UBERON:0001949: Difference between revisions
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|located_in= | |located_in= | ||
|name=gingival epithelium | |name=gingival epithelium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001828 | |part_of=UBERON:0001828 | ||
Latest revision as of 17:23, 12 September 2014
| Name: | gingival epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A stratified squamous epithelium consisting of a basal layer; it is keratinized or parakeratinized[BTO]." [BTO:0004998] | ||
| Xrefs: |
| ||
| Synonyms: |
"epithelial tissue of gingiva" EXACT [OBOL:automatic] "epithelium of gingiva" EXACT [] "gingiva epithelial tissue" EXACT [OBOL:automatic] "gingiva epithelium" EXACT [OBOL:automatic] | ||
| Alt_id: | UBERON:FMA_62423-MA_0001576 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002424(oral epithelium),UBERON:0006915(stratified squamous epithelium) |
|---|---|
| part_of: | UBERON:0001828(gingiva) |
Children
| part of: | CL:0002621 (gingival epithelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
- 11302-117B6 (Gingival epithelial cells, donor2 (GEA14))
- 11379-118B2 (Gingival epithelial cells, donor3 (GEA15))
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001949 (gingival epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.06e-99 | FFCP PHASE2:Hg19::chr4:143470541..143470551,+#_1f7f72d444e25a6c09fcb6c286ac452d | p@chr4:143470541..143470551, + |
| 4.06e-99 | FFCP PHASE1:Hg19::chr4:143470541..143470551,+#_1f7f72d444e25a6c09fcb6c286ac452d | p@chr4:143470541..143470551, + |
| 1.52e-87 | FFCP PHASE1:Hg19::chr17:73753856..73753871,+#_dd14ca5959de4fbd059438420b177d70 | p1@CU674593 |
| 1.52e-87 | FFCP PHASE2:Hg19::chr1:14465017..14465026,+#_dd14ca5959de4fbd059438420b177d70 | p@chr1:14465017..14465026, + |
| 1.52e-87 | FFCP PHASE1:Hg19::chr1:14465017..14465026,+#_dd14ca5959de4fbd059438420b177d70 | p@chr1:14465017..14465026, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr17:73753856..73753871,+#_dd14ca5959de4fbd059438420b177d70 | p1@CU674593 |
| 2.28e-85 | FFCP PHASE1:Hg19::chr8:130798890..130798901,-#_510f319bae66e927778859504192ba4a | p3@GSDMC |
| 2.28e-85 | FFCP PHASE2:Hg19::chr8:130798890..130798901,-#_510f319bae66e927778859504192ba4a | p3@GSDMC |
| 5.41e-85 | FFCP PHASE2:Hg19::chr11:93754560..93754567,+#_dbb58d4af95d53f8ccf1f6f7f674e403 | p@chr11:93754560..93754567, + |
| 5.41e-85 | FFCP PHASE1:Hg19::chr11:93754560..93754567,+#_dbb58d4af95d53f8ccf1f6f7f674e403 | p@chr11:93754560..93754567, + |
| 2.27e-84 | FFCP PHASE2:Hg19::chr10:105791095..105791110,-#_17d40413fbf7bf733ec29fa4df662ed1 | p@chr10:105791095..105791110, - |
| 2.27e-84 | FFCP PHASE1:Hg19::chr10:105791095..105791110,-#_17d40413fbf7bf733ec29fa4df662ed1 | p@chr10:105791095..105791110, - |
| 1.01e-74 | FFCP PHASE1:Hg19::chr7:40883542..40883550,+#_c5e0da855590070edb76f2e0780d3f3c | p@chr7:40883542..40883550, + |
| 1.01e-74 | FFCP PHASE2:Hg19::chr1:153533849..153533860,-#_c5e0da855590070edb76f2e0780d3f3c | p@chr1:153533849..153533860, - |
| 1.01e-74 | FFCP PHASE1:Hg19::chr1:153533849..153533860,-#_c5e0da855590070edb76f2e0780d3f3c | p@chr1:153533849..153533860, - |
| 1.01e-74 | FFCP PHASE2:Hg19::chr7:40883542..40883550,+#_c5e0da855590070edb76f2e0780d3f3c | p@chr7:40883542..40883550, + |
| 2.14e-74 | FFCP PHASE2:Hg19::chr3:190252374..190252383,-#_cc2da72e90e2eb276f628a138e150637 | p@chr3:190252374..190252383, - |
| 2.14e-74 | FFCP PHASE1:Hg19::chr3:190252374..190252383,-#_cc2da72e90e2eb276f628a138e150637 | p@chr3:190252374..190252383, - |
| 4.55e-74 | FFCP PHASE2:Hg19::chr21:44957893..44957903,-#_1526422914d2e17b9a55c1c96695112e | p@chr21:44957893..44957903, - |
| 4.55e-74 | FFCP PHASE1:Hg19::chr21:44957893..44957903,-#_1526422914d2e17b9a55c1c96695112e | p@chr21:44957893..44957903, - |
| 9.64e-74 | FFCP PHASE2:Hg19::chr10:106205489..106205498,+#_fbb30c1454dfa876cb3d5fe89f98bf56 | p@chr10:106205489..106205498, + |
| 9.64e-74 | FFCP PHASE1:Hg19::chr10:106205489..106205498,+#_fbb30c1454dfa876cb3d5fe89f98bf56 | p@chr10:106205489..106205498, + |
| 3.35e-66 | FFCP PHASE1:Hg19::chr15:40531729..40531738,+#_a490473bb7fc3f6f0bd768e052facac5 | p15@PAK6 |
| 3.35e-66 | FFCP PHASE2:Hg19::chr15:40531729..40531738,+#_a490473bb7fc3f6f0bd768e052facac5 | p15@PAK6 |
| 4.71e-66 | FFCP PHASE2:Hg19::chr16:82671490..82671521,+#_1338156f928ec3b93db5987c67395d36 | p@chr16:82671490..82671521, + |
| 4.71e-66 | FFCP PHASE1:Hg19::chr16:82671490..82671521,+#_1338156f928ec3b93db5987c67395d36 | p@chr16:82671490..82671521, + |
| 6.53e-66 | FFCP PHASE2:Hg19::chr9:108870138..108870152,+#_88253062b9407ee9b760d0c07788d9f8 | p1@uc004bcw.2 |
| 6.53e-66 | FFCP PHASE1:Hg19::chr9:108870138..108870152,+#_88253062b9407ee9b760d0c07788d9f8 | p1@uc004bcw.2 |
| 1.22e-59 | FFCP PHASE2:Hg19::chr11:13030878..13030889,+#_b6516beccc6bff060f5f8c40f0d9e788 | p2@RASSF10 |
| 1.22e-59 | FFCP PHASE1:Hg19::chr11:13030878..13030889,+#_b6516beccc6bff060f5f8c40f0d9e788 | p2@RASSF10 |
| 1.83e-59 | FFCP PHASE1:Hg19::chr18:20493879..20493891,+#_371d58ec95c3aea84037b19bb5fd44f5 | p@chr18:20493879..20493891, + |
| 1.83e-59 | FFCP PHASE2:Hg19::chr18:20493879..20493891,+#_371d58ec95c3aea84037b19bb5fd44f5 | p@chr18:20493879..20493891, + |
| 2.73e-59 | FFCP PHASE2:Hg19::chr8:124850358..124850380,+#_c3ab95f7db7d3d3c87081166fd8a5424 | p@chr8:124850358..124850380, + |
| 2.73e-59 | FFCP PHASE1:Hg19::chr8:124850358..124850380,+#_c3ab95f7db7d3d3c87081166fd8a5424 | p@chr8:124850358..124850380, + |
| 8.69e-55 | FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_6831e7347ea1ca2e5c4102cf2e910563 | p@chr13:30259768..30259777, + |
| 8.69e-55 | FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_6831e7347ea1ca2e5c4102cf2e910563 | p@chr13:30259768..30259777, + |
| 1.81e-54 | FFCP PHASE1:Hg19::chr5:167247119..167247129,+#_ca62414e80ff180e58648eff530f9cf4 | p@chr5:167247119..167247129, + |
| 1.81e-54 | FFCP PHASE2:Hg19::chr5:167247119..167247129,+#_ca62414e80ff180e58648eff530f9cf4 | p@chr5:167247119..167247129, + |
| 2.17e-54 | FFCP PHASE1:Hg19::chr5:52619638..52619641,+#_3c3008ff61cd34d166c7a8c088f3e4af | p@chr5:52619638..52619641, + |
| 2.17e-54 | FFCP PHASE1:Hg19::chr13:75017232..75017235,+#_3c3008ff61cd34d166c7a8c088f3e4af | p@chr13:75017232..75017235, + |
| 2.17e-54 | FFCP PHASE2:Hg19::chr13:75017232..75017235,+#_3c3008ff61cd34d166c7a8c088f3e4af | p@chr13:75017232..75017235, + |
| 2.17e-54 | FFCP PHASE2:Hg19::chr5:52619638..52619641,+#_3c3008ff61cd34d166c7a8c088f3e4af | p@chr5:52619638..52619641, + |
| 5.41e-54 | FFCP PHASE1:Hg19::chr11:129511955..129511961,-#_63ef71d91a3ed39634f12ac3effadb1b | p@chr11:129511955..129511961, - |
| 5.41e-54 | FFCP PHASE2:Hg19::chr11:129511955..129511961,-#_63ef71d91a3ed39634f12ac3effadb1b | p@chr11:129511955..129511961, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr3:52440350..52440361,-#_ca1111d0240acce4cc25c920ee8a4a77 | p@chr3:52440350..52440361, - |
| 2.87e-53 | FFCP PHASE1:Hg19::chr3:52440350..52440361,-#_ca1111d0240acce4cc25c920ee8a4a77 | p@chr3:52440350..52440361, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr1:183213228..183213235,+#_ca1111d0240acce4cc25c920ee8a4a77 | p@chr1:183213228..183213235, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr1:183213228..183213235,+#_ca1111d0240acce4cc25c920ee8a4a77 | p@chr1:183213228..183213235, + |
| 4.89e-53 | FFCP PHASE2:Hg19::chr8:130798565..130798567,-#_89181cade1d1bbabd928e84e18818e53 | p4@GSDMC |
| 4.89e-53 | FFCP PHASE1:Hg19::chr8:130798565..130798567,-#_89181cade1d1bbabd928e84e18818e53 | p4@GSDMC |
| 4.89e-53 | FFCP PHASE2:Hg19::chr10:5567644..5567657,+#_89181cade1d1bbabd928e84e18818e53 | p@chr10:5567644..5567657, + |
| 4.89e-53 | FFCP PHASE1:Hg19::chr10:5567644..5567657,+#_89181cade1d1bbabd928e84e18818e53 | p@chr10:5567644..5567657, + |
| 6.39e-53 | FFCP PHASE2:Hg19::chr17:73720330..73720338,+#_76533859e6563f49f34792c37a92378d | p22@ITGB4 |
| 6.39e-53 | FFCP PHASE2:Hg19::chr10:106205503..106205518,+#_76533859e6563f49f34792c37a92378d | p@chr10:106205503..106205518, + |
| 6.39e-53 | FFCP PHASE1:Hg19::chr10:106205503..106205518,+#_76533859e6563f49f34792c37a92378d | p@chr10:106205503..106205518, + |
| 6.39e-53 | FFCP PHASE1:Hg19::chr17:73720330..73720338,+#_76533859e6563f49f34792c37a92378d | p22@ITGB4 |
| 6.12e-50 | FFCP PHASE1:Hg19::chr19:10665857..10665900,-#_20984681ad033073002f4adfa043b672 | p@chr19:10665857..10665900, - |
| 6.12e-50 | FFCP PHASE2:Hg19::chr19:10665857..10665900,-#_20984681ad033073002f4adfa043b672 | p@chr19:10665857..10665900, - |
| 7.24e-50 | FFCP PHASE1:Hg19::chr11:392625..392628,+#_ca78ba20ef811991f3f7c2c4790891f8 | p13@PKP3 |
| 7.24e-50 | FFCP PHASE2:Hg19::chr11:392625..392628,+#_ca78ba20ef811991f3f7c2c4790891f8 | p13@PKP3 |
| 5.68e-46 | FFCP PHASE2:Hg19::chr2:231649545..231649550,-#_bebf315cee89f9b2ba7897a826c82ffe | p@chr2:231649545..231649550, - |
| 5.68e-46 | FFCP PHASE1:Hg19::chr2:231649545..231649550,-#_bebf315cee89f9b2ba7897a826c82ffe | p@chr2:231649545..231649550, - |
| 5.68e-46 | FFCP PHASE2:Hg19::chr12:116955659..116955671,+#_bebf315cee89f9b2ba7897a826c82ffe | p1@ENST00000552992 |
| 5.68e-46 | FFCP PHASE1:Hg19::chr12:116955659..116955671,+#_bebf315cee89f9b2ba7897a826c82ffe | p1@ENST00000552992 |
| 6.94e-44 | FFCP PHASE2:Hg19::chr11:13073062..13073067,+#_2ce8b05797594657b05abe8c85d62355 | p@chr11:13073062..13073067, + |
| 6.94e-44 | FFCP PHASE1:Hg19::chr11:13073062..13073067,+#_2ce8b05797594657b05abe8c85d62355 | p@chr11:13073062..13073067, + |
| 9.28e-44 | FFCP PHASE2:Hg19::chr6:29643393..29643442,-#_0bbc1dfd3b2e3e0ee719b498a812ec0f | p@chr6:29643393..29643442, - |
| 9.28e-44 | FFCP PHASE1:Hg19::chr6:29643393..29643442,-#_0bbc1dfd3b2e3e0ee719b498a812ec0f | p@chr6:29643393..29643442, - |
| 1.43e-43 | FFCP PHASE2:Hg19::chr8:105212349..105212367,+#_41a08f489ec67e4bdc51bf15dadfadaf | p@chr8:105212349..105212367, + |
| 1.43e-43 | FFCP PHASE1:Hg19::chr8:105212349..105212367,+#_41a08f489ec67e4bdc51bf15dadfadaf | p@chr8:105212349..105212367, + |
| 1.92e-43 | FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_0147ab6a993a2ff5043cbbc9c74e9a7e | p2@HEPHL1 |
| 1.92e-43 | FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_0147ab6a993a2ff5043cbbc9c74e9a7e | p2@HEPHL1 |
| 2.21e-43 | FFCP PHASE2:Hg19::chr21:44957855..44957891,-#_17693727e7f45d89034068379d4db3ef | p@chr21:44957855..44957891, - |
| 2.21e-43 | FFCP PHASE1:Hg19::chr21:44957855..44957891,-#_17693727e7f45d89034068379d4db3ef | p@chr21:44957855..44957891, - |
| 4.55e-43 | FFCP PHASE2:Hg19::chr2:43768420..43768427,-#_e1c8ee70731e8a0b757bf76264ccbeec | p5@THADA |
| 4.55e-43 | FFCP PHASE1:Hg19::chr2:43768420..43768427,-#_e1c8ee70731e8a0b757bf76264ccbeec | p5@THADA |
| 4.55e-43 | FFCP PHASE2:Hg19::chr9:34662651..34662656,-#_e1c8ee70731e8a0b757bf76264ccbeec | p1@CCL27 |
| 4.55e-43 | FFCP PHASE1:Hg19::chr9:34662651..34662656,-#_e1c8ee70731e8a0b757bf76264ccbeec | p1@CCL27 |
| 6.07e-43 | FFCP PHASE2:Hg19::chr18:9617195..9617198,-#_6e7ca856bd8b6a150bdf68aa06726edd | p@chr18:9617195..9617198, - |
| 6.07e-43 | FFCP PHASE1:Hg19::chr18:9617195..9617198,-#_6e7ca856bd8b6a150bdf68aa06726edd | p@chr18:9617195..9617198, - |
| 1.91e-42 | FFCP PHASE2:Hg19::chr1:153534027..153534037,+#_f5157360f1fa5d1474b9c8d1008d7edf | p@chr1:153534027..153534037, + |
| 1.91e-42 | FFCP PHASE1:Hg19::chr1:153534027..153534037,+#_f5157360f1fa5d1474b9c8d1008d7edf | p@chr1:153534027..153534037, + |
| 5.06e-41 | FFCP PHASE2:Hg19::chr7:40883521..40883532,+#_9fc2b20fa19b9f271d0ec458032c6bb8 | p@chr7:40883521..40883532, + |
| 5.06e-41 | FFCP PHASE1:Hg19::chr7:40883521..40883532,+#_9fc2b20fa19b9f271d0ec458032c6bb8 | p@chr7:40883521..40883532, + |
| 6.64e-41 | FFCP PHASE1:Hg19::chr3:149510368..149510386,-#_a67e2b70d6bdf7c078ad48b480fb2b71 | p5@ANKUB1 |
| 6.64e-41 | FFCP PHASE2:Hg19::chr3:149510368..149510386,-#_a67e2b70d6bdf7c078ad48b480fb2b71 | p5@ANKUB1 |
| 1.96e-40 | FFCP PHASE2:Hg19::chr1:183213300..183213316,+#_dd52b770ea5a1084a578284d179897ca | p@chr1:183213300..183213316, + |
| 1.96e-40 | FFCP PHASE1:Hg19::chr1:183213300..183213316,+#_dd52b770ea5a1084a578284d179897ca | p@chr1:183213300..183213316, + |
| 2.93e-40 | FFCP PHASE2:Hg19::chr5:52552639..52552656,-#_8e4bb96518fe82bed7c977286effc43d | p@chr5:52552639..52552656, - |
| 2.93e-40 | FFCP PHASE1:Hg19::chr5:52552639..52552656,-#_8e4bb96518fe82bed7c977286effc43d | p@chr5:52552639..52552656, - |
| 4.38e-40 | FFCP PHASE1:Hg19::chrX:19692351..19692356,-#_1566738bdfd79aae00f22b889bffe0c4 | p@chrX:19692351..19692356, - |
| 4.38e-40 | FFCP PHASE2:Hg19::chr4:15920326..15920338,+#_1566738bdfd79aae00f22b889bffe0c4 | p@chr4:15920326..15920338, + |
| 4.38e-40 | FFCP PHASE2:Hg19::chrX:19692351..19692356,-#_1566738bdfd79aae00f22b889bffe0c4 | p@chrX:19692351..19692356, - |
| 4.38e-40 | FFCP PHASE1:Hg19::chr4:15920326..15920338,+#_1566738bdfd79aae00f22b889bffe0c4 | p@chr4:15920326..15920338, + |
| 1.23e-38 | FFCP PHASE2:Hg19::chr2:69026957..69026966,+#_d2253dbfb08f8dd00f23e333a030b6dd | p@chr2:69026957..69026966, + |
| 1.23e-38 | FFCP PHASE1:Hg19::chr2:69026957..69026966,+#_d2253dbfb08f8dd00f23e333a030b6dd | p@chr2:69026957..69026966, + |
| 2.18e-38 | FFCP PHASE1:Hg19::chr7:56051493..56051514,+#_e878c269f24a5e2b2595d2963f4ea02d | p@chr7:56051493..56051514, + |
| 2.18e-38 | FFCP PHASE2:Hg19::chr7:56051493..56051514,+#_e878c269f24a5e2b2595d2963f4ea02d | p@chr7:56051493..56051514, + |
| 2.64e-38 | FFCP PHASE2:Hg19::chr7:41277861..41277905,+#_c983842231030f3e42634e70ae2a72f1 | p@chr7:41277861..41277905, + |
| 2.64e-38 | FFCP PHASE1:Hg19::chr7:41277861..41277905,+#_c983842231030f3e42634e70ae2a72f1 | p@chr7:41277861..41277905, + |
