FFCP PHASE1:Hg19::chr22:45809446..45809455,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002535!1.19e-08!2 | |ontology_enrichment_celltype=CL:0002535!1.19e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.45e-26;2!CL:0002553;1.10e-13;1!CL:0002563;2.66e-13;4!CL:0002253;1.75e-07;2!CL:1000415;1.75e-07;2 | |ontology_enrichment_celltype_v019=CL:0002535;2.45e-26;2!CL:0002553;1.10e-13;1!CL:0002563;2.66e-13;4!CL:0002253;1.75e-07;2!CL:1000415;1.75e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.78e-26,2;CL:0002553,1.25e-13,1;CL:0002563,2.08e-13,4;CL:0002253,1.45e-07,2;CL:1000415,1.99e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.53e-14;1 | |ontology_enrichment_development_v019=UBERON:0008425;4.53e-14;1 | ||
|ontology_enrichment_disease=DOID:4362!8.77e-12!5;DOID:305!2.51e-10!106;DOID:162!3.52e-10!235;DOID:14566!8.55e-10!239;DOID:0050687!7.60e-09!143;DOID:0050686!1.53e-08!137 | |ontology_enrichment_disease=DOID:4362!8.77e-12!5;DOID:305!2.51e-10!106;DOID:162!3.52e-10!235;DOID:14566!8.55e-10!239;DOID:0050687!7.60e-09!143;DOID:0050686!1.53e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:4362;3.91e-11;5 | |ontology_enrichment_disease_v019=DOID:4362;3.91e-11;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,4.12e-11,5;DOID:305,1.38e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000002!8.06e-10!6;UBERON:0001560!8.06e-10!6;UBERON:0006955!1.19e-08!2;UBERON:0004801!1.19e-08!2;UBERON:0003350!5.82e-07!5 | |ontology_enrichment_uberon=UBERON:0000002!8.06e-10!6;UBERON:0001560!8.06e-10!6;UBERON:0006955!1.19e-08!2;UBERON:0004801!1.19e-08!2;UBERON:0003350!5.82e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.45e-26;2!UBERON:0004801;2.45e-26;2!UBERON:0001242;2.66e-13;4!UBERON:0001262;2.66e-13;4!UBERON:0004786;2.66e-13;4!UBERON:0004808;2.66e-13;4!UBERON:0001277;2.66e-13;4!UBERON:0000002;1.99e-09;6!UBERON:0001560;1.99e-09;6!UBERON:0005911;4.57e-08;36!UBERON:0000485;5.47e-08;7!UBERON:0003929;5.47e-08;7!UBERON:0000473;4.28e-07;8!UBERON:0003350;4.28e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0006955;2.45e-26;2!UBERON:0004801;2.45e-26;2!UBERON:0001242;2.66e-13;4!UBERON:0001262;2.66e-13;4!UBERON:0004786;2.66e-13;4!UBERON:0004808;2.66e-13;4!UBERON:0001277;2.66e-13;4!UBERON:0000002;1.99e-09;6!UBERON:0001560;1.99e-09;6!UBERON:0005911;4.57e-08;36!UBERON:0000485;5.47e-08;7!UBERON:0003929;5.47e-08;7!UBERON:0000473;4.28e-07;8!UBERON:0003350;4.28e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.78e-26,2;UBERON:0004801,2.78e-26,2;UBERON:0001242,2.08e-13,4;UBERON:0001262,2.08e-13,4;UBERON:0004786,2.08e-13,4;UBERON:0004808,2.08e-13,4;UBERON:0001277,2.08e-13,4;UBERON:0000002,2.07e-09,6;UBERON:0001560,2.07e-09,6;UBERON:0003350,3.78e-07,8;UBERON:0000473,4.41e-07,8;UBERON:0005911,7.42e-07,82 | |||
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| ||
|short_description=p3@SMC1B | |short_description=p3@SMC1B | ||
}} | }} |
Revision as of 03:13, 19 November 2012
Short description: | p3@SMC1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SMC1B_5end |
Coexpression cluster: | C2648_transitionalcell_acute_testis_small_breast_argyrophil_epidermoid |
Association with transcript: | 0bp_to_ENST00000357450_5end |
EntrezGene: | SMC1B |
HGNC: | 11112 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.78e-26 | 2 |
lung fibroblast | 1.25e-13 | 1 |
intestinal epithelial cell | 2.08e-13 | 4 |
epithelial cell of large intestine | 1.45e-07 | 2 |
epithelial cell of gall bladder | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.78e-26 | 2 |
cervix epithelium | 2.78e-26 | 2 |
intestinal mucosa | 2.08e-13 | 4 |
wall of intestine | 2.08e-13 | 4 |
gastrointestinal system mucosa | 2.08e-13 | 4 |
gastrointestinal system epithelium | 2.08e-13 | 4 |
intestinal epithelium | 2.08e-13 | 4 |
uterine cervix | 2.07e-09 | 6 |
neck of organ | 2.07e-09 | 6 |
epithelium of mucosa | 3.78e-07 | 8 |
testis | 4.41e-07 | 8 |
endo-epithelium | 7.42e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.12e-11 | 5 |
carcinoma | 1.38e-08 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.