FFCP PHASE1:Mm9::chr12:109999594..109999610,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr12:109999594..109999610,- | |id=chr12:109999594..109999610,- | ||
|ontology_enrichment_celltype=CL:0000838!5.65e-08!12;CL:0002031!1.71e-07!25;CL:0000791!2.24e-07!9;CL:0000789!2.24e-07!9;CL:0002420!2.24e-07!9;CL:0002419!2.24e-07!9;CL:0000790!2.24e-07!9;CL:0000542!3.50e-07!13;CL:0000051!3.50e-07!13;CL:0000084!5.46e-07!11;CL:0000827!5.46e-07!11 | |ontology_enrichment_celltype=CL:0000838!5.65e-08!12;CL:0002031!1.71e-07!25;CL:0000791!2.24e-07!9;CL:0000789!2.24e-07!9;CL:0002420!2.24e-07!9;CL:0002419!2.24e-07!9;CL:0000790!2.24e-07!9;CL:0000542!3.50e-07!13;CL:0000051!3.50e-07!13;CL:0000084!5.46e-07!11;CL:0000827!5.46e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.79e-10,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.70e-30,3;DOID:4045,5.70e-30,3;DOID:0050686,2.24e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.09e-14!42;UBERON:0003408!6.17e-14!24;UBERON:0000065!2.63e-13!41;UBERON:0002370!6.92e-13!23;UBERON:0000974!6.92e-13!23;UBERON:0004807!6.92e-13!23;UBERON:0005058!6.92e-13!23;UBERON:0003351!6.92e-13!23;UBERON:0009113!6.92e-13!23;UBERON:0003295!6.92e-13!23;UBERON:0009722!6.92e-13!23;UBERON:0005562!6.92e-13!23;UBERON:0007690!6.92e-13!23;UBERON:0004177!7.48e-13!29;UBERON:0006562!3.96e-12!24;UBERON:0001557!3.96e-12!24;UBERON:0001042!3.96e-12!24;UBERON:0008814!3.96e-12!24;UBERON:0009145!3.96e-12!24;UBERON:0002193!1.58e-11!48;UBERON:0002390!1.89e-11!45;UBERON:0003061!1.89e-11!45;UBERON:0000072!3.33e-10!27;UBERON:0003104!5.47e-09!131;UBERON:0009142!5.47e-09!131;UBERON:0002405!1.08e-08!70;UBERON:0003081!3.06e-08!88;UBERON:0005057!3.16e-08!51;UBERON:0005911!5.30e-08!69;UBERON:0000063!1.48e-07!35;UBERON:0000926!2.70e-07!193;UBERON:0004120!2.70e-07!193;UBERON:0006603!2.70e-07!193;UBERON:0001041!7.47e-07!92 | |ontology_enrichment_uberon=UBERON:0001004!3.09e-14!42;UBERON:0003408!6.17e-14!24;UBERON:0000065!2.63e-13!41;UBERON:0002370!6.92e-13!23;UBERON:0000974!6.92e-13!23;UBERON:0004807!6.92e-13!23;UBERON:0005058!6.92e-13!23;UBERON:0003351!6.92e-13!23;UBERON:0009113!6.92e-13!23;UBERON:0003295!6.92e-13!23;UBERON:0009722!6.92e-13!23;UBERON:0005562!6.92e-13!23;UBERON:0007690!6.92e-13!23;UBERON:0004177!7.48e-13!29;UBERON:0006562!3.96e-12!24;UBERON:0001557!3.96e-12!24;UBERON:0001042!3.96e-12!24;UBERON:0008814!3.96e-12!24;UBERON:0009145!3.96e-12!24;UBERON:0002193!1.58e-11!48;UBERON:0002390!1.89e-11!45;UBERON:0003061!1.89e-11!45;UBERON:0000072!3.33e-10!27;UBERON:0003104!5.47e-09!131;UBERON:0009142!5.47e-09!131;UBERON:0002405!1.08e-08!70;UBERON:0003081!3.06e-08!88;UBERON:0005057!3.16e-08!51;UBERON:0005911!5.30e-08!69;UBERON:0000063!1.48e-07!35;UBERON:0000926!2.70e-07!193;UBERON:0004120!2.70e-07!193;UBERON:0006603!2.70e-07!193;UBERON:0001041!7.47e-07!92 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.99e-11,1;UBERON:0001097,8.99e-11,1;UBERON:0003968,8.99e-11,1;UBERON:0001467,8.99e-11,1;UBERON:0001134,1.79e-10,9;UBERON:0002036,1.79e-10,9;UBERON:0002385,1.79e-10,9;UBERON:0000486,1.79e-10,9;UBERON:0007503,1.79e-10,9;UBERON:0001015,1.79e-10,9;UBERON:0002329,1.79e-10,9;UBERON:0003082,1.79e-10,9;UBERON:0003059,1.79e-10,9;UBERON:0007282,1.79e-10,9;UBERON:0004290,1.79e-10,9;UBERON:0009618,1.79e-10,9;UBERON:0000383,1.73e-09,10;UBERON:0007524,1.11e-08,11;UBERON:0003077,1.11e-08,11;UBERON:0007285,1.11e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0.159544317990673,0.342401459862411,0.699363219351979,0,0.202475267389826,0,0.630924330716475,0.411343300817216,0.84877930359606,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53356935326434,1.5626706890476,1.57057123192139,18.2351761289614,2.04913645487534,3.39857247121808,0,0,0,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0.29688427812965,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.480781798079875,0.886137163047463,0.403865799792591,0.457240839929999,0.604957110821043,0.38983152295901,0.769694733122636,1.05189211963412,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0.159544317990673,0.342401459862411,0.699363219351979,0,0.202475267389826,0,0.630924330716475,0.411343300817216,0.84877930359606,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53356935326434,1.5626706890476,1.57057123192139,18.2351761289614,2.04913645487534,3.39857247121808,0,0,0,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0.29688427812965,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.480781798079875,0.886137163047463,0.403865799792591,0.457240839929999,0.604957110821043,0.38983152295901,0.769694733122636,1.05189211963412,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr12:109999594..109999610,- | |short_description=p@chr12:109999594..109999610,- | ||
}} | }} |
Revision as of 05:00, 15 November 2012
Short description: | p@chr12:109999594..109999610, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109999594..109999610, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.79e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 8.99e-11 | 1 |
axillary lymph node | 8.99e-11 | 1 |
peripheral lymph node | 8.99e-11 | 1 |
shoulder | 8.99e-11 | 1 |
skeletal muscle tissue | 1.79e-10 | 9 |
striated muscle tissue | 1.79e-10 | 9 |
muscle tissue | 1.79e-10 | 9 |
multilaminar epithelium | 1.79e-10 | 9 |
epithelial vesicle | 1.79e-10 | 9 |
musculature | 1.79e-10 | 9 |
somite | 1.79e-10 | 9 |
myotome | 1.79e-10 | 9 |
presomitic mesoderm | 1.79e-10 | 9 |
presumptive segmental plate | 1.79e-10 | 9 |
dermomyotome | 1.79e-10 | 9 |
trunk paraxial mesoderm | 1.79e-10 | 9 |
musculature of body | 1.73e-09 | 10 |
dense mesenchyme tissue | 1.11e-08 | 11 |
paraxial mesoderm | 1.11e-08 | 11 |
presumptive paraxial mesoderm | 1.11e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.70e-30 | 3 |
muscle cancer | 5.70e-30 | 3 |
organ system cancer | 2.24e-15 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.