FFCP PHASE1:Hg19::chr5:142623955..142623962,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.64e-08!254;CL:0000223!4.78e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.64e-08!254;CL:0000223!4.78e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000083;1.89e-10;4 | |ontology_enrichment_celltype_v019=CL:0000083;1.89e-10;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.62e-10,4;CL:0000076,1.58e-08,63;CL:0000223,4.53e-08,58;CL:0000066,3.63e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006238;8.68e-10;10!UBERON:0007123;5.79e-08;5 | |ontology_enrichment_development_v019=UBERON:0006238;8.68e-10;10!UBERON:0007123;5.79e-08;5 | ||
|ontology_enrichment_disease=DOID:305!3.65e-21!106;DOID:0050687!4.10e-20!143;DOID:162!1.11e-19!235;DOID:14566!2.38e-19!239;DOID:1749!6.38e-12!14;DOID:120!9.02e-09!27;DOID:299!3.88e-08!25;DOID:193!8.14e-08!29;DOID:0050686!5.22e-07!137 | |ontology_enrichment_disease=DOID:305!3.65e-21!106;DOID:0050687!4.10e-20!143;DOID:162!1.11e-19!235;DOID:14566!2.38e-19!239;DOID:1749!6.38e-12!14;DOID:120!9.02e-09!27;DOID:299!3.88e-08!25;DOID:193!8.14e-08!29;DOID:0050686!5.22e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.15e-28;14!DOID:170;1.26e-11;6!DOID:1793;1.89e-10;4!DOID:4074;1.37e-09;2!DOID:4905;1.37e-09;2!DOID:3498;1.37e-09;2!DOID:3910;1.59e-09;2!DOID:4929;1.59e-09;2!DOID:3093;6.08e-09;11!DOID:3908;2.71e-08;5 | |ontology_enrichment_disease_v019=DOID:1749;1.15e-28;14!DOID:170;1.26e-11;6!DOID:1793;1.89e-10;4!DOID:4074;1.37e-09;2!DOID:4905;1.37e-09;2!DOID:3498;1.37e-09;2!DOID:3910;1.59e-09;2!DOID:4929;1.59e-09;2!DOID:3093;6.08e-09;11!DOID:3908;2.71e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,6.43e-29,14;DOID:305,4.41e-17,106;DOID:0050687,2.93e-16,143;DOID:162,4.66e-16,235;DOID:14566,1.49e-15,239;DOID:170,1.25e-11,6;DOID:1793,1.62e-10,4;DOID:4929,8.75e-10,2;DOID:4074,1.23e-09,2;DOID:4905,1.23e-09,2;DOID:3498,1.23e-09,2;DOID:3910,1.29e-09,2;DOID:3093,7.40e-09,11;DOID:3908,2.26e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001048!3.37e-07!168;UBERON:0000344!5.85e-07!12 | |ontology_enrichment_uberon=UBERON:0001048!3.37e-07!168;UBERON:0000344!5.85e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.89e-10;4!UBERON:0004785;2.89e-10;4!UBERON:0004903;1.59e-09;2!UBERON:0002173;1.59e-09;2!UBERON:0002186;1.59e-09;2!UBERON:0002046;5.79e-08;5!UBERON:0001264;5.49e-07;10!UBERON:0000974;5.66e-07;6!UBERON:0000344;7.06e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0003343;2.89e-10;4!UBERON:0004785;2.89e-10;4!UBERON:0004903;1.59e-09;2!UBERON:0002173;1.59e-09;2!UBERON:0002186;1.59e-09;2!UBERON:0002046;5.79e-08;5!UBERON:0001264;5.49e-07;10!UBERON:0000974;5.66e-07;6!UBERON:0000344;7.06e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.29e-10,4;UBERON:0004785,2.29e-10,4;UBERON:0004903,1.29e-09,2;UBERON:0002173,1.29e-09,2;UBERON:0002186,1.29e-09,2;UBERON:0002046,6.02e-08,5;UBERON:0004117,6.02e-08,5;UBERON:0007689,6.02e-08,5;UBERON:0007123,6.02e-08,5;UBERON:0003091,6.02e-08,5;UBERON:0001264,5.20e-07,10;UBERON:0000344,6.40e-07,20 | |||
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| ||
|short_description=p@chr5:142623955..142623962,+ | |short_description=p@chr5:142623955..142623962,+ | ||
}} | }} |
Revision as of 04:51, 19 November 2012
Short description: | p@chr5:142623955..142623962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:142623955..142623962, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.62e-10 | 4 |
squamous epithelial cell | 1.58e-08 | 63 |
endodermal cell | 4.53e-08 | 58 |
epithelial cell | 3.63e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.29e-10 | 4 |
respiratory system mucosa | 2.29e-10 | 4 |
bronchoalveolar duct junction | 1.29e-09 | 2 |
alveolar duct | 1.29e-09 | 2 |
bronchiole | 1.29e-09 | 2 |
thyroid gland | 6.02e-08 | 5 |
pharyngeal pouch | 6.02e-08 | 5 |
thyroid diverticulum | 6.02e-08 | 5 |
pharyngeal pouch 2 | 6.02e-08 | 5 |
thyroid primordium | 6.02e-08 | 5 |
pancreas | 5.20e-07 | 10 |
mucosa | 6.40e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.43e-29 | 14 |
carcinoma | 4.41e-17 | 106 |
cell type cancer | 2.93e-16 | 143 |
cancer | 4.66e-16 | 235 |
disease of cellular proliferation | 1.49e-15 | 239 |
endocrine gland cancer | 1.25e-11 | 6 |
pancreatic cancer | 1.62e-10 | 4 |
tubular adenocarcinoma | 8.75e-10 | 2 |
pancreas adenocarcinoma | 1.23e-09 | 2 |
pancreatic carcinoma | 1.23e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.23e-09 | 2 |
lung adenocarcinoma | 1.29e-09 | 2 |
nervous system cancer | 7.40e-09 | 11 |
non-small cell lung carcinoma | 2.26e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.