FFCP PHASE1:Hg19::chr1:6534668..6534704,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000242!2.55e-21!2;CL:0000039!1.97e-13!7;CL:0000586!1.97e-13!7;CL:0000167!1.31e-11!1;CL:0000164!1.31e-11!1;CL:0000502!1.31e-11!1;CL:0000172!1.31e-11!1;CL:0000173!1.31e-11!1;CL:0002351!1.31e-11!1;CL:0002553!1.78e-11!1;CL:0000312!4.32e-09!5;CL:0000240!1.02e-07!6;CL:0000311!1.02e-07!6;CL:0000079!1.02e-07!6;CL:0000237!1.02e-07!6;CL:0000036!1.02e-07!6;CL:0000357!1.02e-07!6;CL:0000114!1.02e-07!6 | |ontology_enrichment_celltype=CL:0000242!2.55e-21!2;CL:0000039!1.97e-13!7;CL:0000586!1.97e-13!7;CL:0000167!1.31e-11!1;CL:0000164!1.31e-11!1;CL:0000502!1.31e-11!1;CL:0000172!1.31e-11!1;CL:0000173!1.31e-11!1;CL:0002351!1.31e-11!1;CL:0002553!1.78e-11!1;CL:0000312!4.32e-09!5;CL:0000240!1.02e-07!6;CL:0000311!1.02e-07!6;CL:0000079!1.02e-07!6;CL:0000237!1.02e-07!6;CL:0000036!1.02e-07!6;CL:0000357!1.02e-07!6;CL:0000114!1.02e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000167;7.05e-34;1!CL:0000164;7.05e-34;1!CL:0000502;7.05e-34;1!CL:0000172;7.05e-34;1!CL:0000173;7.05e-34;1!CL:0000123;6.48e-18;2!CL:0000242;6.48e-18;2!CL:0000312;5.73e-08;5!CL:0000240;7.58e-07;6!CL:0000311;7.58e-07;6!CL:0000079;7.58e-07;6!CL:0000237;7.58e-07;6 | |ontology_enrichment_celltype_v019=CL:0000167;7.05e-34;1!CL:0000164;7.05e-34;1!CL:0000502;7.05e-34;1!CL:0000172;7.05e-34;1!CL:0000173;7.05e-34;1!CL:0000123;6.48e-18;2!CL:0000242;6.48e-18;2!CL:0000312;5.73e-08;5!CL:0000240;7.58e-07;6!CL:0000311;7.58e-07;6!CL:0000079;7.58e-07;6!CL:0000237;7.58e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.06e-34,1;CL:0000164,7.06e-34,1;CL:0000502,7.06e-34,1;CL:0000172,7.06e-34,1;CL:0000173,7.06e-34,1;CL:0002351,7.06e-34,1;CL:0000242,7.67e-18,2;CL:0000312,6.13e-08,5;CL:0000240,8.02e-07,6;CL:0000311,8.02e-07,6;CL:0000079,8.02e-07,6;CL:0000237,8.02e-07,6;CL:0000036,8.02e-07,6;CL:0000357,8.02e-07,6;CL:0000114,8.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;7.05e-34;1!CL:0000357;7.58e-07;6!CL:0000114;7.58e-07;6 | |ontology_enrichment_development_v019=CL:0002351;7.05e-34;1!CL:0000357;7.58e-07;6!CL:0000114;7.58e-07;6 | ||
|ontology_enrichment_disease=DOID:4430!1.31e-11!1;DOID:3095!1.60e-07!22;DOID:2994!1.60e-07!22 | |ontology_enrichment_disease=DOID:4430!1.31e-11!1;DOID:3095!1.60e-07!22;DOID:2994!1.60e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:4430;7.05e-34;1!DOID:5409;1.22e-09;4!DOID:4362;7.01e-08;5!DOID:3095;5.91e-07;22!DOID:2994;5.91e-07;22!DOID:169;8.97e-07;6 | |ontology_enrichment_disease_v019=DOID:4430;7.05e-34;1!DOID:5409;1.22e-09;4!DOID:4362;7.01e-08;5!DOID:3095;5.91e-07;22!DOID:2994;5.91e-07;22!DOID:169;8.97e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,7.06e-34,1;DOID:5409,1.12e-09,4;DOID:4362,7.49e-08,5;DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22;DOID:169,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002581!6.00e-11!1 | |ontology_enrichment_uberon=UBERON:0002581!6.00e-11!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;8.97e-07;6!UBERON:0001560;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000002;8.97e-07;6!UBERON:0001560;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,9.49e-07,6;UBERON:0001560,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0.795803100645473,0,0,0,3.77407108916684,0,0,3.76253837089218,0,1.41405928260976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,1.65410819162721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0.795803100645473,0,0,0,3.77407108916684,0,0,3.76253837089218,0,1.41405928260976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,1.65410819162721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:6534668..6534704,- | |short_description=p@chr1:6534668..6534704,- | ||
}} | }} |
Revision as of 01:11, 19 November 2012
Short description: | p@chr1:6534668..6534704, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:6534668..6534704, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.06e-34 | 1 |
enteroendocrine cell | 7.06e-34 | 1 |
type D enteroendocrine cell | 7.06e-34 | 1 |
somatostatin secreting cell | 7.06e-34 | 1 |
pancreatic D cell | 7.06e-34 | 1 |
progenitor cell of endocrine pancreas | 7.06e-34 | 1 |
Merkel cell | 7.67e-18 | 2 |
keratinocyte | 6.13e-08 | 5 |
stratified squamous epithelial cell | 8.02e-07 | 6 |
keratin accumulating cell | 8.02e-07 | 6 |
stratified epithelial cell | 8.02e-07 | 6 |
keratinizing barrier epithelial cell | 8.02e-07 | 6 |
epithelial fate stem cell | 8.02e-07 | 6 |
stratified epithelial stem cell | 8.02e-07 | 6 |
surface ectodermal cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 9.49e-07 | 6 |
neck of organ | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.06e-34 | 1 |
lung small cell carcinoma | 1.12e-09 | 4 |
cervical cancer | 7.49e-08 | 5 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |
neuroendocrine tumor | 8.97e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.