FFCP PHASE1:Hg19::chr10:113975134..113975163,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000136!4.44e-19!15;CL:0000181!1.83e-07!12;CL:0000417!1.83e-07!12;CL:0000668!1.83e-07!12;CL:0000414!1.83e-07!12;CL:0000412!1.83e-07!12;CL:0000182!1.83e-07!12 | |ontology_enrichment_celltype=CL:0000136!4.44e-19!15;CL:0000181!1.83e-07!12;CL:0000417!1.83e-07!12;CL:0000668!1.83e-07!12;CL:0000414!1.83e-07!12;CL:0000412!1.83e-07!12;CL:0000182!1.83e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.49e-28;13!CL:0000182;5.18e-10;12!CL:0002521;6.72e-08;3!CL:0002615;9.99e-08;3 | |ontology_enrichment_celltype_v019=CL:0000136;3.49e-28;13!CL:0000182;5.18e-10;12!CL:0002521;6.72e-08;3!CL:0002615;9.99e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.84e-24,15;CL:0000182,5.29e-10,12;CL:0002521,6.72e-08,3;CL:0002615,1.02e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.94e-11;31!UBERON:0004161;1.02e-10;11!UBERON:0009497;7.78e-09;13 | |ontology_enrichment_development_v019=UBERON:0003104;7.94e-11;31!UBERON:0004161;1.02e-10;11!UBERON:0009497;7.78e-09;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-14!115;UBERON:0002107!1.41e-08!19;UBERON:0006925!1.41e-08!19;UBERON:0008836!1.41e-08!19;UBERON:0005057!4.38e-08!26;UBERON:0009854!9.08e-08!23;UBERON:0001013!2.82e-07!14;UBERON:0008835!6.55e-07!22;UBERON:0003894!6.55e-07!22;UBERON:0009497!8.62e-07!25;UBERON:0000015!8.62e-07!25;UBERON:0002423!8.62e-07!25;UBERON:0006235!8.62e-07!25;UBERON:0004161!8.62e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.93e-14!115;UBERON:0002107!1.41e-08!19;UBERON:0006925!1.41e-08!19;UBERON:0008836!1.41e-08!19;UBERON:0005057!4.38e-08!26;UBERON:0009854!9.08e-08!23;UBERON:0001013!2.82e-07!14;UBERON:0008835!6.55e-07!22;UBERON:0003894!6.55e-07!22;UBERON:0009497!8.62e-07!25;UBERON:0000015!8.62e-07!25;UBERON:0002423!8.62e-07!25;UBERON:0006235!8.62e-07!25;UBERON:0004161!8.62e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.96e-09;19!UBERON:0006925;2.96e-09;19!UBERON:0003688;3.01e-09;6!UBERON:0002358;3.01e-09;6!UBERON:0003684;3.01e-09;6!UBERON:0001178;3.01e-09;6!UBERON:0001443;1.42e-08;11!UBERON:0002365;3.40e-08;31!UBERON:0002330;3.40e-08;31!UBERON:0002423;5.91e-08;25!UBERON:0002190;6.72e-08;3!UBERON:0000310;4.65e-07;10!UBERON:0006947;5.64e-07;3!UBERON:0004054;5.64e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.96e-09;19!UBERON:0006925;2.96e-09;19!UBERON:0003688;3.01e-09;6!UBERON:0002358;3.01e-09;6!UBERON:0003684;3.01e-09;6!UBERON:0001178;3.01e-09;6!UBERON:0001443;1.42e-08;11!UBERON:0002365;3.40e-08;31!UBERON:0002330;3.40e-08;31!UBERON:0002423;5.91e-08;25!UBERON:0002190;6.72e-08;3!UBERON:0000310;4.65e-07;10!UBERON:0006947;5.64e-07;3!UBERON:0004054;5.64e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.42e-14,114;UBERON:0002107,3.02e-09,19;UBERON:0006925,3.02e-09,19;UBERON:0008836,3.02e-09,19;UBERON:0003688,3.17e-09,6;UBERON:0002358,3.17e-09,6;UBERON:0003684,3.17e-09,6;UBERON:0001178,3.17e-09,6;UBERON:0009854,6.32e-09,23;UBERON:0001443,1.39e-08,11;UBERON:0002365,1.74e-08,31;UBERON:0002330,1.74e-08,31;UBERON:0009497,6.01e-08,25;UBERON:0000015,6.01e-08,25;UBERON:0002423,6.01e-08,25;UBERON:0006235,6.01e-08,25;UBERON:0004161,6.01e-08,25;UBERON:0002190,6.72e-08,3;UBERON:0009569,8.92e-08,112;UBERON:0008835,1.10e-07,22;UBERON:0003894,1.10e-07,22;UBERON:0009856,1.32e-07,26;UBERON:0000310,4.52e-07,10;UBERON:0006947,5.04e-07,3;UBERON:0004054,5.04e-07,3;UBERON:0002417,5.76e-07,60;UBERON:0000916,5.76e-07,60 | |||
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| ||
|short_description=p2@GPAM | |short_description=p2@GPAM | ||
}} | }} |
Revision as of 03:00, 19 November 2012
Short description: | p2@GPAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GPAM_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000480130_5end |
EntrezGene: | GPAM |
HGNC: | 24865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.84e-24 | 15 |
hepatocyte | 5.29e-10 | 12 |
subcutaneous fat cell | 6.72e-08 | 3 |
adipocyte of omentum tissue | 1.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.42e-14 | 114 |
liver | 3.02e-09 | 19 |
digestive gland | 3.02e-09 | 19 |
liver bud | 3.02e-09 | 19 |
omentum | 3.17e-09 | 6 |
peritoneum | 3.17e-09 | 6 |
abdominal cavity | 3.17e-09 | 6 |
visceral peritoneum | 3.17e-09 | 6 |
digestive tract diverticulum | 6.32e-09 | 23 |
chest | 1.39e-08 | 11 |
exocrine gland | 1.74e-08 | 31 |
exocrine system | 1.74e-08 | 31 |
epithelium of foregut-midgut junction | 6.01e-08 | 25 |
anatomical boundary | 6.01e-08 | 25 |
hepatobiliary system | 6.01e-08 | 25 |
foregut-midgut junction | 6.01e-08 | 25 |
septum transversum | 6.01e-08 | 25 |
subcutaneous adipose tissue | 6.72e-08 | 3 |
subdivision of trunk | 8.92e-08 | 112 |
hepatic diverticulum | 1.10e-07 | 22 |
liver primordium | 1.10e-07 | 22 |
sac | 1.32e-07 | 26 |
breast | 4.52e-07 | 10 |
male genital duct | 5.04e-07 | 3 |
internal male genitalia | 5.04e-07 | 3 |
abdominal segment of trunk | 5.76e-07 | 60 |
abdomen | 5.76e-07 | 60 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.