FFCP PHASE1:Hg19::chr9:136465213..136465223,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:136465213..136465223,- | |||
|coexpression_cluster_id=C2939 | |coexpression_cluster_id=C2939 | ||
|description=CAGE_peak_at_chr9:136465213..136465223,- | |description=CAGE_peak_at_chr9:136465213..136465223,- |
Latest revision as of 23:59, 31 July 2015
Short description: | p@chr9:136465213..136465223, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:136465213..136465223, - |
Coexpression cluster: | C2939_neuroblastoma_middle_occipital_parietal_medial_olfactory_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr9:136465213..136465223- |
---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 7.84e-20 | 6 |
middle temporal gyrus | 6.48e-18 | 2 |
neocortex | 6.53e-15 | 20 |
regional part of cerebral cortex | 1.10e-13 | 22 |
cerebral cortex | 3.38e-12 | 25 |
pallium | 3.38e-12 | 25 |
regional part of telencephalon | 9.04e-10 | 32 |
cerebral hemisphere | 9.04e-10 | 32 |
brain grey matter | 2.97e-09 | 34 |
gray matter | 2.97e-09 | 34 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.25e-14 | 10 |
germ cell and embryonal cancer | 5.40e-07 | 22 |
germ cell cancer | 5.40e-07 | 22 |
neuroendocrine tumor | 7.17e-07 | 6 |
Showing 1 to 4 of 4 entries