FFCP PHASE2:Hg19::chr17:34087880..34087887,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:146853 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:29581 |TSScl...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=146853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=29581 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8WW18 | ||
|association_with_transcript=-28bp_to_ENST00000285023,NM_145272,uc002hjx.2_5end | |association_with_transcript=-28bp_to_ENST00000285023,NM_145272,uc002hjx.2_5end | ||
|cluster_id=chr17:34087880..34087887,+ | |cluster_id=chr17:34087880..34087887,+ | ||
Latest revision as of 15:32, 19 September 2015
| Short description: | p2@C17orf50 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_C17orf50_5end |
| Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
| Association with transcript: | -28bp_to_ENST00000285023, NM_145272, uc002hjx.2_5end |
| EntrezGene: | C17orf50 |
| HGNC: | 29581 |
| UniProt: | Q8WW18 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@C17orf50 |
|---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| testis | 6.50e-34 | 8 |
| male reproductive organ | 4.86e-25 | 11 |
| gonad | 1.02e-13 | 21 |
| indifferent external genitalia | 1.02e-13 | 21 |
| indifferent gonad | 1.02e-13 | 21 |
| gonad primordium | 1.02e-13 | 21 |
| external genitalia | 3.77e-13 | 22 |
| male organism | 3.77e-13 | 22 |
| male reproductive system | 3.77e-13 | 22 |
| body cavity | 7.30e-07 | 46 |
Showing 1 to 10 of 10 entries
