FFCP PHASE1:Mm9::chr3:129525405..129525428,-: Difference between revisions
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|id=chr3:129525405..129525428,- | |id=chr3:129525405..129525428,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.32e-31!9;UBERON:0000019!1.32e-31!9;UBERON:0000047!1.32e-31!9;UBERON:0004088!1.32e-31!9;UBERON:0002104!1.32e-31!9;UBERON:0001456!1.32e-31!9;UBERON:0003072!1.32e-31!9;UBERON:0003071!1.32e-31!9;UBERON:0004128!1.32e-31!9;UBERON:0001444!1.40e-25!11;UBERON:0000020!2.56e-23!12;UBERON:0001032!2.56e-23!12;UBERON:0004456!2.56e-23!12;UBERON:0005085!2.10e-21!13;UBERON:0003056!8.65e-07!49 | |ontology_enrichment_uberon=UBERON:0000970!1.32e-31!9;UBERON:0000019!1.32e-31!9;UBERON:0000047!1.32e-31!9;UBERON:0004088!1.32e-31!9;UBERON:0002104!1.32e-31!9;UBERON:0001456!1.32e-31!9;UBERON:0003072!1.32e-31!9;UBERON:0003071!1.32e-31!9;UBERON:0004128!1.32e-31!9;UBERON:0001444!1.40e-25!11;UBERON:0000020!2.56e-23!12;UBERON:0001032!2.56e-23!12;UBERON:0004456!2.56e-23!12;UBERON:0005085!2.10e-21!13;UBERON:0003056!8.65e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.97e-77,9;UBERON:0000019,4.97e-77,9;UBERON:0000047,4.97e-77,9;UBERON:0010312,4.97e-77,9;UBERON:0004088,4.97e-77,9;UBERON:0002104,4.97e-77,9;UBERON:0001456,4.97e-77,9;UBERON:0003072,4.97e-77,9;UBERON:0004128,4.97e-77,9;UBERON:0003071,4.97e-77,9;UBERON:0001444,4.29e-63,11;UBERON:0000020,7.26e-58,12;UBERON:0001032,7.26e-58,12;UBERON:0004456,7.26e-58,12;UBERON:0000033,1.94e-53,13;UBERON:0005085,1.94e-53,13;UBERON:0007811,2.05e-19,36;UBERON:0000153,2.91e-16,43;UBERON:0003056,2.84e-14,49;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31486041475121,0.520481771850815,3.21862946206862,4.68161537493908,9.34369870581433,10.2054748726992,9.22418786050918,8.33945348581587,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.192075457214608,0,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31486041475121,0.520481771850815,3.21862946206862,4.68161537493908,9.34369870581433,10.2054748726992,9.22418786050918,8.33945348581587,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.192075457214608,0,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p1@Rrh | |short_description=p1@Rrh | ||
}} | }} |
Revision as of 11:29, 14 November 2012
Short description: | p1@Rrh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rrh_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 0bp_to_ENSMUST00000029648, ENSMUST00000078035, ENSMUST00000090295, ENSMUST00000171313, NM_009102, uc008ril.1, uc012cxr.1, uc012cxs.1_5end |
EntrezGene: | Rrh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.97e-77 | 9 |
camera-type eye | 4.97e-77 | 9 |
simple eye | 4.97e-77 | 9 |
immature eye | 4.97e-77 | 9 |
ocular region | 4.97e-77 | 9 |
visual system | 4.97e-77 | 9 |
face | 4.97e-77 | 9 |
optic cup | 4.97e-77 | 9 |
optic vesicle | 4.97e-77 | 9 |
eye primordium | 4.97e-77 | 9 |
subdivision of head | 4.29e-63 | 11 |
sense organ | 7.26e-58 | 12 |
sensory system | 7.26e-58 | 12 |
entire sense organ system | 7.26e-58 | 12 |
head | 1.94e-53 | 13 |
ectodermal placode | 1.94e-53 | 13 |
craniocervical region | 2.05e-19 | 36 |
anterior region of body | 2.91e-16 | 43 |
pre-chordal neural plate | 2.84e-14 | 49 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.