FFCP PHASE1:Hg19::chr5:149532703..149532711,+: Difference between revisions
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|ontology_enrichment_celltype_v019_2=CL:0002575,7.41e-67,2;CL:0000669,4.28e-34,4;CL:0002549,1.07e-17,2;CL:0002590,2.31e-12,3;CL:0002564,3.24e-12,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr5:149532703..149532711,+ | |short_description=p@chr5:149532703..149532711,+ | ||
}} | }} |
Revision as of 20:02, 15 November 2012
Short description: | p@chr5:149532703..149532711, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:149532703..149532711, + |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 7.41e-67 | 2 |
pericyte cell | 4.28e-34 | 4 |
fibroblast of choroid plexus | 1.07e-17 | 2 |
smooth muscle cell of the brain vasculature | 2.31e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 3.11e-27 | 5 |
vascular plexus | 1.07e-17 | 2 |
ventricle of nervous system | 1.07e-17 | 2 |
choroid plexus | 1.07e-17 | 2 |
brain ventricle | 1.07e-17 | 2 |
ventricular system of brain | 1.07e-17 | 2 |
ventricular system of central nervous system | 1.07e-17 | 2 |
vasculature of organ | 5.42e-13 | 11 |
nucleus pulposus | 3.24e-12 | 3 |
axial mesoderm | 3.24e-12 | 3 |
notochord | 3.24e-12 | 3 |
chordamesoderm | 3.24e-12 | 3 |
intervertebral cartilage | 7.49e-08 | 5 |
symphysis | 7.49e-08 | 5 |
nonsynovial joint | 7.49e-08 | 5 |
fibrous joint | 7.49e-08 | 5 |
cartilaginous joint | 7.49e-08 | 5 |
developing mesenchymal condensation | 7.49e-08 | 5 |
pre-cartilage condensation | 7.49e-08 | 5 |
cartilaginous condensation | 7.49e-08 | 5 |
cartilage element | 7.49e-08 | 5 |
post-cranial axial skeletal system | 7.49e-08 | 5 |
vertebral column | 7.49e-08 | 5 |
intervertebral disk | 7.49e-08 | 5 |
intervertebral joint | 7.49e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.