FFCP PHASE1:Hg19::chr11:16629650..16629667,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002319!3.48e-08!25;CL:0000242!7.06e-07!2 | |ontology_enrichment_celltype=CL:0002319!3.48e-08!25;CL:0000242!7.06e-07!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!1.67e-07!10 | |ontology_enrichment_disease=DOID:171!1.67e-07!10 | ||
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|ontology_enrichment_disease_v019_2=DOID:171,5.69e-55,10;DOID:3095,3.21e-25,22;DOID:2994,3.21e-25,22;DOID:3193,1.65e-12,2;DOID:962,1.65e-12,2;DOID:1192,8.96e-09,3 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.65e-12,2;UBERON:0000007,3.62e-12,2;UBERON:0002346,4.40e-09,86 | |||
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| ||
|short_description=p22@SOX6 | |short_description=p22@SOX6 | ||
}} | }} |
Revision as of 13:03, 19 November 2012
Short description: | p22@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_SOX6_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -376bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.65e-12 | 2 |
pituitary gland | 3.62e-12 | 2 |
neurectoderm | 4.40e-09 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.69e-55 | 10 |
germ cell and embryonal cancer | 3.21e-25 | 22 |
germ cell cancer | 3.21e-25 | 22 |
peripheral nerve sheath neoplasm | 1.65e-12 | 2 |
neurofibroma | 1.65e-12 | 2 |
peripheral nervous system neoplasm | 8.96e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.