix}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18032 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PUH7 | |||
|association_with_transcript=-411bp_to_ENSMUST00000109764_5end | |||
|cluster_id=chr8:87297706..87297711,- | |||
|description=CAGE_peak_19_at_Nfix_5end | |||
|id=chr8:87297706..87297711,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.20e-20,8;CL:0000333,6.60e-16,10;CL:0000095,6.60e-16,10;CL:0000243,6.60e-16,10;CL:0000123,6.60e-16,10;CL:0000125,6.60e-16,10;CL:0000030,6.60e-16,10;CL:0000339,6.60e-16,10;CL:0000128,4.37e-15,6;CL:0000126,4.37e-15,6;CL:0000127,4.37e-15,6;CL:0002319,3.32e-08,43;CL:0000221,5.13e-08,44;CL:0000133,5.13e-08,44;CL:0002609,1.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.44e-08!73;UBERON:0005743!4.44e-08!73;UBERON:0001049!5.76e-08!52;UBERON:0005068!5.76e-08!52;UBERON:0006241!5.76e-08!52;UBERON:0007135!5.76e-08!52;UBERON:0002616!1.01e-07!49;UBERON:0000073!1.68e-07!75;UBERON:0001016!1.68e-07!75;UBERON:0000955!2.32e-07!50;UBERON:0006238!2.32e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,8.86e-12,21;UBERON:0001869,8.86e-12,21;UBERON:0000203,8.86e-12,21;UBERON:0003528,1.45e-08,29;UBERON:0002791,1.45e-08,29;UBERON:0001893,1.45e-08,29;UBERON:0001017,2.64e-08,73;UBERON:0001016,4.49e-08,75;UBERON:0002616,1.45e-07,46;UBERON:0000955,2.12e-07,47;UBERON:0006238,2.12e-07,47;UBERON:0002020,2.56e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,0,1.09012578190223,0.878744730937887,1.1665793944457,0.699932108126813,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.53687322128622,1.55534418462716,1.75507719831198,0.841299845405528,0,0,0.122490799214954,0.0958454710182364,0,0,0.510749352340751,0.307213066512487,0,0.365950574409639,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0.649776417447669,0,0,0.340860645156116,0,0.70667914902068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0,0.329119699826961,0,0,0,0,0.134206418760372,0.420579897128254,0.823236899034275,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0.664394068946325,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.234423373184406,0.491804836130026,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0.8244312647074,0,0.0603129249281559,0,0.164140899745061,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0.343706364687375,1.37016503954128,0,0,0.45032120322422,0,1.03552062350364,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0.37456602987953,0.256100609619477,0.34461281373368,1.42888107384922,0.231768651889711,0.192909220463705,0.412085900803307,0,0.685738504770831,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0.441182838239031,0 | |||
|short_description=p19@Nfix | |||
}} |
Revision as of 06:09, 4 August 2015
Short description: | p19@Nfix |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Nfix_5end |
Coexpression cluster: | NA |
Association with transcript: | -411bp_to_ENSMUST00000109764_5end |
EntrezGene: | 18032 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.20e-20 | 8 |
migratory neural crest cell | 6.60e-16 | 10 |
neuron associated cell | 6.60e-16 | 10 |
glial cell (sensu Vertebrata) | 6.60e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 6.60e-16 | 10 |
glial cell | 6.60e-16 | 10 |
glioblast | 6.60e-16 | 10 |
glioblast (sensu Vertebrata) | 6.60e-16 | 10 |
oligodendrocyte | 4.37e-15 | 6 |
macroglial cell | 4.37e-15 | 6 |
astrocyte | 4.37e-15 | 6 |
neural cell | 3.32e-08 | 43 |
ectodermal cell | 5.13e-08 | 44 |
neurectodermal cell | 5.13e-08 | 44 |
neuron of cerebral cortex | 1.12e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 8.86e-12 | 21 |
cerebral hemisphere | 8.86e-12 | 21 |
pallium | 8.86e-12 | 21 |
brain grey matter | 1.45e-08 | 29 |
regional part of telencephalon | 1.45e-08 | 29 |
telencephalon | 1.45e-08 | 29 |
central nervous system | 2.64e-08 | 73 |
nervous system | 4.49e-08 | 75 |
regional part of brain | 1.45e-07 | 46 |
brain | 2.12e-07 | 47 |
future brain | 2.12e-07 | 47 |
gray matter | 2.56e-07 | 34 |