UBERON:0004637
From FANTOM5_SSTAR
Name: | otic capsule | ||
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Definition: | "The capsule surrounding the inner ear mechanism; in elasmobranchs, it remains cartilaginous in the adult; in the embryos of higher vertebrates, it is cartilaginous at first but later becomes bony (at approximately 23 weeks in humans)[Biology-Online]. Bilaterally paired cartilage encasing the semicircular canals of the inner ear[ZFA]." http://www.biology-online.org/dictionary/Otic_capsule, ZFA:0001500 | ||
Xrefs: |
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Synonyms: |
"auditory capsule" RELATED [VHOG:0000854] "otic capsule" EXACT [ZFA:0001500] "periotic" RELATED [] "periotic capsule" RELATED [VHOG:0000854] | ||
Comments: | Taxon notes: developmental relationships need to be checked |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000020(sense organ),UBERON:0004120(mesoderm-derived structure),UBERON:0004121(ectoderm-derived structure),UBERON:0004765(skeletal element),UBERON:0010314(structure with developmental contribution from neural crest) |
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develops_from: | UBERON:0010351(otic capsule cartilage condensation) |
part_of: | UBERON:0001694(petrous part of temporal bone),UBERON:0001703(neurocranium),UBERON:0001846(internal ear) |
Children
part of: | UBERON:0010113 (future membranous labyrinth) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004637 (otic capsule), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_ef0848008da7a18a37873e78b0320066 | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_ef0848008da7a18a37873e78b0320066 | p@chr4:130461150..130461185, + |
1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_ef0848008da7a18a37873e78b0320066 | p@chr18:38104702..38104718, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_ef0848008da7a18a37873e78b0320066 | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:16651649..16651655, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_ef0848008da7a18a37873e78b0320066 | p@chr15:97806034..97806061, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_ef0848008da7a18a37873e78b0320066 | p5@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_ef0848008da7a18a37873e78b0320066 | p@chr19:10536767..10536777, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_ef0848008da7a18a37873e78b0320066 | p6@Jag1 |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:93235253..93235264, + |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_ef0848008da7a18a37873e78b0320066 | p6@Fam70b |
1.87e-86 | FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_ef0848008da7a18a37873e78b0320066 | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_ef0848008da7a18a37873e78b0320066 | p@chr9:50968647..50968668, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_ef0848008da7a18a37873e78b0320066 | p@chr3:100724698..100724706, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_ef0848008da7a18a37873e78b0320066 | p@chr12:109905399..109905416, + |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_ef0848008da7a18a37873e78b0320066 | p@chr8:13414266..13414279, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_ef0848008da7a18a37873e78b0320066 | p@chr9:66860888..66860899, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:182528371..182528385, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_ef0848008da7a18a37873e78b0320066 | p@chr9:42206784..42206793, - |
1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_ef0848008da7a18a37873e78b0320066 | p@chr18:42158627..42158630, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_ef0848008da7a18a37873e78b0320066 | +, p@chr4:101908153..101908163 |
1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_ef0848008da7a18a37873e78b0320066 | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_ef0848008da7a18a37873e78b0320066 | p2@Plscr5 |
1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_ef0848008da7a18a37873e78b0320066 | p1@Tmprss7 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_ef0848008da7a18a37873e78b0320066 | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_ef0848008da7a18a37873e78b0320066 | p@chr19:55256373..55256384, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_ef0848008da7a18a37873e78b0320066 | p10@Sec11a |
1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_ef0848008da7a18a37873e78b0320066 | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_ef0848008da7a18a37873e78b0320066 | p2@Fscn2 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:78523144..78523177, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_ef0848008da7a18a37873e78b0320066 | p@chr13:37195838..37195870, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_ef0848008da7a18a37873e78b0320066 | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_ef0848008da7a18a37873e78b0320066 | p@chr14:31283085..31283097, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_ef0848008da7a18a37873e78b0320066 | p2@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_ef0848008da7a18a37873e78b0320066 | p@chr6:86745686..86745727, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_ef0848008da7a18a37873e78b0320066 | p7@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_ef0848008da7a18a37873e78b0320066 | p@chr14:102297728..102297742, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_ef0848008da7a18a37873e78b0320066 | p11@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_ef0848008da7a18a37873e78b0320066 | -, p@chr11:8405038..8405048 |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_ef0848008da7a18a37873e78b0320066 | p1@Kncn |
1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_ef0848008da7a18a37873e78b0320066 | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_ef0848008da7a18a37873e78b0320066 | p@chr3:100724698..100724706, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_ef0848008da7a18a37873e78b0320066 | p@chr4:133802857..133802884, + |
1.87e-86 | FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_ef0848008da7a18a37873e78b0320066 | p5@BC030867 |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_ef0848008da7a18a37873e78b0320066 | p9@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_ef0848008da7a18a37873e78b0320066 | p@chr13:78257518..78257522, + |
1.87e-86 | FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_ef0848008da7a18a37873e78b0320066 | p@chr7:133957514..133957529, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_ef0848008da7a18a37873e78b0320066 | p11@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_ef0848008da7a18a37873e78b0320066 | +, p@chr18:81314626..81314636 |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_ef0848008da7a18a37873e78b0320066 | p@chr8:13414266..13414279, + |
1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_ef0848008da7a18a37873e78b0320066 | p@chr16:93971325..93971337, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_ef0848008da7a18a37873e78b0320066 | p2@Otol1 |
1.87e-86 | FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_ef0848008da7a18a37873e78b0320066 | p5@Fer1l6 |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_ef0848008da7a18a37873e78b0320066 | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_ef0848008da7a18a37873e78b0320066 | p@chrX:154140800..154140810, + |
1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_ef0848008da7a18a37873e78b0320066 | p@chr14:47293487..47293493, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_ef0848008da7a18a37873e78b0320066 | p1@Otol1 |
1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_ef0848008da7a18a37873e78b0320066 | p@chr18:66033526..66033539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_ef0848008da7a18a37873e78b0320066 | p@chr17:27252925..27252939, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_ef0848008da7a18a37873e78b0320066 | p@chr6:113251606..113251613, + |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_ef0848008da7a18a37873e78b0320066 | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_ef0848008da7a18a37873e78b0320066 | p@chr5:150945209..150945220, + |
1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_ef0848008da7a18a37873e78b0320066 | p@chr11:4689776..4689785, - |
1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_ef0848008da7a18a37873e78b0320066 | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_ef0848008da7a18a37873e78b0320066 | p@chr10:108316802..108316807, - |
1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_ef0848008da7a18a37873e78b0320066 | p@chr15:103146966..103146971, - |
1.87e-86 | FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_ef0848008da7a18a37873e78b0320066 | p5@BC030867 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_ef0848008da7a18a37873e78b0320066 | p1@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_ef0848008da7a18a37873e78b0320066 | p2@9230102O04Rik |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_ef0848008da7a18a37873e78b0320066 | p@chr13:78257491..78257498, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_ef0848008da7a18a37873e78b0320066 | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_ef0848008da7a18a37873e78b0320066 | p@chr7:29733825..29733837, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:182528371..182528385, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_ef0848008da7a18a37873e78b0320066 | p3@Gipc3 |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_ef0848008da7a18a37873e78b0320066 | p@chr16:93971325..93971337, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_ef0848008da7a18a37873e78b0320066 | p6@Jag1 |
1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_ef0848008da7a18a37873e78b0320066 | p1@Tmprss3 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_ef0848008da7a18a37873e78b0320066 | p@chr3:154693281..154693317, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_ef0848008da7a18a37873e78b0320066 | p3@Epyc |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_ef0848008da7a18a37873e78b0320066 | p@chr9:42207375..42207384, - |
1.87e-86 | FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_ef0848008da7a18a37873e78b0320066 | p2@Gpr152 |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_ef0848008da7a18a37873e78b0320066 | p1@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_ef0848008da7a18a37873e78b0320066 | p@chr12:13572961..13572974, + |
1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_ef0848008da7a18a37873e78b0320066 | p1@Tomt |
1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_ef0848008da7a18a37873e78b0320066 | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_ef0848008da7a18a37873e78b0320066 | p@chr17:13983160..13983167, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_ef0848008da7a18a37873e78b0320066 | p@chr3:81012915..81012923, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_ef0848008da7a18a37873e78b0320066 | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_ef0848008da7a18a37873e78b0320066 | p@chr2:53464168..53464175, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_ef0848008da7a18a37873e78b0320066 | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_ef0848008da7a18a37873e78b0320066 | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_ef0848008da7a18a37873e78b0320066 | p@chr19:10536797..10536802, - |
1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_ef0848008da7a18a37873e78b0320066 | p@chr13:48087761..48087775, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_ef0848008da7a18a37873e78b0320066 | p21@Espn |
1.87e-86 | FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_ef0848008da7a18a37873e78b0320066 | p@chr13:43699188..43699216, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_ef0848008da7a18a37873e78b0320066 | p@chr6:29428397..29428407, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_ef0848008da7a18a37873e78b0320066 | p1@Tmprss3 |
1.87e-86 | FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_ef0848008da7a18a37873e78b0320066 | p10@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_ef0848008da7a18a37873e78b0320066 | p@chr11:4689837..4689845, - |
1.87e-86 | FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_ef0848008da7a18a37873e78b0320066 | p15@Mctp1 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Skeletal elements surrounding the membranous labyrinth of the inner ear. Sensory capsules anterolateral to and confluent with occipital arch.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: part_of occipito-petrosal (AAO:0010831)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: part_of otic and occipital (AAO:0000993)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.