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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
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Revision as of 17:24, 15 June 2012

Name:renal duct
Definition:"A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9]
Xrefs:
links:
ZFA:0005289
Comments:in ZFA this is defined as part of mesonephros

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0004120(mesoderm-derived structure),UBERON:0006554(urinary system structure)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0009201 (nephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006553 (renal duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268p4@Spink12
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_9b3409e528ac533dfd8475c41e23287dp3@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr9:56469136..56469145,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:56469136..56469145, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_9b3409e528ac533dfd8475c41e23287dp4@Defb20
3.28e-58FFCP PHASE2:Mm9::chr17:24865194..24865204,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:24865194..24865204, +
3.28e-58FFCP PHASE1:Mm9::chr11:101958876..101958883,+#_9b3409e528ac533dfd8475c41e23287dp@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:34813361..34813403, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597725..89597743,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:89597725..89597743, +
3.28e-58FFCP PHASE1:Mm9::chr7:75293847..75293851,+#_9b3409e528ac533dfd8475c41e23287dp@chr7:75293847..75293851, +
3.28e-58FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_9b3409e528ac533dfd8475c41e23287dp11@P4ha2
3.28e-58FFCP PHASE2:Mm9::chr4:106731469..106731481,-#_9b3409e528ac533dfd8475c41e23287dp@chr4:106731469..106731481, -
3.28e-58FFCP PHASE2:Mm9::chr14:51677155..51677162,-#_9b3409e528ac533dfd8475c41e23287dp5@Rnase12
3.28e-58FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:20419453..20419476, +
3.28e-58FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:50280181..50280192, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379477..31379481,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31379477..31379481, +
3.28e-58FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_9b3409e528ac533dfd8475c41e23287dp2@Wfdc9
3.28e-58FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21381141..21381155, -
3.28e-58FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chr5:31377177..31377184,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31377177..31377184, +
3.28e-58FFCP PHASE1:Mm9::chr4:33600466..33600491,-#_9b3409e528ac533dfd8475c41e23287dp@chr4:33600466..33600491, -
3.28e-58FFCP PHASE2:Mm9::chr1:39707572..39707583,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:39707572..39707583, +
3.28e-58FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_9b3409e528ac533dfd8475c41e23287dp5@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr13:21378968..21378988,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378968..21378988, -
3.28e-58FFCP PHASE2:Mm9::chr5:88272459..88272484,-#_9b3409e528ac533dfd8475c41e23287dp@chr5:88272459..88272484, -
3.28e-58FFCP PHASE1:Mm9::chr15:75347689..75347703,+#_9b3409e528ac533dfd8475c41e23287dp@chr15:75347689..75347703, +
3.28e-58FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26727675..26727681, -
3.28e-58FFCP PHASE2:Mm9::chr15:83143938..83143953,-#_9b3409e528ac533dfd8475c41e23287dp@chr15:83143938..83143953, -
3.28e-58FFCP PHASE2:Mm9::chr1:155698178..155698191,-#_9b3409e528ac533dfd8475c41e23287dp@chr1:155698178..155698191, -
3.28e-58FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_9b3409e528ac533dfd8475c41e23287dp@chr14:63611214..63611229, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_9b3409e528ac533dfd8475c41e23287dp3@Ido1
3.28e-58FFCP PHASE2:Mm9::chr5:112721323..112721328,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:112721323..112721328, +
3.28e-58FFCP PHASE2:Mm9::chr14:51670340..51670346,-#_9b3409e528ac533dfd8475c41e23287dp@chr14:51670340..51670346, -
3.28e-58FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr9:35651679..35651691,-#_9b3409e528ac533dfd8475c41e23287dp5@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr8:126604677..126604701,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:126604677..126604701, -
3.28e-58FFCP PHASE2:Mm9::chr9:26730625..26730636,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm1110
3.28e-58FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_9b3409e528ac533dfd8475c41e23287dp@chr18:46301295..46301302, -
3.28e-58FFCP PHASE2:Mm9::chr2:25348986..25348999,-#_9b3409e528ac533dfd8475c41e23287dp4@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr2:164434346..164434353,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:164434346..164434353, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378766..21378781,+#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378766..21378781, +
3.28e-58FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_9b3409e528ac533dfd8475c41e23287dp@chr19:17591760..17591765, +
3.28e-58FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_9b3409e528ac533dfd8475c41e23287dp4@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379306..21379315, -
3.28e-58FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:90155923..90155932, +
3.28e-58FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_9b3409e528ac533dfd8475c41e23287dp@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_9b3409e528ac533dfd8475c41e23287dp@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:25706249..25706254, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379098..21379104,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379098..21379104, -
3.28e-58FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:25752228..25752237, +
3.28e-58FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_9b3409e528ac533dfd8475c41e23287dp1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
3.28e-58FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_9b3409e528ac533dfd8475c41e23287dp@chr9:100350777..100350782, +
3.28e-58FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:87936238..87936249, +
3.28e-58FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:75866210..75866235, +
3.28e-58FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:126591032..126591039, +
3.28e-58FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:148625223..148625234, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:19141471..19141518, -
3.28e-58FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:110773718..110773729, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_9b3409e528ac533dfd8475c41e23287dp1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr12:16664775..16664784,+#_9b3409e528ac533dfd8475c41e23287dp@chr12:16664775..16664784, +
3.28e-58FFCP PHASE1:Mm9::chr17:35252614..35252635,-#_9b3409e528ac533dfd8475c41e23287dp3@Ly6g5b
3.28e-58FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:101959282..101959299, -
3.28e-58FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_9b3409e528ac533dfd8475c41e23287dp@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:100634942..100634968, +
3.28e-58FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:112721323..112721328, +
3.28e-58FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chr16:22547027..22547063,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_9b3409e528ac533dfd8475c41e23287dp3@Defb20
3.28e-58FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_9b3409e528ac533dfd8475c41e23287dp@chr6:83487114..83487124, -
3.28e-58FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_9b3409e528ac533dfd8475c41e23287dp@chr4:134893699..134893708, +
3.28e-58FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_9b3409e528ac533dfd8475c41e23287dp@chr14:103837894..103837900, +
3.28e-58FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_9b3409e528ac533dfd8475c41e23287dp@chr12:16664708..16664723, +
3.28e-58FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:50280181..50280192, +
3.28e-58FFCP PHASE2:Mm9::chrX:12571679..12571688,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:12571679..12571688, -
3.28e-58FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31379972..31379981, +
3.28e-58FFCP PHASE2:Mm9::chr13:21385729..21385768,+#_9b3409e528ac533dfd8475c41e23287dp@chr13:21385729..21385768, +
3.28e-58FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_9b3409e528ac533dfd8475c41e23287dp@chr15:54678902..54678911, -
3.28e-58FFCP PHASE1:Mm9::chr11:59845376..59845393,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:59845376..59845393, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31379437..31379448, +
3.28e-58FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_9b3409e528ac533dfd8475c41e23287dp@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_9b3409e528ac533dfd8475c41e23287dp3@Glb1l2
3.28e-58FFCP PHASE2:Mm9::chr18:44261480..44261486,+#_9b3409e528ac533dfd8475c41e23287dp@chr18:44261480..44261486, +
3.28e-58FFCP PHASE1:Mm9::chr18:74784728..74784738,+#_9b3409e528ac533dfd8475c41e23287dp@chr18:74784728..74784738, +
3.28e-58FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_9b3409e528ac533dfd8475c41e23287dp@chr14:51680551..51680555, -
3.28e-58FFCP PHASE1:Mm9::chr13:21379118..21379120,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379118..21379120, -
3.28e-58FFCP PHASE2:Mm9::chr2:25677632..25677636,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:25677632..25677636, -
3.28e-58FFCP PHASE2:Mm9::chr14:69116075..69116107,-#_9b3409e528ac533dfd8475c41e23287dp@chr14:69116075..69116107, -
3.28e-58FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:130496166..130496188, -
3.28e-58FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:75798097..75798101, -
3.28e-58FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr3:107731917..107731926,-#_9b3409e528ac533dfd8475c41e23287dp@chr3:107731917..107731926, -
3.28e-58FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:110773718..110773729, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_9b3409e528ac533dfd8475c41e23287dp4@Bpi
3.28e-58FFCP PHASE2:Mm9::chr3:103650817..103650825,+#_9b3409e528ac533dfd8475c41e23287dp@chr3:103650817..103650825, +
3.28e-58FFCP PHASE2:Mm9::chr11:101958844..101958851,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:101958844..101958851, -
3.28e-58FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:87936238..87936249, +
3.28e-58FFCP PHASE2:Mm9::chr1:155738967..155738974,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:155738967..155738974, +

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