FFCP PHASE1:Mm9::chr6:78332174..78332190,+: Difference between revisions
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|id=chr6:78332174..78332190,+ | |id=chr6:78332174..78332190,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.58e-18!6;CL:0000677!2.58e-18!6;CL:0000212!2.58e-18!6;CL:0000584!2.58e-18!6;CL:0002563!5.94e-16!9;CL:0002251!5.94e-16!9;CL:0000075!1.28e-15!7;CL:0000066!9.86e-11!25;CL:0000473!2.68e-10!3;CL:0000627!2.68e-10!3;CL:0000682!2.68e-10!3;CL:0002076!3.25e-09!15 | |ontology_enrichment_celltype=CL:0000239!2.58e-18!6;CL:0000677!2.58e-18!6;CL:0000212!2.58e-18!6;CL:0000584!2.58e-18!6;CL:0002563!5.94e-16!9;CL:0002251!5.94e-16!9;CL:0000075!1.28e-15!7;CL:0000066!9.86e-11!25;CL:0000473!2.68e-10!3;CL:0000627!2.68e-10!3;CL:0000682!2.68e-10!3;CL:0002076!3.25e-09!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.44e-14,3;CL:0000239,1.96e-07,6;CL:0000677,1.96e-07,6;CL:0000584,1.96e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.08e-33!15;UBERON:0001242!3.93e-27!13;UBERON:0000060!3.93e-27!13;UBERON:0001262!3.93e-27!13;UBERON:0004786!3.93e-27!13;UBERON:0000160!1.53e-25!43;UBERON:0004923!1.17e-19!24;UBERON:0005409!1.68e-17!59;UBERON:0003350!5.94e-16!9;UBERON:0004808!5.94e-16!9;UBERON:0001277!5.94e-16!9;UBERON:0000485!6.83e-13!11;UBERON:0000331!1.29e-10!3;UBERON:0002116!1.29e-10!3;UBERON:0001204!1.29e-10!3;UBERON:0001168!1.29e-10!3;UBERON:0001007!1.49e-09!128;UBERON:0001555!1.49e-09!128;UBERON:0007026!1.49e-09!128;UBERON:0004119!2.47e-09!130;UBERON:0000925!2.47e-09!130;UBERON:0006595!2.47e-09!130;UBERON:0004921!1.14e-07!126;UBERON:0004185!1.14e-07!126;UBERON:0001962!1.56e-07!2;UBERON:0001961!1.56e-07!2;UBERON:0001744!1.56e-07!2 | |ontology_enrichment_uberon=UBERON:0000344!5.08e-33!15;UBERON:0001242!3.93e-27!13;UBERON:0000060!3.93e-27!13;UBERON:0001262!3.93e-27!13;UBERON:0004786!3.93e-27!13;UBERON:0000160!1.53e-25!43;UBERON:0004923!1.17e-19!24;UBERON:0005409!1.68e-17!59;UBERON:0003350!5.94e-16!9;UBERON:0004808!5.94e-16!9;UBERON:0001277!5.94e-16!9;UBERON:0000485!6.83e-13!11;UBERON:0000331!1.29e-10!3;UBERON:0002116!1.29e-10!3;UBERON:0001204!1.29e-10!3;UBERON:0001168!1.29e-10!3;UBERON:0001007!1.49e-09!128;UBERON:0001555!1.49e-09!128;UBERON:0007026!1.49e-09!128;UBERON:0004119!2.47e-09!130;UBERON:0000925!2.47e-09!130;UBERON:0006595!2.47e-09!130;UBERON:0004921!1.14e-07!126;UBERON:0004185!1.14e-07!126;UBERON:0001962!1.56e-07!2;UBERON:0001961!1.56e-07!2;UBERON:0001744!1.56e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.77e-23,31;UBERON:0000344,1.86e-18,15;UBERON:0002108,2.34e-18,4;UBERON:0000331,2.68e-14,3;UBERON:0002116,2.68e-14,3;UBERON:0001204,2.68e-14,3;UBERON:0001168,2.68e-14,3;UBERON:0005409,2.78e-14,47;UBERON:0001242,2.98e-12,13;UBERON:0001262,2.98e-12,13;UBERON:0004786,2.98e-12,13;UBERON:0004923,3.73e-11,24;UBERON:0001962,5.72e-10,2;UBERON:0001961,5.72e-10,2;UBERON:0001744,5.72e-10,2;UBERON:0002465,6.41e-07,3 | |||
|phase1_expression=0,1.74487703819681,0.909998478779072,6.35174843744343,6.01074875935617,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47978783821539,3.67054849707472,3.44539178469012,4.73838195774982,2.80112602491656,4.75058548640935,5.79669298447841,2.88249663851896,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,8.46241813323342,0,0,0,0,0,0,3.32170343081158,0,0.251335208800269,0,0,4.49409704327111,6.05186539649144,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,0.909998478779072,6.35174843744343,6.01074875935617,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47978783821539,3.67054849707472,3.44539178469012,4.73838195774982,2.80112602491656,4.75058548640935,5.79669298447841,2.88249663851896,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,8.46241813323342,0,0,0,0,0,0,3.32170343081158,0,0.251335208800269,0,0,4.49409704327111,6.05186539649144,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78332174..78332190,+ | |short_description=p@chr6:78332174..78332190,+ | ||
}} | }} |
Revision as of 20:35, 13 November 2012
Short description: | p@chr6:78332174..78332190, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78332174..78332190, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.44e-14 | 3 |
brush border epithelial cell | 1.96e-07 | 6 |
gut absorptive cell | 1.96e-07 | 6 |
enterocyte | 1.96e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.77e-23 | 31 |
mucosa | 1.86e-18 | 15 |
small intestine | 2.34e-18 | 4 |
ileal mucosa | 2.68e-14 | 3 |
ileum | 2.68e-14 | 3 |
mucosa of small intestine | 2.68e-14 | 3 |
wall of small intestine | 2.68e-14 | 3 |
gastrointestinal system | 2.78e-14 | 47 |
intestinal mucosa | 2.98e-12 | 13 |
wall of intestine | 2.98e-12 | 13 |
gastrointestinal system mucosa | 2.98e-12 | 13 |
organ component layer | 3.73e-11 | 24 |
gut-associated lymphoid tissue | 5.72e-10 | 2 |
mucosa-associated lymphoid tissue | 5.72e-10 | 2 |
lymphoid tissue | 5.72e-10 | 2 |
lymphoid system | 6.41e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.