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Coexpression cluster:C42: Difference between revisions

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|tfbs_overrepresentation_for_novel_motifs=0.0799737,0.0013055,0.0216968,1.31751,1.91175,0.975623,0.00165492,0.553845,1.43724,0.00724684,0.0187319,0.783795,0.000225437,0.0637599,0.38466,0.244589,0.113541,1.84529,0.000456819,0.329748,0.520609,0.00136475,8.09202e-05,0.296452,0.196595,0.061062,0.0771589,0.107418,6.87774e-06,0.126495,0.165484,0.381276,0.00369739,0.0111251,0.00178316,0.0712157,6.94311e-07,0.000338154,0.121384,0.00052363,0.942526,0.118909,0.069398,2.012,0.00463735,0.00187076,0.119929,0.0548537,0.641904,0.121871,0.0767772,0.0116466,0.0443726,0.328104,1.42637,0.0247606,2.08542,0.020329,0.0372726,0.0109035,0.0169378,0.000680311,0.182079,0.0210574,0.0069329,0.000325002,1.211,0.593132,0.841802,0.140297,0.0181337,2.37756,1.21457e-13,2.15369,1.39936e-05,0.00163902,0.833547,0.367387,2.44687,3.59833,0.758192,0.0800315,0.633232,1.34104,0.0780703,0,0.0620053,1.02516,0.0397553,0.125084,0.188768,0.126487,2.10778,1.13217,0.0339644,3.793,0.222637,0.286363,0.0043136,0.0223078,0.2817,0.964331,0.0973989,1.63837,0.276409,0.000208542,0.00389403,0.13337,0.000898782,5.48561e-07,0.835062,0.0194583,0.0178081,0.777113,0.142152,0.0942214,1.10952e-05,1.12948,0.0249135,1.30805,2.4993,0.0197819,0.0379282,0.453566,0.488348,0.177305,2.52156,0.0325896,0.0219416,1.43335,0.363994,0.364778,0.7399,1.17525,0.961114,0.0123542,0.0776129,1.72771,0.0594667,0.417261,0.459934,0.125924,3.39356,2.1539,0.00363879,0.071198,1.54999,0.299304,0.0244144,0.0105317,2.97934e-08,0,0.749344,0.00186588,0.647088,0.163195,0.50012,0.073047,1.00899,4.78163e-06,0.00869804,0.108472,0.145166,0.00223564,0.755039,0.922735,0.030848,0.394264,0
|tfbs_overrepresentation_for_novel_motifs=0.0799737,0.0013055,0.0216968,1.31751,1.91175,0.975623,0.00165492,0.553845,1.43724,0.00724684,0.0187319,0.783795,0.000225437,0.0637599,0.38466,0.244589,0.113541,1.84529,0.000456819,0.329748,0.520609,0.00136475,8.09202e-05,0.296452,0.196595,0.061062,0.0771589,0.107418,6.87774e-06,0.126495,0.165484,0.381276,0.00369739,0.0111251,0.00178316,0.0712157,6.94311e-07,0.000338154,0.121384,0.00052363,0.942526,0.118909,0.069398,2.012,0.00463735,0.00187076,0.119929,0.0548537,0.641904,0.121871,0.0767772,0.0116466,0.0443726,0.328104,1.42637,0.0247606,2.08542,0.020329,0.0372726,0.0109035,0.0169378,0.000680311,0.182079,0.0210574,0.0069329,0.000325002,1.211,0.593132,0.841802,0.140297,0.0181337,2.37756,1.21457e-13,2.15369,1.39936e-05,0.00163902,0.833547,0.367387,2.44687,3.59833,0.758192,0.0800315,0.633232,1.34104,0.0780703,0,0.0620053,1.02516,0.0397553,0.125084,0.188768,0.126487,2.10778,1.13217,0.0339644,3.793,0.222637,0.286363,0.0043136,0.0223078,0.2817,0.964331,0.0973989,1.63837,0.276409,0.000208542,0.00389403,0.13337,0.000898782,5.48561e-07,0.835062,0.0194583,0.0178081,0.777113,0.142152,0.0942214,1.10952e-05,1.12948,0.0249135,1.30805,2.4993,0.0197819,0.0379282,0.453566,0.488348,0.177305,2.52156,0.0325896,0.0219416,1.43335,0.363994,0.364778,0.7399,1.17525,0.961114,0.0123542,0.0776129,1.72771,0.0594667,0.417261,0.459934,0.125924,3.39356,2.1539,0.00363879,0.071198,1.54999,0.299304,0.0244144,0.0105317,2.97934e-08,0,0.749344,0.00186588,0.647088,0.163195,0.50012,0.073047,1.00899,4.78163e-06,0.00869804,0.108472,0.145166,0.00223564,0.755039,0.922735,0.030848,0.394264,0
|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;0.421532,MA0006.1;0.00351436,MA0007.1;0.250117,MA0009.1;3.08049,MA0014.1;3.47158e-15,MA0017.1;0.339713,MA0019.1;0.0252885,MA0024.1;0.267824,MA0025.1;0.418501,MA0027.1;0.834963,MA0028.1;0.000192682,MA0029.1;1.27531,MA0030.1;0.569594,MA0031.1;0.790245,MA0038.1;0.645874,MA0040.1;1.89483,MA0041.1;1.57927,MA0042.1;2.73941,MA0043.1;0.27126,MA0046.1;0.547657,MA0048.1;5.5514e-09,MA0050.1;0.00866295,MA0051.1;0.0160215,MA0052.1;0.0769421,MA0055.1;0.00197522,MA0056.1;0,MA0057.1;0.241822,MA0058.1;0.372062,MA0059.1;0.363442,MA0060.1;1.40599e-13,MA0061.1;0.260087,MA0063.1;0,MA0066.1;0.00921146,MA0067.1;0.0810922,MA0068.1;3.22041,MA0069.1;0.0750212,MA0070.1;1.42138,MA0071.1;0.24791,MA0072.1;0.48052,MA0073.1;4.68775e-09,MA0074.1;0.162927,MA0076.1;1.62484e-06,MA0077.1;1.07232,MA0078.1;2.47484,MA0081.1;0.298122,MA0083.1;0.173728,MA0084.1;0.46912,MA0087.1;1.10358,MA0088.1;0.020928,MA0089.1;0,MA0090.1;0.608928,MA0091.1;0.0569395,MA0092.1;0.240016,MA0093.1;0.47823,MA0095.1;0,MA0098.1;0,MA0100.1;0.0127793,MA0101.1;0.00478147,MA0103.1;0.595751,MA0105.1;0.00707324,MA0106.1;0.0693449,MA0107.1;0.00432093,MA0108.2;0.968046,MA0109.1;0,MA0111.1;0.287613,MA0113.1;0.915009,MA0114.1;0.0565166,MA0115.1;0.270612,MA0116.1;0.00336752,MA0117.1;0.0588096,MA0119.1;0.471183,MA0122.1;0.613181,MA0124.1;0.858904,MA0125.1;3.46376,MA0130.1;0,MA0131.1;0.000487246,MA0132.1;0,MA0133.1;0,MA0135.1;0.703851,MA0136.1;0.194913,MA0139.1;0.30217,MA0140.1;0.0118737,MA0141.1;0.597838,MA0142.1;4.34231,MA0143.1;3.40795,MA0144.1;0.111492,MA0145.1;0.0299517,MA0146.1;0,MA0147.1;0.0286905,MA0148.1;1.8731,MA0149.1;0.350888,MA0062.2;3.92291e-05,MA0035.2;0.0356886,MA0039.2;1.16299e-11,MA0138.2;0.0357242,MA0002.2;3.42554,MA0137.2;0.0231446,MA0104.2;0.0199749,MA0047.2;1.40409,MA0112.2;5.00115e-06,MA0065.2;0.032038,MA0150.1;0.000432912,MA0151.1;0,MA0152.1;0.793183,MA0153.1;0.200288,MA0154.1;0.000234961,MA0155.1;0.0183582,MA0156.1;0.0040014,MA0157.1;1.18986,MA0158.1;0,MA0159.1;0.651131,MA0160.1;0.380578,MA0161.1;0,MA0162.1;4.82164e-17,MA0163.1;1.12966e-12,MA0164.1;0.545064,MA0080.2;0.341032,MA0018.2;0.0240338,MA0099.2;0.197163,MA0079.2;0,MA0102.2;0.0713204,MA0258.1;0.000105672,MA0259.1;0.0299272,MA0442.1;0
}}
}}

Revision as of 18:07, 22 January 2013


Full id: C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon



Phase1 CAGE Peaks

Hg19::chr10:115999004..115999019,+p1@VWA2
Hg19::chr10:115999110..115999141,+p4@VWA2
Hg19::chr10:115999180..115999190,+p7@VWA2
Hg19::chr10:129703363..129703373,+p@chr10:129703363..129703373
+
Hg19::chr10:129703377..129703388,+p@chr10:129703377..129703388
+
Hg19::chr10:129703392..129703416,+p@chr10:129703392..129703416
+
Hg19::chr10:129703430..129703445,+p@chr10:129703430..129703445
+
Hg19::chr10:129704201..129704232,-p@chr10:129704201..129704232
-
Hg19::chr10:129704382..129704389,+p@chr10:129704382..129704389
+
Hg19::chr10:129704395..129704457,+p@chr10:129704395..129704457
+
Hg19::chr10:129704473..129704478,+p@chr10:129704473..129704478
+
Hg19::chr10:129704512..129704515,+p@chr10:129704512..129704515
+
Hg19::chr10:129704562..129704569,+p@chr10:129704562..129704569
+
Hg19::chr10:129704613..129704655,+p@chr10:129704613..129704655
+
Hg19::chr10:129710296..129710320,-p@chr10:129710296..129710320
-
Hg19::chr10:29212181..29212188,+p@chr10:29212181..29212188
+
Hg19::chr10:29213480..29213487,-p@chr10:29213480..29213487
-
Hg19::chr10:29213612..29213644,+p@chr10:29213612..29213644
+
Hg19::chr10:5077525..5077540,+p3@AKR1C3
Hg19::chr10:5530789..5530809,-p@chr10:5530789..5530809
-
Hg19::chr10:65730100..65730104,-p@chr10:65730100..65730104
-
Hg19::chr10:65821760..65821780,+p@chr10:65821760..65821780
+
Hg19::chr10:82723188..82723191,-p@chr10:82723188..82723191
-
Hg19::chr11:20362300..20362305,+p@chr11:20362300..20362305
+
Hg19::chr11:33890031..33890035,+p@chr11:33890031..33890035
+
Hg19::chr11:41519057..41519065,-p@chr11:41519057..41519065
-
Hg19::chr11:42142040..42142055,+p@chr11:42142040..42142055
+
Hg19::chr11:55029628..55029641,+p1@TRIM48
Hg19::chr11:61355815..61355827,-p@chr11:61355815..61355827
-
Hg19::chr11:69634097..69634102,-p7@FGF3
Hg19::chr11:69634129..69634145,-p3@FGF3
Hg19::chr11:69634149..69634169,-p2@FGF3
Hg19::chr11:69634178..69634189,-p4@FGF3
Hg19::chr11:69640098..69640109,+p@chr11:69640098..69640109
+
Hg19::chr11:69640117..69640124,+p@chr11:69640117..69640124
+
Hg19::chr11:69640133..69640140,+p@chr11:69640133..69640140
+
Hg19::chr11:69655881..69655893,+p@chr11:69655881..69655893
+
Hg19::chr11:69655969..69655978,+p@chr11:69655969..69655978
+
Hg19::chr11:7597752..7597757,+p38@PPFIBP2
Hg19::chr11:86502231..86502240,-p@chr11:86502231..86502240
-
Hg19::chr12:116156829..116156831,-p@chr12:116156829..116156831
-
Hg19::chr12:116200801..116200808,-p@chr12:116200801..116200808
-
Hg19::chr12:116200864..116200875,-p@chr12:116200864..116200875
-
Hg19::chr12:116200913..116200922,-p@chr12:116200913..116200922
-
Hg19::chr12:121131976..121131987,+p@chr12:121131976..121131987
+
Hg19::chr12:130617969..130617976,+p@chr12:130617969..130617976
+
Hg19::chr12:130618024..130618032,+p@chr12:130618024..130618032
+
Hg19::chr12:15722105..15722121,+p@chr12:15722105..15722121
+
Hg19::chr12:22688226..22688249,-p9@KIAA0528
Hg19::chr12:27398584..27398595,+p8@STK38L
Hg19::chr12:27925654..27925663,-p@chr12:27925654..27925663
-
Hg19::chr12:27932375..27932389,+p15@KLHDC5
Hg19::chr12:28126518..28126555,-p@chr12:28126518..28126555
-
Hg19::chr12:28182901..28182931,+p@chr12:28182901..28182931
+
Hg19::chr12:41186960..41186982,-p@chr12:41186960..41186982
-
Hg19::chr12:41194014..41194019,+p@chr12:41194014..41194019
+
Hg19::chr12:41194024..41194052,+p@chr12:41194024..41194052
+
Hg19::chr12:46057488..46057497,-p@chr12:46057488..46057497
-
Hg19::chr12:46121294..46121301,-p12@LOC400027
Hg19::chr12:46124826..46124840,+p@chr12:46124826..46124840
+
Hg19::chr12:46124855..46124858,+p@chr12:46124855..46124858
+
Hg19::chr12:54535470..54535475,+p@chr12:54535470..54535475
+
Hg19::chr12:55223769..55223774,+p@chr12:55223769..55223774
+
Hg19::chr12:55224450..55224471,+p2@MUCL1
Hg19::chr12:55224476..55224495,+p3@MUCL1
Hg19::chr12:55224505..55224522,+p5@MUCL1
Hg19::chr12:55224582..55224591,+p10@MUCL1
Hg19::chr12:65516484..65516493,-p@chr12:65516484..65516493
-
Hg19::chr12:79406792..79406813,+p@chr12:79406792..79406813
+
Hg19::chr12:79406817..79406825,+p@chr12:79406817..79406825
+
Hg19::chr12:79756320..79756329,-p@chr12:79756320..79756329
-
Hg19::chr12:79756349..79756364,-p@chr12:79756349..79756364
-
Hg19::chr12:79756373..79756391,-p@chr12:79756373..79756391
-
Hg19::chr12:79756403..79756414,-p@chr12:79756403..79756414
-
Hg19::chr12:84126726..84126727,-p@chr12:84126726..84126727
-
Hg19::chr12:84178253..84178258,-p@chr12:84178253..84178258
-
Hg19::chr12:84178276..84178289,-p@chr12:84178276..84178289
-
Hg19::chr12:84664596..84664600,+p@chr12:84664596..84664600
+
Hg19::chr12:84664662..84664670,+p3@ENST00000547882
Hg19::chr12:84664687..84664694,+p4@ENST00000547882
Hg19::chr12:84664700..84664710,+p1@ENST00000547882
Hg19::chr12:84664736..84664743,+p2@ENST00000547882
Hg19::chr12:89363179..89363191,+p@chr12:89363179..89363191
+
Hg19::chr13:101090885..101090903,+p@chr13:101090885..101090903
+
Hg19::chr13:101090921..101090936,+p@chr13:101090921..101090936
+
Hg19::chr13:31611296..31611303,-p@chr13:31611296..31611303
-
Hg19::chr14:25326297..25326305,-p@chr14:25326297..25326305
-
Hg19::chr14:25326318..25326332,-p@chr14:25326318..25326332
-
Hg19::chr14:56079234..56079242,+p10@AB527439
Hg19::chr14:57021818..57021822,+p@chr14:57021818..57021822
+
Hg19::chr14:59159939..59159979,+p@chr14:59159939..59159979
+
Hg19::chr14:89802911..89802924,-p@chr14:89802911..89802924
-
Hg19::chr14:89802926..89802934,-p@chr14:89802926..89802934
-
Hg19::chr15:101343295..101343307,-p@chr15:101343295..101343307
-
Hg19::chr15:71407352..71407363,+p@chr15:71407352..71407363
+
Hg19::chr15:71407437..71407448,+p@chr15:71407437..71407448
+
Hg19::chr15:71685918..71685922,-p@chr15:71685918..71685922
-
Hg19::chr15:89655898..89655913,+p@chr15:89655898..89655913
+
Hg19::chr15:89655929..89655934,+p@chr15:89655929..89655934
+
Hg19::chr15:89655990..89655997,+p@chr15:89655990..89655997
+
Hg19::chr15:89659336..89659344,+p33@ABHD2
Hg19::chr15:94841060..94841072,+p11@MCTP2
Hg19::chr16:50425471..50425482,+p@chr16:50425471..50425482
+
Hg19::chr16:50426225..50426231,-p@chr16:50426225..50426231
-
Hg19::chr16:50502335..50502357,+p@chr16:50502335..50502357
+
Hg19::chr16:50553120..50553126,-p@chr16:50553120..50553126
-
Hg19::chr16:50581615..50581631,+p@chr16:50581615..50581631
+
Hg19::chr16:50582928..50582933,+p@chr16:50582928..50582933
+
Hg19::chr16:50583018..50583026,+p@chr16:50583018..50583026
+
Hg19::chr16:50583050..50583076,+p@chr16:50583050..50583076
+
Hg19::chr16:66088105..66088108,-p@chr16:66088105..66088108
-
Hg19::chr17:19650264..19650287,-p@chr17:19650264..19650287
-
Hg19::chr17:19651598..19651620,-p1@ALDH3A1
Hg19::chr17:39093486..39093495,-p8@KRT23
Hg19::chr17:39093516..39093527,-p2@KRT23
Hg19::chr17:56494830..56494851,-p4@RNF43
Hg19::chr17:59657604..59657621,-p@chr17:59657604..59657621
-
Hg19::chr17:63528638..63528642,+p@chr17:63528638..63528642
+
Hg19::chr17:79952161..79952162,+p@chr17:79952161..79952162
+
Hg19::chr17:79952258..79952274,+p@chr17:79952258..79952274
+
Hg19::chr17:79952303..79952334,+p@chr17:79952303..79952334
+
Hg19::chr17:79952341..79952352,+p@chr17:79952341..79952352
+
Hg19::chr17:79952353..79952362,+p@chr17:79952353..79952362
+
Hg19::chr17:79970295..79970307,+p@chr17:79970295..79970307
+
Hg19::chr17:79970753..79970763,+p15@ASPSCR1
Hg19::chr17:79970912..79970922,+p12@ASPSCR1
Hg19::chr17:79970924..79970946,+p6@ASPSCR1
Hg19::chr17:79970951..79970966,+p8@ASPSCR1
Hg19::chr17:79973593..79973633,-p@chr17:79973593..79973633
-
Hg19::chr17:79973783..79973793,+p@chr17:79973783..79973793
+
Hg19::chr17:79973884..79973909,+p@chr17:79973884..79973909
+
Hg19::chr17:79973963..79973972,+p@chr17:79973963..79973972
+
Hg19::chr17:79974020..79974025,+p@chr17:79974020..79974025
+
Hg19::chr17:79974036..79974045,+p@chr17:79974036..79974045
+
Hg19::chr17:79974321..79974331,+p@chr17:79974321..79974331
+
Hg19::chr17:79974374..79974382,+p@chr17:79974374..79974382
+
Hg19::chr18:10085304..10085314,+p@chr18:10085304..10085314
+
Hg19::chr18:10085504..10085505,+p@chr18:10085504..10085505
+
Hg19::chr18:10085554..10085562,+p@chr18:10085554..10085562
+
Hg19::chr18:10085799..10085809,+p@chr18:10085799..10085809
+
Hg19::chr18:10085817..10085825,+p@chr18:10085817..10085825
+
Hg19::chr18:10454647..10454682,+p2@APCDD1
Hg19::chr18:10456269..10456275,-p@chr18:10456269..10456275
-
Hg19::chr18:28978481..28978484,-p@chr18:28978481..28978484
-
Hg19::chr18:37331745..37331763,-p@chr18:37331745..37331763
-
Hg19::chr18:37420947..37420953,+p@chr18:37420947..37420953
+
Hg19::chr18:37604001..37604006,+p@chr18:37604001..37604006
+
Hg19::chr18:39258990..39258996,-p@chr18:39258990..39258996
-
Hg19::chr18:39798771..39798780,-p@chr18:39798771..39798780
-
Hg19::chr18:53253112..53253124,-p51@TCF4
Hg19::chr18:53254728..53254740,-p79@TCF4
Hg19::chr18:53254750..53254764,-p58@TCF4
Hg19::chr1:144618112..144618116,+p4@NBPF8
Hg19::chr1:167237970..167237996,+p@chr1:167237970..167237996
+
Hg19::chr1:167238001..167238010,+p@chr1:167238001..167238010
+
Hg19::chr1:168756079..168756087,+p3@ENST00000420691
Hg19::chr1:168756151..168756165,+p2@ENST00000420691
Hg19::chr1:168756303..168756308,+p1@MGC4473
Hg19::chr1:181360121..181360133,+p@chr1:181360121..181360133
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Hg19::chr1:181360150..181360162,+p@chr1:181360150..181360162
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Hg19::chr1:181360250..181360259,+p@chr1:181360250..181360259
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Hg19::chr1:181360920..181360925,+p@chr1:181360920..181360925
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Hg19::chr1:181361950..181361956,+p@chr1:181361950..181361956
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Hg19::chr1:199134722..199134729,+p@chr1:199134722..199134729
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Hg19::chr1:203965897..203965916,+p@chr1:203965897..203965916
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Hg19::chr1:219599419..219599426,-p@chr1:219599419..219599426
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Hg19::chr20:56706333..56706346,-p@chr20:56706333..56706346
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Hg19::chr21:36599466..36599476,-p@chr21:36599466..36599476
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Hg19::chr21:38295313..38295326,-p@chr21:38295313..38295326
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Hg19::chr22:29317456..29317489,+p@chr22:29317456..29317489
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Hg19::chr2:103089678..103089689,+p3@SLC9A4
Hg19::chr2:103089726..103089734,+p5@SLC9A4
Hg19::chr2:103089739..103089749,+p4@SLC9A4
Hg19::chr2:103089756..103089768,+p2@SLC9A4
Hg19::chr2:103089782..103089791,+p1@SLC9A4
Hg19::chr2:103090137..103090178,+p6@SLC9A4
Hg19::chr2:103095396..103095398,+p@chr2:103095396..103095398
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Hg19::chr2:103235035..103235044,+p@chr2:103235035..103235044
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Hg19::chr2:103235120..103235130,+p@chr2:103235120..103235130
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Hg19::chr2:103235132..103235142,+p@chr2:103235132..103235142
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Hg19::chr2:103235211..103235247,+p@chr2:103235211..103235247
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Hg19::chr2:103235329..103235342,+p@chr2:103235329..103235342
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Hg19::chr2:103287330..103287331,+p@chr2:103287330..103287331
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Hg19::chr2:130564567..130564572,-p2@LOC100131048
Hg19::chr2:130564740..130564772,-p1@LOC100131048
Hg19::chr2:130568628..130568649,+p@chr2:130568628..130568649
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Hg19::chr2:135119411..135119428,+p@chr2:135119411..135119428
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Hg19::chr2:135119485..135119494,+p@chr2:135119485..135119494
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Hg19::chr2:135119504..135119516,+p@chr2:135119504..135119516
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Hg19::chr2:135119522..135119533,+p@chr2:135119522..135119533
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Hg19::chr2:135119540..135119551,+p@chr2:135119540..135119551
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Hg19::chr2:135119636..135119642,+p@chr2:135119636..135119642
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Hg19::chr2:135119852..135119864,+p@chr2:135119852..135119864
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Hg19::chr2:135119933..135119940,+p@chr2:135119933..135119940
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Hg19::chr2:135120480..135120481,+p@chr2:135120480..135120481
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Hg19::chr2:135169581..135169587,+p@chr2:135169581..135169587
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Hg19::chr2:135170027..135170035,+p@chr2:135170027..135170035
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Hg19::chr2:135170047..135170048,+p@chr2:135170047..135170048
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Hg19::chr2:135170076..135170085,+p@chr2:135170076..135170085
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Hg19::chr2:135170086..135170106,+p@chr2:135170086..135170106
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Hg19::chr2:175412075..175412078,+p3@uc002uix.1
Hg19::chr2:180427235..180427244,-p10@ZNF385B
Hg19::chr2:180427245..180427256,-p12@ZNF385B
Hg19::chr2:192805223..192805230,+p@chr2:192805223..192805230
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Hg19::chr2:192805239..192805246,+p@chr2:192805239..192805246
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Hg19::chr2:192805413..192805418,+p@chr2:192805413..192805418
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Hg19::chr2:192917090..192917101,+p@chr2:192917090..192917101
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Hg19::chr2:192917107..192917114,+p@chr2:192917107..192917114
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Hg19::chr2:204816181..204816219,-p@chr2:204816181..204816219
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Hg19::chr2:208001650..208001675,-p@chr2:208001650..208001675
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Hg19::chr2:208001698..208001735,-p@chr2:208001698..208001735
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Hg19::chr2:220553203..220553207,+p@chr2:220553203..220553207
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Hg19::chr2:220594691..220594695,+p4@ENST00000442416
Hg19::chr2:220594700..220594702,+p6@ENST00000442416
Hg19::chr2:220594710..220594720,+p3@ENST00000442416
Hg19::chr2:220594730..220594748,+p2@ENST00000442416
Hg19::chr2:220594842..220594867,+p1@ENST00000442416
Hg19::chr2:220607845..220607848,+p@chr2:220607845..220607848
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Hg19::chr2:220693368..220693372,+p@chr2:220693368..220693372
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Hg19::chr2:220695661..220695670,+p@chr2:220695661..220695670
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Hg19::chr2:220711797..220711801,+p@chr2:220711797..220711801
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Hg19::chr2:220718359..220718366,+p@chr2:220718359..220718366
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Hg19::chr2:220752016..220752022,+p@chr2:220752016..220752022
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Hg19::chr2:220896144..220896147,+p@chr2:220896144..220896147
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Hg19::chr2:222127471..222127478,-p@chr2:222127471..222127478
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Hg19::chr2:222160741..222160750,+p@chr2:222160741..222160750
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Hg19::chr2:222160756..222160761,+p@chr2:222160756..222160761
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Hg19::chr2:222160774..222160804,+p@chr2:222160774..222160804
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Hg19::chr2:235346955..235346968,+p1@ENST00000418025
Hg19::chr2:235346970..235346989,+p2@ENST00000418025
Hg19::chr2:23850222..23850227,+p@chr2:23850222..23850227
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Hg19::chr2:23850233..23850248,+p@chr2:23850233..23850248
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Hg19::chr2:240176859..240176904,-p@chr2:240176859..240176904
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Hg19::chr2:240197666..240197678,+p@chr2:240197666..240197678
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Hg19::chr2:240197686..240197709,+p@chr2:240197686..240197709
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Hg19::chr2:240197727..240197737,+p@chr2:240197727..240197737
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Hg19::chr2:240197771..240197776,+p@chr2:240197771..240197776
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Hg19::chr2:34673099..34673137,+p@chr2:34673099..34673137
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Hg19::chr2:91776712..91776739,+p@chr2:91776712..91776739
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Hg19::chr2:97625602..97625628,-p@chr2:97625602..97625628
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Hg19::chr2:97626013..97626024,+p@chr2:97626013..97626024
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Hg19::chr2:97626065..97626084,-p@chr2:97626065..97626084
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Hg19::chr2:97626140..97626165,-p@chr2:97626140..97626165
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Hg19::chr2:97626185..97626188,-p@chr2:97626185..97626188
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Hg19::chr2:97626238..97626265,-p@chr2:97626238..97626265
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Hg19::chr2:97626375..97626385,-p@chr2:97626375..97626385
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Hg19::chr2:97626442..97626445,-p@chr2:97626442..97626445
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Hg19::chr2:97626453..97626477,-p@chr2:97626453..97626477
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Hg19::chr2:97626499..97626505,-p@chr2:97626499..97626505
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Hg19::chr2:97626550..97626562,-p@chr2:97626550..97626562
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Hg19::chr2:97626580..97626585,-p@chr2:97626580..97626585
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Hg19::chr2:97626588..97626595,-p@chr2:97626588..97626595
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Hg19::chr2:97626600..97626606,-p@chr2:97626600..97626606
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Hg19::chr2:97626726..97626741,+p@chr2:97626726..97626741
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Hg19::chr2:97633674..97633677,+p@chr2:97633674..97633677
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Hg19::chr3:115898365..115898379,+p@chr3:115898365..115898379
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Hg19::chr3:150914094..150914095,+p@chr3:150914094..150914095
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Hg19::chr3:150914192..150914197,+p@chr3:150914192..150914197
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Hg19::chr3:150914241..150914244,+p@chr3:150914241..150914244
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Hg19::chr3:171781796..171781805,+p@chr3:171781796..171781805
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Hg19::chr3:186548894..186548902,+p@chr3:186548894..186548902
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Hg19::chr3:194808375..194808396,+p@chr3:194808375..194808396
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Hg19::chr3:57199333..57199352,-p2@IL17RD
Hg19::chr3:59032724..59032732,-p@chr3:59032724..59032732
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Hg19::chr3:86929211..86929219,+p@chr3:86929211..86929219
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Hg19::chr3:95401565..95401581,-p2@ENST00000463799
Hg19::chr3:95401649..95401655,-p3@ENST00000463799
Hg19::chr3:95401928..95401936,-p3@ENST00000494840
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Hg19::chr3:95401960..95401971,-p1@ENST00000494840
p1@uc003dro.1
Hg19::chr3:96150..96169,+p@chr3:96150..96169
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Hg19::chr4:107955476..107955508,-p@chr4:107955476..107955508
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Hg19::chr4:139012685..139012696,-p1@ENST00000505874
Hg19::chr4:139019174..139019198,-p@chr4:139019174..139019198
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Hg19::chr4:17372710..17372719,+p@chr4:17372710..17372719
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Hg19::chr4:37653629..37653673,-p@chr4:37653629..37653673
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Hg19::chr4:3838289..3838308,-p@chr4:3838289..3838308
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Hg19::chr4:39301903..39301910,-p@chr4:39301903..39301910
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Hg19::chr4:4204390..4204427,-p@chr4:4204390..4204427
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Hg19::chr4:4763533..4763544,+p1@uc003gie.1
Hg19::chr4:6324309..6324314,-p43@PPP2R2C
Hg19::chr4:6324488..6324500,-p12@PPP2R2C
Hg19::chr4:6324582..6324604,-p21@PPP2R2C
Hg19::chr4:6324609..6324619,-p24@PPP2R2C
Hg19::chr4:6324645..6324657,-p15@PPP2R2C
Hg19::chr4:81460545..81460547,-p@chr4:81460545..81460547
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Hg19::chr5:1004438..1004443,+p3@ENST00000502737
Hg19::chr5:1004822..1004837,+p2@ENST00000502737
Hg19::chr5:1049320..1049333,+p@chr5:1049320..1049333
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Hg19::chr5:134907210..134907215,-p@chr5:134907210..134907215
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Hg19::chr5:134914807..134914816,+p5@ENST00000514446
Hg19::chr5:134914843..134914871,+p1@ENST00000514446
Hg19::chr5:134914883..134914897,+p2@ENST00000514446
Hg19::chr5:134914909..134914920,+p4@ENST00000514446
Hg19::chr5:134914928..134914940,+p3@ENST00000514446
Hg19::chr5:134915254..134915270,-p3@CXCL14
Hg19::chr5:134920622..134920655,+p@chr5:134920622..134920655
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Hg19::chr5:146890082..146890106,-p26@DPYSL3
Hg19::chr5:146890197..146890224,-p@chr5:146890197..146890224
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Hg19::chr5:146890510..146890519,-p@chr5:146890510..146890519
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Hg19::chr5:146890526..146890548,-p@chr5:146890526..146890548
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Hg19::chr5:146890606..146890628,-p@chr5:146890606..146890628
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Hg19::chr5:146890655..146890661,-p@chr5:146890655..146890661
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Hg19::chr5:146890667..146890672,-p@chr5:146890667..146890672
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Hg19::chr5:146890870..146890882,-p@chr5:146890870..146890882
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Hg19::chr5:146890999..146891017,-p@chr5:146890999..146891017
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Hg19::chr5:167247466..167247490,+p@chr5:167247466..167247490
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Hg19::chr5:167247494..167247509,+p@chr5:167247494..167247509
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Hg19::chr5:167247511..167247528,+p@chr5:167247511..167247528
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Hg19::chr5:174148301..174148314,+p@chr5:174148301..174148314
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Hg19::chr5:174148333..174148344,+p@chr5:174148333..174148344
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Hg19::chr5:28571958..28571968,-p@chr5:28571958..28571968
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Hg19::chr5:28571974..28571978,-p@chr5:28571974..28571978
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Hg19::chr5:28572013..28572023,-p@chr5:28572013..28572023
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Hg19::chr5:33619040..33619056,-p@chr5:33619040..33619056
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Hg19::chr5:33619084..33619089,-p@chr5:33619084..33619089
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Hg19::chr5:33650078..33650111,-p@chr5:33650078..33650111
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Hg19::chr5:76673620..76673642,+p@chr5:76673620..76673642
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Hg19::chr6:125378772..125378777,+p@chr6:125378772..125378777
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Hg19::chr6:125379193..125379201,+p@chr6:125379193..125379201
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Hg19::chr6:125379216..125379226,+p@chr6:125379216..125379226
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Hg19::chr6:125379227..125379239,+p@chr6:125379227..125379239
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Hg19::chr6:125524852..125524861,+p7@TPD52L1
Hg19::chr6:125538717..125538734,+p@chr6:125538717..125538734
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Hg19::chr6:125538738..125538766,+p@chr6:125538738..125538766
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Hg19::chr6:125540724..125540736,+p12@TPD52L1
Hg19::chr6:125547084..125547089,+p@chr6:125547084..125547089
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Hg19::chr6:21668692..21668725,+p19@LINC00340
Hg19::chr6:23637626..23637637,-p@chr6:23637626..23637637
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Hg19::chr6:23637684..23637686,-p@chr6:23637684..23637686
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Hg19::chr6:23637697..23637700,-p@chr6:23637697..23637700
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Hg19::chr6:23637711..23637717,-p@chr6:23637711..23637717
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Hg19::chr6:31680315..31680332,+p@chr6:31680315..31680332
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Hg19::chr6:31681839..31681850,-p11@ABHD16A
p1@LY6G6E
Hg19::chr6:31681859..31681865,-p3@LY6G6E
Hg19::chr6:31681875..31681886,-p2@LY6G6E
Hg19::chr6:45398482..45398492,+p@chr6:45398482..45398492
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Hg19::chr6:45398505..45398508,+p@chr6:45398505..45398508
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Hg19::chr6:45399245..45399258,+p@chr6:45399245..45399258
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Hg19::chr6:45399263..45399274,+p@chr6:45399263..45399274
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Hg19::chr6:45399278..45399287,+p@chr6:45399278..45399287
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Hg19::chr6:45399294..45399301,+p@chr6:45399294..45399301
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Hg19::chr6:45399422..45399430,+p@chr6:45399422..45399430
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Hg19::chr6:45399439..45399491,+p@chr6:45399439..45399491
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Hg19::chr6:45399533..45399540,+p@chr6:45399533..45399540
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Hg19::chr6:45399559..45399571,+p@chr6:45399559..45399571
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Hg19::chr6:45399614..45399642,+p@chr6:45399614..45399642
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Hg19::chr6:45399687..45399695,+p@chr6:45399687..45399695
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Hg19::chr6:45399724..45399733,+p@chr6:45399724..45399733
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Hg19::chr6:45405332..45405343,+p@chr6:45405332..45405343
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Hg19::chr6:45405393..45405412,+p@chr6:45405393..45405412
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Hg19::chr6:45405439..45405467,+p@chr6:45405439..45405467
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Hg19::chr6:998859..998863,-p@chr6:998859..998863
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Hg19::chr6:998877..998891,-p@chr6:998877..998891
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Hg19::chr6:998897..998898,-p@chr6:998897..998898
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Hg19::chr7:120378721..120378730,-p@chr7:120378721..120378730
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Hg19::chr7:120378742..120378768,-p@chr7:120378742..120378768
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Hg19::chr7:120379758..120379765,+p@chr7:120379758..120379765
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Hg19::chr7:120381610..120381618,+p@chr7:120381610..120381618
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Hg19::chr7:120381624..120381637,+p@chr7:120381624..120381637
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Hg19::chr7:120381641..120381650,+p@chr7:120381641..120381650
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Hg19::chr7:120383546..120383560,+p@chr7:120383546..120383560
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Hg19::chr7:139960476..139960487,-p@chr7:139960476..139960487
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Hg19::chr7:21209872..21209910,+p@chr7:21209872..21209910
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Hg19::chr7:26482694..26482710,-p@chr7:26482694..26482710
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Hg19::chr7:26482715..26482738,-p@chr7:26482715..26482738
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Hg19::chr7:79765099..79765103,+p29@GNAI1
Hg19::chr7:79813406..79813433,+p@chr7:79813406..79813433
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Hg19::chr7:79817699..79817717,+p@chr7:79817699..79817717
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Hg19::chr7:79818490..79818497,+p@chr7:79818490..79818497
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Hg19::chr7:79839919..79839924,+p@chr7:79839919..79839924
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Hg19::chr7:79840117..79840122,+p@chr7:79840117..79840122
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Hg19::chr7:79840127..79840130,+p@chr7:79840127..79840130
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Hg19::chr7:79840276..79840283,+p@chr7:79840276..79840283
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Hg19::chr7:79840296..79840308,+p@chr7:79840296..79840308
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Hg19::chr7:79840323..79840338,+p@chr7:79840323..79840338
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Hg19::chr7:79840341..79840362,+p@chr7:79840341..79840362
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Hg19::chr7:90896795..90896804,+p@chr7:90896795..90896804
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Hg19::chr7:91509972..91509984,-p3@MTERF
Hg19::chr7:95705361..95705372,+p@chr7:95705361..95705372
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Hg19::chr7:95705388..95705453,+p@chr7:95705388..95705453
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Hg19::chr7:95705470..95705480,+p@chr7:95705470..95705480
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Hg19::chr7:95709688..95709699,+p@chr7:95709688..95709699
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Hg19::chr7:95766136..95766143,-p@chr7:95766136..95766143
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Hg19::chr7:95766200..95766209,-p@chr7:95766200..95766209
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Hg19::chr7:95775942..95775990,-p@chr7:95775942..95775990
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Hg19::chr7:95776211..95776254,-p@chr7:95776211..95776254
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Hg19::chr7:95776285..95776292,-p@chr7:95776285..95776292
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Hg19::chr7:95777624..95777637,+p@chr7:95777624..95777637
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Hg19::chr7:96656030..96656036,-p@chr7:96656030..96656036
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Hg19::chr8:100549773..100549807,-p@chr8:100549773..100549807
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Hg19::chr8:100549830..100549854,-p@chr8:100549830..100549854
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Hg19::chr8:121815551..121815563,-p@chr8:121815551..121815563
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Hg19::chr8:121815648..121815680,-p@chr8:121815648..121815680
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Hg19::chr8:121815999..121816003,-p@chr8:121815999..121816003
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Hg19::chr8:121823411..121823471,+p2@AK302130
Hg19::chr8:121825088..121825094,-p18@SNTB1
Hg19::chr8:38441495..38441504,+p@chr8:38441495..38441504
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Hg19::chr8:38441518..38441534,+p@chr8:38441518..38441534
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Hg19::chr8:38441548..38441559,+p@chr8:38441548..38441559
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Hg19::chr8:38441630..38441635,+p@chr8:38441630..38441635
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Hg19::chr8:38459926..38459928,+p@chr8:38459926..38459928
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Hg19::chr8:39970826..39970832,+p@chr8:39970826..39970832
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Hg19::chr8:39972301..39972319,+p1@ENST00000521257
Hg19::chr8:54464033..54464036,-p@chr8:54464033..54464036
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Hg19::chr8:57229005..57229034,-p@chr8:57229005..57229034
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Hg19::chr8:57229064..57229075,-p@chr8:57229064..57229075
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Hg19::chr8:57359975..57359992,-p@chr8:57359975..57359992
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Hg19::chr8:57360021..57360028,-p@chr8:57360021..57360028
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Hg19::chr8:57360032..57360038,-p@chr8:57360032..57360038
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Hg19::chr8:57360577..57360585,-p@chr8:57360577..57360585
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Hg19::chr8:57525544..57525580,+p@chr8:57525544..57525580
+
Hg19::chr8:57525935..57525942,+p@chr8:57525935..57525942
+
Hg19::chr8:57526601..57526612,+p@chr8:57526601..57526612
+
Hg19::chr8:63948915..63948924,-p@chr8:63948915..63948924
-
Hg19::chr8:63951318..63951334,-p2@GGH
Hg19::chr8:72938203..72938230,+p@chr8:72938203..72938230
+
Hg19::chr8:73794113..73794122,+p@chr8:73794113..73794122
+
Hg19::chr8:73794614..73794650,+p@chr8:73794614..73794650
+
Hg19::chr8:85893922..85893940,+p@chr8:85893922..85893940
+
Hg19::chr9:129234745..129234747,-p@chr9:129234745..129234747
-
Hg19::chr9:129283229..129283233,-p@chr9:129283229..129283233
-
Hg19::chr9:129291797..129291800,-p@chr9:129291797..129291800
-
Hg19::chr9:129296315..129296326,-p@chr9:129296315..129296326
-
Hg19::chr9:129296343..129296353,-p@chr9:129296343..129296353
-
Hg19::chr9:129296371..129296385,-p@chr9:129296371..129296385
-
Hg19::chr9:129296392..129296405,-p@chr9:129296392..129296405
-
Hg19::chr9:75509796..75509799,-p@chr9:75509796..75509799
-
Hg19::chr9:9763035..9763040,-p@chr9:9763035..9763040
-
Hg19::chr9:97856010..97856019,+p@chr9:97856010..97856019
+
Hg19::chrX:121759039..121759050,-p@chrX:121759039..121759050
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0004033aldo-keto reductase activity0.0130238168629013



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br>disease_data<br>

Uber Anatomy
Ontology termp-valuen
maxillary sinus2.55e-981
paranasal sinus2.55e-981
Disease
Ontology termp-valuen
paranasal sinus cancer2.55e-981
maxillary sinus cancer2.55e-981
lung small cell carcinoma5.56e-264
respiratory system cancer7.63e-2616
bronchus cancer1.65e-157
bronchogenic carcinoma1.65e-157
lung carcinoma2.19e-129
lung cancer5.55e-0815


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.10
MA0004.10.421532
MA0006.10.00351436
MA0007.10.250117
MA0009.13.08049
MA0014.13.47158e-15
MA0017.10.339713
MA0019.10.0252885
MA0024.10.267824
MA0025.10.418501
MA0027.10.834963
MA0028.10.000192682
MA0029.11.27531
MA0030.10.569594
MA0031.10.790245
MA0038.10.645874
MA0040.11.89483
MA0041.11.57927
MA0042.12.73941
MA0043.10.27126
MA0046.10.547657
MA0048.15.5514e-09
MA0050.10.00866295
MA0051.10.0160215
MA0052.10.0769421
MA0055.10.00197522
MA0056.10
MA0057.10.241822
MA0058.10.372062
MA0059.10.363442
MA0060.11.40599e-13
MA0061.10.260087
MA0063.10
MA0066.10.00921146
MA0067.10.0810922
MA0068.13.22041
MA0069.10.0750212
MA0070.11.42138
MA0071.10.24791
MA0072.10.48052
MA0073.14.68775e-09
MA0074.10.162927
MA0076.11.62484e-06
MA0077.11.07232
MA0078.12.47484
MA0081.10.298122
MA0083.10.173728
MA0084.10.46912
MA0087.11.10358
MA0088.10.020928
MA0089.10
MA0090.10.608928
MA0091.10.0569395
MA0092.10.240016
MA0093.10.47823
MA0095.10
MA0098.10
MA0100.10.0127793
MA0101.10.00478147
MA0103.10.595751
MA0105.10.00707324
MA0106.10.0693449
MA0107.10.00432093
MA0108.20.968046
MA0109.10
MA0111.10.287613
MA0113.10.915009
MA0114.10.0565166
MA0115.10.270612
MA0116.10.00336752
MA0117.10.0588096
MA0119.10.471183
MA0122.10.613181
MA0124.10.858904
MA0125.13.46376
MA0130.10
MA0131.10.000487246
MA0132.10
MA0133.10
MA0135.10.703851
MA0136.10.194913
MA0139.10.30217
MA0140.10.0118737
MA0141.10.597838
MA0142.14.34231
MA0143.13.40795
MA0144.10.111492
MA0145.10.0299517
MA0146.10
MA0147.10.0286905
MA0148.11.8731
MA0149.10.350888
MA0062.23.92291e-05
MA0035.20.0356886
MA0039.21.16299e-11
MA0138.20.0357242
MA0002.23.42554
MA0137.20.0231446
MA0104.20.0199749
MA0047.21.40409
MA0112.25.00115e-06
MA0065.20.032038
MA0150.10.000432912
MA0151.10
MA0152.10.793183
MA0153.10.200288
MA0154.10.000234961
MA0155.10.0183582
MA0156.10.0040014
MA0157.11.18986
MA0158.10
MA0159.10.651131
MA0160.10.380578
MA0161.10
MA0162.14.82164e-17
MA0163.11.12966e-12
MA0164.10.545064
MA0080.20.341032
MA0018.20.0240338
MA0099.20.197163
MA0079.20
MA0102.20.0713204
MA0258.10.000105672
MA0259.10.0299272
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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