FFCP PHASE1:Hg19::chr2:113816221..113816244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=26525 | |EntrezGene=entrezgene:26525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=15561 | |HGNC=HGNC:15561 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9UBH0 | |UniProt=uniprot:Q9UBH0 | ||
|association_with_transcript=6bp_to_ENST00000346807,NM_173170,uc002tis.2_5end | |association_with_transcript=6bp_to_ENST00000346807,NM_173170,uc002tis.2_5end | ||
|cluster_id=chr2:113816221..113816244,+ | |||
|description=CAGE_peak_2_at_IL36RN_5end | |description=CAGE_peak_2_at_IL36RN_5end | ||
|id=chr2:113816221..113816244,+ | |id=chr2:113816221..113816244,+ | ||
Revision as of 23:31, 28 July 2015
| Short description: | p2@IL36RN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_IL36RN_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 6bp_to_ENST00000346807, NM_173170, uc002tis.2_5end |
| EntrezGene: | 26525 |
| HGNC: | 15561 |
| UniProt: | Q9UBH0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@IL36RN |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic cell | 1.00e-23 | 19 |
| placental epithelial cell | 7.56e-18 | 3 |
| transitional epithelial cell | 1.97e-13 | 4 |
| urothelial cell | 1.97e-13 | 4 |
| amniotic epithelial cell | 7.54e-13 | 2 |
| corneal epithelial cell | 1.21e-12 | 2 |
| amnion mesenchymal stem cell | 1.29e-11 | 5 |
| germ line cell | 1.97e-08 | 7 |
| germ cell | 1.97e-08 | 7 |
| epithelial cell of esophagus | 4.85e-07 | 1 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 2.43e-40 | 14 |
| membranous layer | 2.43e-40 | 14 |
| placenta | 2.89e-23 | 4 |
| allantois | 2.89e-23 | 4 |
| extraembryonic structure | 8.75e-23 | 24 |
| amnion | 1.93e-21 | 7 |
| chorion | 1.52e-20 | 7 |
| somatic layer of lateral plate mesoderm | 9.74e-19 | 8 |
| urothelium | 7.54e-11 | 5 |
| organ component layer | 2.44e-10 | 66 |
Showing 1 to 10 of 24 entries
| Ontology term | p-value | n |
|---|---|---|
| islet cell tumor | 2.67e-07 | 1 |
| endocrine pancreas cancer | 2.67e-07 | 1 |
| pancreatic endocrine carcinoma | 2.67e-07 | 1 |
| pancreatic cancer | 6.32e-07 | 4 |
| vascular disease | 8.67e-07 | 1 |
| ischemia | 8.67e-07 | 1 |
| extrinsic cardiomyopathy | 8.67e-07 | 1 |
| myocardial ischemia | 8.67e-07 | 1 |
| myocardial infarction | 8.67e-07 | 1 |
Showing 1 to 9 of 9 entries
