FFCP PHASE1:Mm9::chr12:16807779..16807820,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr12:16807779..16807820,- | |id=chr12:16807779..16807820,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.09e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!4.73e-14!26;UBERON:0000990!4.73e-14!26;UBERON:0003133!1.26e-12!24;UBERON:0000991!2.97e-09!18;UBERON:0005564!2.97e-09!18;UBERON:0004176!1.33e-08!17;UBERON:0009196!1.33e-08!17;UBERON:0009117!1.33e-08!17;UBERON:0002342!4.67e-08!10;UBERON:0005062!4.67e-08!10;UBERON:0003101!6.67e-08!16;UBERON:0000079!6.67e-08!16;UBERON:0000010!2.70e-07!11;UBERON:0003135!3.15e-07!15;UBERON:0003064!6.56e-07!14;UBERON:0000474!6.57e-07!9 | |ontology_enrichment_uberon=UBERON:0005156!4.73e-14!26;UBERON:0000990!4.73e-14!26;UBERON:0003133!1.26e-12!24;UBERON:0000991!2.97e-09!18;UBERON:0005564!2.97e-09!18;UBERON:0004176!1.33e-08!17;UBERON:0009196!1.33e-08!17;UBERON:0009117!1.33e-08!17;UBERON:0002342!4.67e-08!10;UBERON:0005062!4.67e-08!10;UBERON:0003101!6.67e-08!16;UBERON:0000079!6.67e-08!16;UBERON:0000010!2.70e-07!11;UBERON:0003135!3.15e-07!15;UBERON:0003064!6.56e-07!14;UBERON:0000474!6.57e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.81e-23,26;UBERON:0000990,1.81e-23,26;UBERON:0003133,4.98e-20,24;UBERON:0000991,2.05e-15,18;UBERON:0005564,2.05e-15,18;UBERON:0002369,4.05e-15,7;UBERON:0006858,4.05e-15,7;UBERON:0003064,4.31e-14,14;UBERON:0004176,7.84e-14,17;UBERON:0009196,7.84e-14,17;UBERON:0009117,7.84e-14,17;UBERON:0003101,3.59e-12,16;UBERON:0000079,3.59e-12,16;UBERON:0000474,4.64e-11,9;UBERON:0003135,1.35e-10,15;UBERON:0000010,1.15e-09,11;UBERON:0003134,2.46e-09,8;UBERON:0000926,2.68e-09,120;UBERON:0004120,2.68e-09,120;UBERON:0006603,2.68e-09,120;UBERON:0000473,3.07e-09,14;UBERON:0003100,7.80e-09,11;UBERON:0002410,4.09e-07,9;UBERON:0000992,5.63e-07,3;UBERON:0003886,6.65e-07,38 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,1.25896817975577,0.912392380975631,2.75320128242522,0,0,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.365950574409639,0,0.279182999001381,0,0,0,0,0,1.13589289999776,1.20914496170857,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,20.0396887737513,3.12273588179045,3.95805121805784,7.37969591219387,8.13902258984162,7.76085467095652,9.55066094105534,16.8092578059374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.305518091550949,0.622034853050465,1.76905930903572,0.210441855886474,1.04096354370163,0.459804208866946,0.540186389416048,0,0.748401490664606,0.896796041993948,0.937017245597288,0.258703370739016,1.29340795759705,0.567318240503458,0.175951124163949,0.219195732427575,0,0,0.205782136407943,3.78165106955137,0,0,0,0.828503090142008,0.469052119962192,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.528901133327089,0.213288250535234,1.39342003116263,0.902072229254653,1.00841762311671,0.889512175379481,0.570676878337677,0.474529061544512,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,1.51734320762465,1.25673363870702,1.1270773567308,0.814605311381257,0.581857461502877,0.841629838683823,0.126473074248515,0,0,0,0,0.83422552858047,0.786235980452812,0,0.405720242777006,0.964708639009667,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0.757965647081939,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0,0.585400943573396,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,1.26203287766503,0.780877488593277,1.29254038639679,2.15071918157297,2.00518806674155,3.67999490025482,0.809621403349789,0.876767573733936,1.58115111178609,0,21.149072696032,1.6025904330053,2.28041743095006,5.77395430403874,0,0.242780636154981,0.302323556964751,0,0.885905678642318,0.307435147943927,0.258428293168221,0,0,0,0,0,5.7874732978144,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0,0.704015124191131,0.42366414172764,7.27743713581374,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.690999869022119,0,0.158167996790568,0.813277868507395,0.216010681643603,0,0.218362563746178,0,0,0,0.129614973291793,0,0,7.47582730219894,4.96375471371293,9.52810822885833,10.3327858782185,11.4890165333729,16.0779416944683,10.9371683268918,2.62148361064277,0.966336483304024,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.358855426437903,0.167884616364078,0,3.94133198447482,7.69236821922513,10.0753138167161,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0,0.188626341386076,0.280924522409647,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.169229215783353,0.914639864363863,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0.701794825336225,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,1.25896817975577,0.912392380975631,2.75320128242522,0,0,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.365950574409639,0,0.279182999001381,0,0,0,0,0,1.13589289999776,1.20914496170857,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,20.0396887737513,3.12273588179045,3.95805121805784,7.37969591219387,8.13902258984162,7.76085467095652,9.55066094105534,16.8092578059374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.305518091550949,0.622034853050465,1.76905930903572,0.210441855886474,1.04096354370163,0.459804208866946,0.540186389416048,0,0.748401490664606,0.896796041993948,0.937017245597288,0.258703370739016,1.29340795759705,0.567318240503458,0.175951124163949,0.219195732427575,0,0,0.205782136407943,3.78165106955137,0,0,0,0.828503090142008,0.469052119962192,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.528901133327089,0.213288250535234,1.39342003116263,0.902072229254653,1.00841762311671,0.889512175379481,0.570676878337677,0.474529061544512,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,1.51734320762465,1.25673363870702,1.1270773567308,0.814605311381257,0.581857461502877,0.841629838683823,0.126473074248515,0,0,0,0,0.83422552858047,0.786235980452812,0,0.405720242777006,0.964708639009667,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0.757965647081939,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0,0.585400943573396,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,1.26203287766503,0.780877488593277,1.29254038639679,2.15071918157297,2.00518806674155,3.67999490025482,0.809621403349789,0.876767573733936,1.58115111178609,0,21.149072696032,1.6025904330053,2.28041743095006,5.77395430403874,0,0.242780636154981,0.302323556964751,0,0.885905678642318,0.307435147943927,0.258428293168221,0,0,0,0,0,5.7874732978144,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0,0.704015124191131,0.42366414172764,7.27743713581374,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.690999869022119,0,0.158167996790568,0.813277868507395,0.216010681643603,0,0.218362563746178,0,0,0,0.129614973291793,0,0,7.47582730219894,4.96375471371293,9.52810822885833,10.3327858782185,11.4890165333729,16.0779416944683,10.9371683268918,2.62148361064277,0.966336483304024,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.358855426437903,0.167884616364078,0,3.94133198447482,7.69236821922513,10.0753138167161,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0,0.188626341386076,0.280924522409647,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.169229215783353,0.914639864363863,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0.701794825336225,0,0,0.220591419119515,0 | ||
|short_description=p1@Greb1 | |short_description=p1@Greb1 | ||
}} | }} |
Revision as of 23:49, 14 November 2012
Short description: | p1@Greb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Greb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1101 |
Association with transcript: | -87bp_to_ENSMUST00000048064, ENSMUST00000161998, NM_015764, uc007nbz.1_5end |
EntrezGene: | Greb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 1.81e-23 | 26 |
reproductive system | 1.81e-23 | 26 |
reproductive organ | 4.98e-20 | 24 |
gonad | 2.05e-15 | 18 |
gonad primordium | 2.05e-15 | 18 |
adrenal gland | 4.05e-15 | 7 |
adrenal/interrenal gland | 4.05e-15 | 7 |
intermediate mesoderm | 4.31e-14 | 14 |
external genitalia | 7.84e-14 | 17 |
indifferent external genitalia | 7.84e-14 | 17 |
indifferent gonad | 7.84e-14 | 17 |
male organism | 3.59e-12 | 16 |
male reproductive system | 3.59e-12 | 16 |
female reproductive system | 4.64e-11 | 9 |
male reproductive organ | 1.35e-10 | 15 |
peripheral nervous system | 1.15e-09 | 11 |
female reproductive organ | 2.46e-09 | 8 |
mesoderm | 2.68e-09 | 120 |
mesoderm-derived structure | 2.68e-09 | 120 |
presumptive mesoderm | 2.68e-09 | 120 |
testis | 3.07e-09 | 14 |
female organism | 7.80e-09 | 11 |
autonomic nervous system | 4.09e-07 | 9 |
female gonad | 5.63e-07 | 3 |
body cavity precursor | 6.65e-07 | 38 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.