FFCP PHASE2:Hg19::chr2:21266816..21266849,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:338 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:603 |TSSclassif...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=603 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8MUN2,F5H109 | ||
|association_with_transcript=0bp_to_ENST00000399256,ENST00000535079_5end | |association_with_transcript=0bp_to_ENST00000399256,ENST00000535079_5end | ||
|cluster_id=chr2:21266816..21266849,- | |cluster_id=chr2:21266816..21266849,- | ||
Latest revision as of 00:26, 20 September 2015
| Short description: | p2@APOB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_APOB_5end |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | 0bp_to_ENST00000399256, ENST00000535079_5end |
| EntrezGene: | APOB |
| HGNC: | 603 |
| UniProt: | A8MUN2F5H109 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@APOB |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 1.82e-32 | 12 |
| endodermal cell | 6.96e-08 | 58 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| liver | 1.50e-33 | 19 |
| digestive gland | 1.50e-33 | 19 |
| liver bud | 1.50e-33 | 19 |
| hepatic diverticulum | 8.39e-29 | 22 |
| liver primordium | 8.39e-29 | 22 |
| digestive tract diverticulum | 1.71e-27 | 23 |
| epithelial sac | 3.42e-25 | 25 |
| epithelium of foregut-midgut junction | 3.42e-25 | 25 |
| anatomical boundary | 3.42e-25 | 25 |
| hepatobiliary system | 3.42e-25 | 25 |
Showing 1 to 10 of 37 entries
