FFCP PHASE1:Hg19::chr9:100615546..100615558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2304 | |EntrezGene=entrezgene:2304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3806 | |HGNC=HGNC:3806 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=O00358 | |UniProt=uniprot:O00358 | ||
|association_with_transcript=9bp_to_NM_004473,uc004axu.2_5end | |association_with_transcript=9bp_to_NM_004473,uc004axu.2_5end | ||
|cluster_id=chr9:100615546..100615558,+ | |||
|coexpression_cluster_id=C113 | |coexpression_cluster_id=C113 | ||
|description=CAGE_peak_4_at_FOXE1_5end | |description=CAGE_peak_4_at_FOXE1_5end |
Revision as of 21:00, 31 July 2015
Short description: | p4@FOXE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXE1_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 9bp_to_NM_004473, uc004axu.2_5end |
EntrezGene: | 2304 |
HGNC: | 3806 |
UniProt: | O00358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@FOXE1 |
---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.23e-07 | 1 |
seminiferous tubule epithelial cell | 2.23e-07 | 1 |
Sertoli cell | 2.23e-07 | 1 |
buccal mucosa cell | 3.62e-07 | 1 |
endothelial cell of viscerocranial mucosa | 3.62e-07 | 1 |
keratinized cell of the oral mucosa | 3.62e-07 | 1 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
larynx | 6.65e-41 | 9 |
upper respiratory tract | 3.04e-29 | 19 |
thyroid gland | 6.55e-20 | 5 |
pharyngeal pouch | 6.55e-20 | 5 |
thyroid diverticulum | 6.55e-20 | 5 |
pharyngeal pouch 2 | 6.55e-20 | 5 |
thyroid primordium | 6.55e-20 | 5 |
throat | 1.77e-13 | 2 |
segment of respiratory tract | 3.43e-13 | 47 |
respiratory system | 1.03e-12 | 74 |
Showing 1 to 10 of 39 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.90e-11 | 106 |
squamous cell carcinoma | 1.57e-10 | 14 |
cell type cancer | 1.25e-09 | 143 |
peripheral primitive neuroectodermal tumor | 1.12e-07 | 1 |
skin squamous cell carcinoma | 1.54e-07 | 1 |
keratoacanthoma | 1.54e-07 | 1 |
liver cancer | 6.20e-07 | 1 |
Showing 1 to 7 of 7 entries