FFCP PHASE1:Hg19::chr3:159570936..159570956,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=15678 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 09:47, 16 September 2015
Short description: | p16@SCHIP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SCHIP1_5end |
Coexpression cluster: | C4298_heart_left_Endothelial_acute_Renal_skeletal_tongue |
Association with transcript: | 155bp_to_ENST00000482885_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p16@SCHIP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.14e-60 | 24 |
endothelial cell | 2.19e-55 | 36 |
meso-epithelial cell | 5.59e-43 | 45 |
blood vessel endothelial cell | 8.08e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.08e-41 | 18 |
lining cell | 7.22e-32 | 58 |
barrier cell | 7.22e-32 | 58 |
vein endothelial cell | 2.04e-21 | 6 |
lymphangioblast | 2.90e-21 | 6 |
endothelial cell of lymphatic vessel | 2.90e-21 | 6 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.08e-41 | 18 |
endothelium | 8.08e-41 | 18 |
cardiovascular system endothelium | 8.08e-41 | 18 |
simple squamous epithelium | 1.02e-32 | 22 |
squamous epithelium | 2.40e-28 | 25 |
vessel | 1.96e-26 | 68 |
circulatory system | 5.71e-25 | 112 |
vasculature | 3.26e-22 | 78 |
vascular system | 3.26e-22 | 78 |
splanchnic layer of lateral plate mesoderm | 1.73e-20 | 83 |
Showing 1 to 10 of 50 entries