FFCP PHASE1:Mm9::chr2:74530022..74530033,+: Difference between revisions
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|id=chr2:74530022..74530033,+ | |id=chr2:74530022..74530033,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.93e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.97e-15!26;UBERON:0000990!1.97e-15!26;UBERON:0003133!5.72e-15!24;UBERON:0000489!7.10e-13!21;UBERON:0000991!5.38e-12!18;UBERON:0005564!5.38e-12!18;UBERON:0004176!5.74e-11!17;UBERON:0009196!5.74e-11!17;UBERON:0009117!5.74e-11!17;UBERON:0000474!7.62e-10!9;UBERON:0003100!1.72e-09!11;UBERON:0002113!4.04e-09!14;UBERON:0003918!4.04e-09!14;UBERON:0005095!4.04e-09!14;UBERON:0007687!4.04e-09!14;UBERON:0003134!1.95e-08!8;UBERON:0000473!5.02e-08!14;UBERON:0006554!1.20e-07!16;UBERON:0001948!1.71e-07!5;UBERON:0002315!1.71e-07!5;UBERON:0002102!1.94e-07!8;UBERON:0004710!1.94e-07!8;UBERON:0005419!1.94e-07!8;UBERON:0005417!1.94e-07!8;UBERON:0005729!1.94e-07!8;UBERON:0003135!2.49e-07!15;UBERON:0001008!4.80e-07!17 | |ontology_enrichment_uberon=UBERON:0005156!1.97e-15!26;UBERON:0000990!1.97e-15!26;UBERON:0003133!5.72e-15!24;UBERON:0000489!7.10e-13!21;UBERON:0000991!5.38e-12!18;UBERON:0005564!5.38e-12!18;UBERON:0004176!5.74e-11!17;UBERON:0009196!5.74e-11!17;UBERON:0009117!5.74e-11!17;UBERON:0000474!7.62e-10!9;UBERON:0003100!1.72e-09!11;UBERON:0002113!4.04e-09!14;UBERON:0003918!4.04e-09!14;UBERON:0005095!4.04e-09!14;UBERON:0007687!4.04e-09!14;UBERON:0003134!1.95e-08!8;UBERON:0000473!5.02e-08!14;UBERON:0006554!1.20e-07!16;UBERON:0001948!1.71e-07!5;UBERON:0002315!1.71e-07!5;UBERON:0002102!1.94e-07!8;UBERON:0004710!1.94e-07!8;UBERON:0005419!1.94e-07!8;UBERON:0005417!1.94e-07!8;UBERON:0005729!1.94e-07!8;UBERON:0003135!2.49e-07!15;UBERON:0001008!4.80e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.38e-24,21;UBERON:0002113,2.92e-21,14;UBERON:0003918,2.92e-21,14;UBERON:0011143,2.92e-21,14;UBERON:0005095,2.92e-21,14;UBERON:0007687,2.92e-21,14;UBERON:0006554,4.40e-20,18;UBERON:0001008,6.09e-19,19;UBERON:0002257,3.93e-12,3;UBERON:0000474,4.08e-11,9;UBERON:0003103,6.05e-11,43;UBERON:0005795,9.04e-10,4;UBERON:0000995,9.04e-10,4;UBERON:0003100,4.74e-09,11;UBERON:0005156,6.99e-09,26;UBERON:0000990,6.99e-09,26;UBERON:0003134,3.83e-08,8;UBERON:0003975,6.69e-08,5;UBERON:0001948,1.81e-07,5;UBERON:0002315,1.81e-07,5;UBERON:0003133,2.18e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,1.47314292736834,1.56608848879013,2.23679334990361,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0.646703978798527,1.89106080167819,1.05570674498369,0.876782929710299,0.278047249225598,0,0.411564272815887,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,1.16118335930219,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,1.89667900953082,1.02823661348756,0,2.24016460629846,1.16371492300575,1.61312385747733,2.97211724484009,1.62371162777562,2.04098346193787,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,1.30309567482861,3.46437258242324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,0.63549621259146,0,0,0.161464426695906,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0,2.8408143748356,0.992750942742586,0.972255941720238,1.54991788173277,0.844780627453891,2.46450201156083,0.911430693907651,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,2.43987218086537,2.74727436400898,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0,0.419226325255965,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,1.47314292736834,1.56608848879013,2.23679334990361,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0.646703978798527,1.89106080167819,1.05570674498369,0.876782929710299,0.278047249225598,0,0.411564272815887,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,1.16118335930219,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,1.89667900953082,1.02823661348756,0,2.24016460629846,1.16371492300575,1.61312385747733,2.97211724484009,1.62371162777562,2.04098346193787,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,1.30309567482861,3.46437258242324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,0.63549621259146,0,0,0.161464426695906,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0,2.8408143748356,0.992750942742586,0.972255941720238,1.54991788173277,0.844780627453891,2.46450201156083,0.911430693907651,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,2.43987218086537,2.74727436400898,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0,0.419226325255965,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p3@Hoxd10 | |short_description=p3@Hoxd10 | ||
}} | }} |
Revision as of 01:39, 15 November 2012
Short description: | p3@Hoxd10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hoxd10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1446 |
Association with transcript: | 17bp_to_NM_013554, uc008kdx.2_5end |
EntrezGene: | Hoxd10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.93e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.38e-24 | 21 |
kidney | 2.92e-21 | 14 |
kidney mesenchyme | 2.92e-21 | 14 |
upper urinary tract | 2.92e-21 | 14 |
kidney rudiment | 2.92e-21 | 14 |
kidney field | 2.92e-21 | 14 |
urinary system structure | 4.40e-20 | 18 |
renal system | 6.09e-19 | 19 |
ventral horn of spinal cord | 3.93e-12 | 3 |
female reproductive system | 4.08e-11 | 9 |
compound organ | 6.05e-11 | 43 |
embryonic uterus | 9.04e-10 | 4 |
uterus | 9.04e-10 | 4 |
female organism | 4.74e-09 | 11 |
reproductive structure | 6.99e-09 | 26 |
reproductive system | 6.99e-09 | 26 |
female reproductive organ | 3.83e-08 | 8 |
internal female genitalia | 6.69e-08 | 5 |
regional part of spinal cord | 1.81e-07 | 5 |
gray matter of spinal cord | 1.81e-07 | 5 |
reproductive organ | 2.18e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.