FFCP PHASE1:Hg19::chr5:121409731..121409737,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!5.30e-21!75;CL:0000055!9.43e-18!180;CL:0002620!1.52e-14!23;CL:0000144!1.58e-10!625;CL:0000048!2.98e-10!430;CL:0000723!9.20e-10!436;CL:0002334!9.70e-10!12;CL:0000034!3.89e-09!444;CL:0000499!7.24e-09!27;CL:0000134!8.00e-09!358;CL:0000548!2.28e-08!679;CL:0000004!2.28e-08!679;CL:0000255!2.28e-08!679;CL:0002320!2.94e-08!365;CL:0000012!3.52e-08!682;CL:0000219!4.30e-08!390;CL:0002371!2.06e-07!591 | |ontology_enrichment_celltype=CL:0000057!5.30e-21!75;CL:0000055!9.43e-18!180;CL:0002620!1.52e-14!23;CL:0000144!1.58e-10!625;CL:0000048!2.98e-10!430;CL:0000723!9.20e-10!436;CL:0002334!9.70e-10!12;CL:0000034!3.89e-09!444;CL:0000499!7.24e-09!27;CL:0000134!8.00e-09!358;CL:0000548!2.28e-08!679;CL:0000004!2.28e-08!679;CL:0000255!2.28e-08!679;CL:0002320!2.94e-08!365;CL:0000012!3.52e-08!682;CL:0000219!4.30e-08!390;CL:0002371!2.06e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.77e-16;3!CL:0000388;1.77e-16;3!CL:0002334;5.61e-10;12!CL:0002615;5.72e-08;3!CL:0002579;2.42e-07;3!CL:0002620;2.95e-07;23 | |ontology_enrichment_celltype_v019=CL:0000135;1.77e-16;3!CL:0000388;1.77e-16;3!CL:0002334;5.61e-10;12!CL:0002615;5.72e-08;3!CL:0002579;2.42e-07;3!CL:0002620;2.95e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.87e-16,3;CL:0000388,1.87e-16,3;CL:0000057,2.56e-13,76;CL:0002334,4.41e-10,12;CL:0002615,6.24e-08,3;CL:0002579,1.81e-07,3;CL:0002620,2.36e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.58e-11!14;DOID:17!6.30e-08!5;DOID:450!6.30e-08!5;DOID:66!6.30e-08!5;DOID:423!6.30e-08!5;DOID:0080000!6.30e-08!5;DOID:11722!6.30e-08!5 | |ontology_enrichment_disease=DOID:2394!1.58e-11!14;DOID:17!6.30e-08!5;DOID:450!6.30e-08!5;DOID:66!6.30e-08!5;DOID:423!6.30e-08!5;DOID:0080000!6.30e-08!5;DOID:11722!6.30e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.65e-12;14!DOID:17;1.03e-09;5!DOID:450;1.03e-09;5!DOID:66;1.03e-09;5!DOID:423;1.03e-09;5!DOID:0080000;1.03e-09;5!DOID:11722;1.03e-09;5!DOID:0060084;1.39e-07;3!DOID:127;1.39e-07;3!DOID:193;2.58e-07;29 | |ontology_enrichment_disease_v019=DOID:2394;5.65e-12;14!DOID:17;1.03e-09;5!DOID:450;1.03e-09;5!DOID:66;1.03e-09;5!DOID:423;1.03e-09;5!DOID:0080000;1.03e-09;5!DOID:11722;1.03e-09;5!DOID:0060084;1.39e-07;3!DOID:127;1.39e-07;3!DOID:193;2.58e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.20e-12,14;DOID:17,7.77e-10,5;DOID:450,7.77e-10,5;DOID:66,7.77e-10,5;DOID:423,7.77e-10,5;DOID:0080000,7.77e-10,5;DOID:11722,7.77e-10,5;DOID:0060084,1.07e-07,3;DOID:127,1.07e-07,3;DOID:193,2.15e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.59e-09!6;UBERON:0002358!1.59e-09!6;UBERON:0003684!1.59e-09!6;UBERON:0001178!1.59e-09!6;UBERON:0002199!5.64e-08!45;UBERON:0002416!5.64e-08!45;UBERON:0002384!5.92e-08!375;UBERON:0004457!2.09e-07!12;UBERON:0000042!2.09e-07!12;UBERON:0002097!2.28e-07!40 | |ontology_enrichment_uberon=UBERON:0003688!1.59e-09!6;UBERON:0002358!1.59e-09!6;UBERON:0003684!1.59e-09!6;UBERON:0001178!1.59e-09!6;UBERON:0002199!5.64e-08!45;UBERON:0002416!5.64e-08!45;UBERON:0002384!5.92e-08!375;UBERON:0004457!2.09e-07!12;UBERON:0000042!2.09e-07!12;UBERON:0002097!2.28e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.77e-16;3!UBERON:0000043;1.77e-16;3!UBERON:0007845;1.77e-16;3!UBERON:0003688;1.22e-13;6!UBERON:0002358;1.22e-13;6!UBERON:0003684;1.22e-13;6!UBERON:0001178;1.22e-13;6!UBERON:0005406;5.78e-11;2!UBERON:0004457;4.00e-09;9!UBERON:0000042;4.00e-09;9 | |ontology_enrichment_uberon_v019=UBERON:0007846;1.77e-16;3!UBERON:0000043;1.77e-16;3!UBERON:0007845;1.77e-16;3!UBERON:0003688;1.22e-13;6!UBERON:0002358;1.22e-13;6!UBERON:0003684;1.22e-13;6!UBERON:0001178;1.22e-13;6!UBERON:0005406;5.78e-11;2!UBERON:0004457;4.00e-09;9!UBERON:0000042;4.00e-09;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.87e-16,3;UBERON:0000043,1.87e-16,3;UBERON:0007845,1.87e-16,3;UBERON:0003688,9.88e-14,6;UBERON:0002358,9.88e-14,6;UBERON:0003684,9.88e-14,6;UBERON:0001178,9.88e-14,6;UBERON:0005406,3.89e-11,2;UBERON:0004457,6.75e-07,12;UBERON:0000042,6.75e-07,12 | |||
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|short_description=p@chr5:121409731..121409737,- | |short_description=p@chr5:121409731..121409737,- | ||
}} | }} |
Revision as of 05:40, 18 November 2012
Short description: | p@chr5:121409731..121409737, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:121409731..121409737, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.87e-16 | 3 |
tendon cell | 1.87e-16 | 3 |
fibroblast | 2.56e-13 | 76 |
preadipocyte | 4.41e-10 | 12 |
adipocyte of omentum tissue | 6.24e-08 | 3 |
omentum preadipocyte | 1.81e-07 | 3 |
skin fibroblast | 2.36e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.87e-16 | 3 |
tendon | 1.87e-16 | 3 |
regular connective tissue | 1.87e-16 | 3 |
omentum | 9.88e-14 | 6 |
peritoneum | 9.88e-14 | 6 |
abdominal cavity | 9.88e-14 | 6 |
visceral peritoneum | 9.88e-14 | 6 |
perirenal fat | 3.89e-11 | 2 |
cavity lining | 6.75e-07 | 12 |
serous membrane | 6.75e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.20e-12 | 14 |
musculoskeletal system disease | 7.77e-10 | 5 |
myotonic disease | 7.77e-10 | 5 |
muscle tissue disease | 7.77e-10 | 5 |
myopathy | 7.77e-10 | 5 |
muscular disease | 7.77e-10 | 5 |
myotonic dystrophy | 7.77e-10 | 5 |
cell type benign neoplasm | 1.07e-07 | 3 |
leiomyoma | 1.07e-07 | 3 |
reproductive organ cancer | 2.15e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.