FFCP PHASE1:Mm9::chr8:4214117..4214128,-: Difference between revisions
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|id=chr8:4214117..4214128,- | |id=chr8:4214117..4214128,- | ||
|ontology_enrichment_celltype=CL:0000117!9.26e-14!23;CL:0000337!9.26e-14!23;CL:0000540!2.02e-10!33;CL:0000047!2.02e-10!33;CL:0000031!2.02e-10!33;CL:0000404!2.02e-10!33;CL:0000393!6.11e-08!39;CL:0000211!6.11e-08!39;CL:0002319!1.18e-07!43;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44 | |ontology_enrichment_celltype=CL:0000117!9.26e-14!23;CL:0000337!9.26e-14!23;CL:0000540!2.02e-10!33;CL:0000047!2.02e-10!33;CL:0000031!2.02e-10!33;CL:0000404!2.02e-10!33;CL:0000393!6.11e-08!39;CL:0000211!6.11e-08!39;CL:0002319!1.18e-07!43;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,2.28e-24,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0000120,3.64e-07,3;CL:0002608,4.77e-07,3;CL:0002610,5.46e-07,3;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.92e-14!71;UBERON:0003075!9.92e-14!71;UBERON:0007284!9.92e-14!71;UBERON:0001017!4.82e-13!73;UBERON:0005743!4.82e-13!73;UBERON:0004121!6.14e-13!102;UBERON:0000924!6.14e-13!102;UBERON:0006601!6.14e-13!102;UBERON:0000033!1.04e-12!63;UBERON:0000073!2.06e-12!75;UBERON:0001016!2.06e-12!75;UBERON:0003056!1.23e-11!49;UBERON:0000955!5.56e-11!50;UBERON:0006238!5.56e-11!50;UBERON:0001049!2.79e-10!52;UBERON:0005068!2.79e-10!52;UBERON:0006241!2.79e-10!52;UBERON:0007135!2.79e-10!52;UBERON:0002616!2.98e-10!49;UBERON:0003080!1.51e-08!40;UBERON:0002780!5.07e-08!39;UBERON:0001890!5.07e-08!39;UBERON:0006240!5.07e-08!39;UBERON:0002020!1.30e-07!34;UBERON:0007811!1.38e-07!86;UBERON:0000153!8.78e-07!94 | |ontology_enrichment_uberon=UBERON:0002346!9.92e-14!71;UBERON:0003075!9.92e-14!71;UBERON:0007284!9.92e-14!71;UBERON:0001017!4.82e-13!73;UBERON:0005743!4.82e-13!73;UBERON:0004121!6.14e-13!102;UBERON:0000924!6.14e-13!102;UBERON:0006601!6.14e-13!102;UBERON:0000033!1.04e-12!63;UBERON:0000073!2.06e-12!75;UBERON:0001016!2.06e-12!75;UBERON:0003056!1.23e-11!49;UBERON:0000955!5.56e-11!50;UBERON:0006238!5.56e-11!50;UBERON:0001049!2.79e-10!52;UBERON:0005068!2.79e-10!52;UBERON:0006241!2.79e-10!52;UBERON:0007135!2.79e-10!52;UBERON:0002616!2.98e-10!49;UBERON:0003080!1.51e-08!40;UBERON:0002780!5.07e-08!39;UBERON:0001890!5.07e-08!39;UBERON:0006240!5.07e-08!39;UBERON:0002020!1.30e-07!34;UBERON:0007811!1.38e-07!86;UBERON:0000153!8.78e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.39e-15,5;UBERON:0002435,4.39e-15,5;UBERON:0000204,4.39e-15,5;UBERON:0010082,4.39e-15,5;UBERON:0002420,8.03e-10,8;UBERON:0007245,8.03e-10,8;UBERON:0010009,8.03e-10,8;UBERON:0010011,8.03e-10,8;UBERON:0000454,8.03e-10,8;UBERON:0004684,5.46e-07,3;UBERON:0002275,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.34243593645101,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.675029691658453,0.210324961351382,0,0,0.367472397644862,1.15014565221884,0,1.10115880999389,0.127687338085188,0,0.791317726381163,2.19570344645783,1.56274011167028,0,0,0.30559649555362,0.294628585473668,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.628271760564322,0.173824320192276,0.511430914660661,0,0,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0.452114453507145,0.476255494059295,0.512454881139399,0.187403449119458,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.140271639780637,0,0,0,0,0,0,0,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0.354680467284547,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.68741272937475,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.34243593645101,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.675029691658453,0.210324961351382,0,0,0.367472397644862,1.15014565221884,0,1.10115880999389,0.127687338085188,0,0.791317726381163,2.19570344645783,1.56274011167028,0,0,0.30559649555362,0.294628585473668,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.628271760564322,0.173824320192276,0.511430914660661,0,0,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0.452114453507145,0.476255494059295,0.512454881139399,0.187403449119458,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.140271639780637,0,0,0,0,0,0,0,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0.354680467284547,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.68741272937475,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:4214117..4214128,- | |short_description=p@chr8:4214117..4214128,- | ||
}} | }} |
Revision as of 18:38, 13 November 2012
Short description: | p@chr8:4214117..4214128, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:4214117..4214128, - |
Coexpression cluster: | MCL_coexpression_mm9:851 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 2.28e-24 | 3 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
granule cell | 3.64e-07 | 3 |
hippocampal neuron | 4.77e-07 | 3 |
raphe nuclei neuron | 5.46e-07 | 3 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 4.39e-15 | 5 |
striatum | 4.39e-15 | 5 |
ventral part of telencephalon | 4.39e-15 | 5 |
future corpus striatum | 4.39e-15 | 5 |
basal ganglion | 8.03e-10 | 8 |
nuclear complex of neuraxis | 8.03e-10 | 8 |
aggregate regional part of brain | 8.03e-10 | 8 |
collection of basal ganglia | 8.03e-10 | 8 |
cerebral subcortex | 8.03e-10 | 8 |
raphe nuclei | 5.46e-07 | 3 |
reticular formation | 5.46e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.