FFCP PHASE1:Hg19::chr17:79826055..79826064,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=N | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=434bp_to_BC007630_5end | |association_with_transcript=434bp_to_BC007630_5end |
Revision as of 13:37, 8 July 2013
Short description: | p23@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 434bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p23@ARHGDIA |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.20e-08 | 5 |
fibrocyte | 1.92e-08 | 3 |
tendon cell | 1.92e-08 | 3 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 2.04e-13 | 7 |
epithelial tube open at both ends | 3.11e-10 | 59 |
blood vessel | 3.11e-10 | 59 |
blood vasculature | 3.11e-10 | 59 |
vascular cord | 3.11e-10 | 59 |
vessel | 2.57e-09 | 68 |
thoracic segment blood vessel | 1.20e-08 | 5 |
subclavian artery | 1.20e-08 | 5 |
dense regular connective tissue | 1.92e-08 | 3 |
tendon | 1.92e-08 | 3 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.53e-08 | 3 |
leiomyoma | 1.53e-08 | 3 |
Showing 1 to 2 of 2 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.