FFCP PHASE1:Hg19::chr2:189899879..189899890,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!8.47e-32!180;CL:0000057!2.28e-15!75;CL:0000680!2.90e-12!57;CL:0000056!2.90e-12!57;CL:0000355!2.90e-12!57;CL:0000187!4.07e-11!54;CL:0000048!5.62e-10!430;CL:0000723!1.31e-09!436;CL:0000393!1.49e-09!60;CL:0000211!1.49e-09!60;CL:0000183!2.86e-09!59;CL:0000034!4.50e-09!444;CL:0002371!4.12e-08!591;CL:0000192!4.62e-08!42;CL:0000514!4.62e-08!42;CL:0000144!1.27e-07!625;CL:0000359!1.53e-07!32;CL:0000499!1.54e-07!27;CL:0002620!6.51e-07!23;CL:0002334!6.91e-07!12 | |ontology_enrichment_celltype=CL:0000055!8.47e-32!180;CL:0000057!2.28e-15!75;CL:0000680!2.90e-12!57;CL:0000056!2.90e-12!57;CL:0000355!2.90e-12!57;CL:0000187!4.07e-11!54;CL:0000048!5.62e-10!430;CL:0000723!1.31e-09!436;CL:0000393!1.49e-09!60;CL:0000211!1.49e-09!60;CL:0000183!2.86e-09!59;CL:0000034!4.50e-09!444;CL:0002371!4.12e-08!591;CL:0000192!4.62e-08!42;CL:0000514!4.62e-08!42;CL:0000144!1.27e-07!625;CL:0000359!1.53e-07!32;CL:0000499!1.54e-07!27;CL:0002620!6.51e-07!23;CL:0002334!6.91e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002559;6.04e-12;5!CL:0000135;7.44e-12;3!CL:0000388;7.44e-12;3!CL:0000346;1.02e-11;3!CL:1000428;1.02e-11;3!CL:0002579;1.02e-11;3!CL:0000138;1.08e-09;6!CL:0000499;7.78e-09;28!CL:0000327;5.68e-08;15!CL:0002334;1.59e-07;12!CL:0002620;7.09e-07;23 | |ontology_enrichment_celltype_v019=CL:0002559;6.04e-12;5!CL:0000135;7.44e-12;3!CL:0000388;7.44e-12;3!CL:0000346;1.02e-11;3!CL:1000428;1.02e-11;3!CL:0002579;1.02e-11;3!CL:0000138;1.08e-09;6!CL:0000499;7.78e-09;28!CL:0000327;5.68e-08;15!CL:0002334;1.59e-07;12!CL:0002620;7.09e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.33e-12,76;CL:0002559,2.00e-12,5;CL:0000346,4.83e-12,3;CL:1000428,4.83e-12,3;CL:0000135,6.50e-12,3;CL:0000388,6.50e-12,3;CL:0002579,3.00e-11,3;CL:0000058,1.99e-09,6;CL:0000138,1.99e-09,6;CL:0000499,7.61e-09,28;CL:0000327,5.81e-08,15;CL:0002334,2.45e-07,12;CL:0000134,4.60e-07,354;CL:0000048,4.61e-07,427;CL:0000723,7.88e-07,433;CL:0002320,9.27e-07,361;CL:0002620,9.29e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.62e-12!83;UBERON:0002329!1.62e-12!83;UBERON:0003077!1.62e-12!83;UBERON:0003059!1.62e-12!83;UBERON:0007282!1.62e-12!83;UBERON:0009618!1.62e-12!83;UBERON:0007285!1.62e-12!83;UBERON:0004290!4.22e-12!70;UBERON:0001134!1.00e-11!61;UBERON:0002036!1.00e-11!61;UBERON:0003082!1.00e-11!61;UBERON:0002385!5.69e-11!63;UBERON:0001015!5.69e-11!63;UBERON:0000383!5.69e-11!63;UBERON:0000486!5.21e-09!82;UBERON:0005256!2.03e-08!143;UBERON:0002097!3.48e-07!40;UBERON:0002100!4.87e-07!216;UBERON:0004872!5.00e-07!84;UBERON:0002199!6.75e-07!45;UBERON:0002416!6.75e-07!45;UBERON:0003688!8.52e-07!6;UBERON:0002358!8.52e-07!6;UBERON:0003684!8.52e-07!6;UBERON:0001178!8.52e-07!6 | |ontology_enrichment_uberon=UBERON:0000914!1.62e-12!83;UBERON:0002329!1.62e-12!83;UBERON:0003077!1.62e-12!83;UBERON:0003059!1.62e-12!83;UBERON:0007282!1.62e-12!83;UBERON:0009618!1.62e-12!83;UBERON:0007285!1.62e-12!83;UBERON:0004290!4.22e-12!70;UBERON:0001134!1.00e-11!61;UBERON:0002036!1.00e-11!61;UBERON:0003082!1.00e-11!61;UBERON:0002385!5.69e-11!63;UBERON:0001015!5.69e-11!63;UBERON:0000383!5.69e-11!63;UBERON:0000486!5.21e-09!82;UBERON:0005256!2.03e-08!143;UBERON:0002097!3.48e-07!40;UBERON:0002100!4.87e-07!216;UBERON:0004872!5.00e-07!84;UBERON:0002199!6.75e-07!45;UBERON:0002416!6.75e-07!45;UBERON:0003688!8.52e-07!6;UBERON:0002358!8.52e-07!6;UBERON:0003684!8.52e-07!6;UBERON:0001178!8.52e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.21e-15;6!UBERON:0002358;2.21e-15;6!UBERON:0003684;2.21e-15;6!UBERON:0001178;2.21e-15;6!UBERON:0002073;6.04e-12;5!UBERON:0007846;7.44e-12;3!UBERON:0000043;7.44e-12;3!UBERON:0007845;7.44e-12;3!UBERON:0000412;1.02e-11;3!UBERON:0001992;1.02e-11;3!UBERON:0004457;3.78e-10;9!UBERON:0000042;3.78e-10;9!UBERON:0002097;2.39e-08;41 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.21e-15;6!UBERON:0002358;2.21e-15;6!UBERON:0003684;2.21e-15;6!UBERON:0001178;2.21e-15;6!UBERON:0002073;6.04e-12;5!UBERON:0007846;7.44e-12;3!UBERON:0000043;7.44e-12;3!UBERON:0007845;7.44e-12;3!UBERON:0000412;1.02e-11;3!UBERON:0001992;1.02e-11;3!UBERON:0004457;3.78e-10;9!UBERON:0000042;3.78e-10;9!UBERON:0002097;2.39e-08;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.62e-15,6;UBERON:0002358,8.62e-15,6;UBERON:0003684,8.62e-15,6;UBERON:0001178,8.62e-15,6;UBERON:0002073,2.00e-12,5;UBERON:0005086,2.00e-12,5;UBERON:0000412,4.83e-12,3;UBERON:0001992,4.83e-12,3;UBERON:0007846,6.50e-12,3;UBERON:0000043,6.50e-12,3;UBERON:0007845,6.50e-12,3;UBERON:0002097,2.47e-10,41;UBERON:0002199,6.19e-09,46;UBERON:0002416,6.19e-09,46;UBERON:0002384,1.51e-07,371;UBERON:0004457,3.02e-07,12;UBERON:0000042,3.02e-07,12 | |||
|phase1_expression=0.181678379270557,1.07050261945492,1.12763523276777,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0.994192127183747,0.672325146451775,1.20538905604795,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,1.0843174571537,1.00267582127178,1.30361867064741,0.795285947051099,1.45990461090791,0,0,0.263504357079378,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0.886413581652058,0.529636723252875,2.0078563452417,0.354668382198357,0.560677600142307,0,1.2333377420858,0.311211035399766,0.538842688278752,0.326923806226917,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0.494533858557114,0,0,0.673344455816265,0,0,0,0.919463387397059,0,0.340296549480063,0.358779271377724,1.92201649936711,1.05965950579781,0.300091096084402,0.103052529238439,1.03056216018252,1.30281799432113,1.18143432568886,0.292311015483596,2.01947019395292,0.644349290496095,0.484938170456436,2.13005755509969,0.906768884048762,0.508681776931463,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,2.57296375277154,1.38134921352481,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0.845302752556,0.797814349754612,0,0,0,0,1.57275793023962,2.17048642156577,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0.958499421966331,3.44585807502342,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0,1.45579603071565,4.99601168632053,0.946214490203608,0.702848489956279,0.601892199455438,0,0,1.32845119707087,0.737476674166813,0.347534457872331,0,0,0,0,0,0,0,0,1.24053903909388,0.920771839728375,2.24528075546459,1.15325234330131,1.02341449813341,2.0911009748669,0,0.462629081407967,0.177561725313127,0,0.519254429183621,0.348631135379878,0,0.40101294060657,0,0.918515585316854,0.910455840033585,0.786746489756545,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.732555718546747,0.907604499126468,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0.435050081742686,0.340906509664404,0.356128142586949,0.165284915360978,0.192190067365106,0.127612712494584,0,0,2.20368642781448,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.571890581771475,0,0,0.318203247925937,0.78494864019923,0.539617372749944,0.823611089208164,0.589062011728432,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,1.27264888758341,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.563391205064483,0.286822704408103,0.687743287091848,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0.441280633457501,0,0,0.596143835108969,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.543616824294456,0.418411385249333,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0.429226048136571,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,2.15144807199414,0,0,0,0,0,0,0.979762080328227,0,0,0.851940108927109,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.732157589411779,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.934853239388898,0,0.378806010550178,1.50940741051545,0,0.228840068396924,0.453692771289717,0.777186002913902,0.887130899937803,0.955780602982214,0,1.08684069813382,0,1.59505028734797,0,1.50257608997218,0.380805212168795,0,1.09109195521536,1.18151612746737,0,0.796191777397232,0.800055529326307,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0.489473409012935,0,0.926404341482917,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,1.05802783107205,2.7562092961788,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0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| ||
|short_description=p@chr2:189899879..189899890,- | |short_description=p@chr2:189899879..189899890,- | ||
}} | }} |
Revision as of 02:12, 17 November 2012
Short description: | p@chr2:189899879..189899890, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:189899879..189899890, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.33e-12 | 76 |
hair follicle cell | 2.00e-12 | 5 |
hair follicle dermal papilla cell | 4.83e-12 | 3 |
stem cell of epidermis | 4.83e-12 | 3 |
fibrocyte | 6.50e-12 | 3 |
tendon cell | 6.50e-12 | 3 |
omentum preadipocyte | 3.00e-11 | 3 |
chondroblast | 1.99e-09 | 6 |
chondrocyte | 1.99e-09 | 6 |
stromal cell | 7.61e-09 | 28 |
extracellular matrix secreting cell | 5.81e-08 | 15 |
preadipocyte | 2.45e-07 | 12 |
mesenchymal cell | 4.60e-07 | 354 |
multi fate stem cell | 4.61e-07 | 427 |
somatic stem cell | 7.88e-07 | 433 |
connective tissue cell | 9.27e-07 | 361 |
skin fibroblast | 9.29e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.62e-15 | 6 |
peritoneum | 8.62e-15 | 6 |
abdominal cavity | 8.62e-15 | 6 |
visceral peritoneum | 8.62e-15 | 6 |
hair follicle | 2.00e-12 | 5 |
hair follicle placode | 2.00e-12 | 5 |
dermal papilla | 4.83e-12 | 3 |
papillary layer of dermis | 4.83e-12 | 3 |
dense regular connective tissue | 6.50e-12 | 3 |
tendon | 6.50e-12 | 3 |
regular connective tissue | 6.50e-12 | 3 |
skin of body | 2.47e-10 | 41 |
integument | 6.19e-09 | 46 |
integumental system | 6.19e-09 | 46 |
connective tissue | 1.51e-07 | 371 |
cavity lining | 3.02e-07 | 12 |
serous membrane | 3.02e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.