UBERON:0000020: Difference between revisions
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|located_in= | |located_in= | ||
|name=sense organ | |name=sense organ | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001032 | |part_of=UBERON:0001032 | ||
Latest revision as of 17:04, 12 September 2014
| Name: | sense organ | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An organ that is part of a sense organ system." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: |
"organ of sense organ system" EXACT [OBOL:automatic] "organ of sensory organ system" EXACT [OBOL:automatic] "organ of sensory system" EXACT [OBOL:automatic] "sense organ system organ" EXACT [OBOL:automatic] "sensillum" NARROW [WBbt:0006929] "sensor" RELATED [] "sensory organ" EXACT [] "sensory organ system organ" EXACT [OBOL:automatic] "sensory system organ" EXACT [OBOL:automatic] "Sinnesorgan" RELATED [BTO:0000202] | ||
| Subset: | uberon_slim |
200px-Gray722.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000062(organ) |
|---|---|
| part_of: | UBERON:0001032(sensory system) |
Children
| is a: | UBERON:0000970 (eye),UBERON:0001690 (ear),UBERON:0001723 (tongue),UBERON:0002227 (spiral organ of cochlea),UBERON:0002268 (olfactory organ),UBERON:0004637 (otic capsule),UBERON:0010230 (eyeball of camera-type eye) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10030-101E3 (retina, adult, pool1)
- 10054-101G9 (eye, fetal, donor1)
- 10059-101H5 (tongue, fetal, donor1)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10275-104E5
... further results Mouse (Mus musculus)
- 10030-101E3 (retina, adult, pool1)
- 10054-101G9 (eye, fetal, donor1)
- 10059-101H5 (tongue, fetal, donor1)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10275-104E5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000020 (sense organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.42e-69 | FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_307f254ee2c7ea454828e9ec745386b9 | p10@SIX3 |
| 4.42e-69 | FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_307f254ee2c7ea454828e9ec745386b9 | p10@SIX3 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr17:31815126..31815139, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p5@Zfp365 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr11:77532283..77532316, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p1@Mir184 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr16:21743134..21743139, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p8@Osbp2 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr3:129525389..129525400, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr17:31815126..31815139, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:5876195..5876219,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr11:5876195..5876219, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr17:31818106..31818119, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr3:129525389..129525400, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:5876195..5876219,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr11:5876195..5876219, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr17:31817987..31818013, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr17:31818263..31818276, + |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p3@Osbp2 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p4@Dct |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr11:77532391..77532408, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p4@Dct |
| 5.33e-65 | FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr17:31817987..31818013, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p1@Mir184 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p6@Celf1 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p8@Osbp2 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p6@Celf1 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr10:127668442..127668453, + |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr11:77532391..77532408, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr17:31818106..31818119, + |
| 5.33e-65 | FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr10:127668442..127668453, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p5@Zfp365 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p3@Osbp2 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p1@E130218I03Rik |
| 5.33e-65 | FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr17:31818263..31818276, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr11:77532283..77532316, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_3e8ed763c6bdc0e31bd24fc54536d581 | p@chr16:21743134..21743139, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_3e8ed763c6bdc0e31bd24fc54536d581 | p1@E130218I03Rik |
| 7.33e-60 | FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_7487f95bebf004314f7491e4e7567fad | p1@ENST00000456467 |
| 7.33e-60 | FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_7487f95bebf004314f7491e4e7567fad | p1@ENST00000456467 |
| 9.27e-59 | FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_5b6e1fcbf326ed22204afda7d2cb3d12 | p3@LOC100504989, p3@Timeless |
| 9.27e-59 | FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_5b6e1fcbf326ed22204afda7d2cb3d12 | p3@LOC100504989, p3@Timeless |
| 9.27e-59 | FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_5b6e1fcbf326ed22204afda7d2cb3d12 | p@chr7:64675015..64675028, + |
| 9.27e-59 | FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_5b6e1fcbf326ed22204afda7d2cb3d12 | p@chr7:64675015..64675028, + |
| 1.08e-58 | FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_979bff8c42323e8a3a93154f612638d5 | p6@Pax6 |
| 1.08e-58 | FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_979bff8c42323e8a3a93154f612638d5 | p@chr6:97891135..97891147, + |
| 1.08e-58 | FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_979bff8c42323e8a3a93154f612638d5 | p@chr6:97891135..97891147, + |
| 1.08e-58 | FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_979bff8c42323e8a3a93154f612638d5 | p6@Pax6 |
| 1.26e-58 | FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_ef4b2cda3bea49aa2a5f543128ce6dd8 | p1@4933429O19Rik |
| 1.26e-58 | FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_ef4b2cda3bea49aa2a5f543128ce6dd8 | p1@4933429O19Rik |
| 3.92e-58 | FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_f2a553deb516cb1d920036e9c5cc218c | p1@ENST00000448923 |
| 3.92e-58 | FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_f2a553deb516cb1d920036e9c5cc218c | p1@ENST00000448923 |
| 5.97e-58 | FFCP PHASE2:Hg19::chr2:45169172..45169177,+#_e71959c7dcdabc412f23078e80805186 | p11@SIX3 |
| 5.97e-58 | FFCP PHASE1:Hg19::chr2:45169172..45169177,+#_e71959c7dcdabc412f23078e80805186 | p11@SIX3 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112698505..112698537,-#_57338d7655c57a304efa288c52c6529b | p@chr5:112698505..112698537, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr10:93761330..93761358,-#_57338d7655c57a304efa288c52c6529b | p1@Gm4792 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112686483..112686494,+#_57338d7655c57a304efa288c52c6529b | p@chr5:112686483..112686494, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr14:35413322..35413333,-#_57338d7655c57a304efa288c52c6529b | p1@Opn4 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr10:127668480..127668491,+#_57338d7655c57a304efa288c52c6529b | p@chr10:127668480..127668491, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr1:65147201..65147212,-#_57338d7655c57a304efa288c52c6529b | p@chr1:65147201..65147212, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr14:52730585..52730607,+#_57338d7655c57a304efa288c52c6529b | p1@Rpgrip1 |
| 7.26e-58 | FFCP PHASE1:Mm9::chr1:65147224..65147236,-#_57338d7655c57a304efa288c52c6529b | p@chr1:65147224..65147236, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr16:56204438..56204451,+#_57338d7655c57a304efa288c52c6529b | p1@Impg2 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr3:34488839..34488876,+#_57338d7655c57a304efa288c52c6529b | p1@ENSMUST00000173365 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr16:56204438..56204451,+#_57338d7655c57a304efa288c52c6529b | p1@Impg2 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr6:3944001..3944016,+#_57338d7655c57a304efa288c52c6529b | p1@Gngt1 |
| 7.26e-58 | FFCP PHASE1:Mm9::chr3:34488839..34488876,+#_57338d7655c57a304efa288c52c6529b | p1@ENSMUST00000173365 |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:113507470..113507483,-#_57338d7655c57a304efa288c52c6529b | p@chr5:113507470..113507483, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:113507470..113507483,-#_57338d7655c57a304efa288c52c6529b | p@chr5:113507470..113507483, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr17:31817947..31817965,+#_57338d7655c57a304efa288c52c6529b | p@chr17:31817947..31817965, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112686483..112686494,+#_57338d7655c57a304efa288c52c6529b | p@chr5:112686483..112686494, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112696408..112696421,-#_57338d7655c57a304efa288c52c6529b | p@chr5:112696408..112696421, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:113506006..113506025,-#_57338d7655c57a304efa288c52c6529b | p@chr5:113506006..113506025, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112675556..112675574,-#_57338d7655c57a304efa288c52c6529b | p@chr5:112675556..112675574, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr1:65149656..65149674,-#_57338d7655c57a304efa288c52c6529b | p2@Cryga |
| 7.26e-58 | FFCP PHASE2:Mm9::chr9:107964319..107964338,-#_57338d7655c57a304efa288c52c6529b | p11@Rnf123 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr2:93906955..93906973,-#_57338d7655c57a304efa288c52c6529b | p2@Hsd17b12 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112690963..112690994,+#_57338d7655c57a304efa288c52c6529b | p@chr5:112690963..112690994, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:113504891..113504916,-#_57338d7655c57a304efa288c52c6529b | p@chr5:113504891..113504916, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr1:38092602..38092616,+#_57338d7655c57a304efa288c52c6529b | p@chr1:38092602..38092616, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr1:38092538..38092550,+#_57338d7655c57a304efa288c52c6529b | p@chr1:38092538..38092550, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:113506190..113506202,-#_57338d7655c57a304efa288c52c6529b | p@chr5:113506190..113506202, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr11:95705150..95705170,+#_57338d7655c57a304efa288c52c6529b | p3@Gngt2 |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112675556..112675574,-#_57338d7655c57a304efa288c52c6529b | p@chr5:112675556..112675574, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr11:95705150..95705170,+#_57338d7655c57a304efa288c52c6529b | p3@Gngt2 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr14:49501519..49501530,-#_57338d7655c57a304efa288c52c6529b | p@chr14:49501519..49501530, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr1:65147224..65147236,-#_57338d7655c57a304efa288c52c6529b | p@chr1:65147224..65147236, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr7:29477874..29477889,+#_57338d7655c57a304efa288c52c6529b | p6@Fbxo27 |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112691047..112691066,+#_57338d7655c57a304efa288c52c6529b | p@chr5:112691047..112691066, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112692580..112692595,+#_57338d7655c57a304efa288c52c6529b | p@chr5:112692580..112692595, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:113506190..113506202,-#_57338d7655c57a304efa288c52c6529b | p@chr5:113506190..113506202, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr1:65146997..65147021,-#_57338d7655c57a304efa288c52c6529b | p@chr1:65146997..65147021, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112690729..112690741,+#_57338d7655c57a304efa288c52c6529b | p@chr5:112690729..112690741, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr7:29477874..29477889,+#_57338d7655c57a304efa288c52c6529b | p6@Fbxo27 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr8:77582172..77582183,+#_57338d7655c57a304efa288c52c6529b | p@chr8:77582172..77582183, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr14:52730585..52730607,+#_57338d7655c57a304efa288c52c6529b | p1@Rpgrip1 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112681470..112681483,-#_57338d7655c57a304efa288c52c6529b | p@chr5:112681470..112681483, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr17:31817947..31817965,+#_57338d7655c57a304efa288c52c6529b | p@chr17:31817947..31817965, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr10:127668686..127668697,+#_57338d7655c57a304efa288c52c6529b | p4@LOC100504989, p4@Timeless |
| 7.26e-58 | FFCP PHASE2:Mm9::chr17:31818629..31818644,+#_57338d7655c57a304efa288c52c6529b | p@chr17:31818629..31818644, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr3:129525405..129525428,-#_57338d7655c57a304efa288c52c6529b | p1@Rrh |
| 7.26e-58 | FFCP PHASE2:Mm9::chr15:36655026..36655032,+#_57338d7655c57a304efa288c52c6529b | p@chr15:36655026..36655032, + |
