FFCP PHASE1:Hg19::chr10:113987347..113987377,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C29|description=CAGE_peak_at_chr10:113987347..113987377,-|id=chr10:113987347..113987377,-|ontology_enrichment_celltype=CL:0000136!1.52e-20!15;CL:0002334!1.38e-08!12;CL:0000181!9.99e-08!12;CL:0000417!9.99e-08!12;CL:0000668!9.99e-08!12;CL:0000414!9.99e-08!12;CL:0000412!9.99e-08!12;CL:0000182!9.99e-08!12;CL:0002521!7.75e-07!3|ontology_enrichment_celltype_v019=CL:0000136;2.87e-49;13!CL:0000182;6.04e-16;12!CL:0002521;1.52e-12;3!CL:0002615;3.05e-12;3!CL:0002580;6.93e-12;3!CL:0002617;6.21e-09;2!CL:0002334;1.17e-07;12|ontology_enrichment_celltype_v019_2=CL:0000136,3.64e-42,15;CL:0000182,5.25e-16,12;CL:0002521,1.49e-12,3;CL:0002615,4.94e-12,3;CL:0002580,5.33e-12,3;CL:0002617,6.73e-09,2;CL:0002334,1.02e-07,12|ontology_enrichment_development_v019=UBERON:0004161;5.42e-13;11!UBERON:0009497;7.00e-11;13!UBERON:0003104;6.49e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!6.52e-12!31;UBERON:0002330!6.52e-12!31;UBERON:0002072!1.37e-09!5;UBERON:0001013!1.50e-09!14;UBERON:0002107!7.08e-09!19;UBERON:0006925!7.08e-09!19;UBERON:0008836!7.08e-09!19;UBERON:0003688!3.68e-08!6;UBERON:0002358!3.68e-08!6;UBERON:0003684!3.68e-08!6;UBERON:0001178!3.68e-08!6;UBERON:0009497!2.24e-07!25;UBERON:0000015!2.24e-07!25;UBERON:0002423!2.24e-07!25;UBERON:0006235!2.24e-07!25;UBERON:0004161!2.24e-07!25;UBERON:0008835!2.53e-07!22;UBERON:0003894!2.53e-07!22;UBERON:0001044!3.21e-07!6;UBERON:0003293!3.21e-07!6;UBERON:0003294!3.21e-07!6;UBERON:0010047!3.21e-07!6;UBERON:0000167!3.21e-07!6;UBERON:0005057!6.64e-07!26;UBERON:0009854!6.74e-07!23;UBERON:0002190!7.75e-07!3|ontology_enrichment_uberon_v019=UBERON:0002107;6.36e-16;19!UBERON:0006925;6.36e-16;19!UBERON:0003688;6.89e-16;6!UBERON:0002358;6.89e-16;6!UBERON:0003684;6.89e-16;6!UBERON:0001178;6.89e-16;6!UBERON:0000310;1.78e-13;10!UBERON:0001013;1.36e-12;14!UBERON:0002190;1.52e-12;3!UBERON:0001443;3.44e-12;11!UBERON:0002423;1.12e-11;25!UBERON:0002365;9.28e-11;31!UBERON:0002330;9.28e-11;31!UBERON:0004457;1.69e-10;9!UBERON:0000042;1.69e-10;9!UBERON:0002368;1.05e-07;33!UBERON:0002072;1.08e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.74e-16,19;UBERON:0006925,5.74e-16,19;UBERON:0008836,5.74e-16,19;UBERON:0003688,9.34e-16,6;UBERON:0002358,9.34e-16,6;UBERON:0003684,9.34e-16,6;UBERON:0001178,9.34e-16,6;UBERON:0008835,1.51e-13,22;UBERON:0003894,1.51e-13,22;UBERON:0000310,1.62e-13,10;UBERON:0009854,6.98e-13,23;UBERON:0001013,9.22e-13,14;UBERON:0002190,1.49e-12,3;UBERON:0001443,3.15e-12,11;UBERON:0007499,1.04e-11,25;UBERON:0009497,1.04e-11,25;UBERON:0000015,1.04e-11,25;UBERON:0002423,1.04e-11,25;UBERON:0006235,1.04e-11,25;UBERON:0004161,1.04e-11,25;UBERON:0002365,3.02e-11,31;UBERON:0002330,3.02e-11,31;UBERON:0009856,3.41e-11,26;UBERON:0009569,2.54e-10,112;UBERON:0002417,7.90e-10,60;UBERON:0000916,7.90e-10,60;UBERON:0002368,7.10e-08,35;UBERON:0004457,9.86e-08,12;UBERON:0000042,9.86e-08,12;UBERON:0002072,1.07e-07,5|phase1_expression=3.08853244759946,3.63970890614671,2.25527046553554,1.0007329835313,5.81049422755474,1.74467704820074,2.53299878168311,3.79031924056099,4.44015567939725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,1.94653948121054,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,8.84544495009863,10.6342183202653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0,0,0,0,1.95441710576241,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.61642896765115,1.25342674267927,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,1.84154367945675,3.08726103876381,1.79394808957981,0,3.05622450172854,0,0.616838775210622,0.710246901252508,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0,0.137836572484531,1.18162269355101,0,0.0852266274161009,0,0.330569830721956,0,0.765676274967505,0,0,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,1.10273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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_at_chr10:113987347..113987377,- | |||
|id=chr10:113987347..113987377,- | |||
|ontology_enrichment_celltype=CL:0000136!1.52e-20!15;CL:0002334!1.38e-08!12;CL:0000181!9.99e-08!12;CL:0000417!9.99e-08!12;CL:0000668!9.99e-08!12;CL:0000414!9.99e-08!12;CL:0000412!9.99e-08!12;CL:0000182!9.99e-08!12;CL:0002521!7.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.87e-49;13!CL:0000182;6.04e-16;12!CL:0002521;1.52e-12;3!CL:0002615;3.05e-12;3!CL:0002580;6.93e-12;3!CL:0002617;6.21e-09;2!CL:0002334;1.17e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.64e-42,15;CL:0000182,5.25e-16,12;CL:0002521,1.49e-12,3;CL:0002615,4.94e-12,3;CL:0002580,5.33e-12,3;CL:0002617,6.73e-09,2;CL:0002334,1.02e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.42e-13;11!UBERON:0009497;7.00e-11;13!UBERON:0003104;6.49e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!6.52e-12!31;UBERON:0002330!6.52e-12!31;UBERON:0002072!1.37e-09!5;UBERON:0001013!1.50e-09!14;UBERON:0002107!7.08e-09!19;UBERON:0006925!7.08e-09!19;UBERON:0008836!7.08e-09!19;UBERON:0003688!3.68e-08!6;UBERON:0002358!3.68e-08!6;UBERON:0003684!3.68e-08!6;UBERON:0001178!3.68e-08!6;UBERON:0009497!2.24e-07!25;UBERON:0000015!2.24e-07!25;UBERON:0002423!2.24e-07!25;UBERON:0006235!2.24e-07!25;UBERON:0004161!2.24e-07!25;UBERON:0008835!2.53e-07!22;UBERON:0003894!2.53e-07!22;UBERON:0001044!3.21e-07!6;UBERON:0003293!3.21e-07!6;UBERON:0003294!3.21e-07!6;UBERON:0010047!3.21e-07!6;UBERON:0000167!3.21e-07!6;UBERON:0005057!6.64e-07!26;UBERON:0009854!6.74e-07!23;UBERON:0002190!7.75e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.36e-16;19!UBERON:0006925;6.36e-16;19!UBERON:0003688;6.89e-16;6!UBERON:0002358;6.89e-16;6!UBERON:0003684;6.89e-16;6!UBERON:0001178;6.89e-16;6!UBERON:0000310;1.78e-13;10!UBERON:0001013;1.36e-12;14!UBERON:0002190;1.52e-12;3!UBERON:0001443;3.44e-12;11!UBERON:0002423;1.12e-11;25!UBERON:0002365;9.28e-11;31!UBERON:0002330;9.28e-11;31!UBERON:0004457;1.69e-10;9!UBERON:0000042;1.69e-10;9!UBERON:0002368;1.05e-07;33!UBERON:0002072;1.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.74e-16,19;UBERON:0006925,5.74e-16,19;UBERON:0008836,5.74e-16,19;UBERON:0003688,9.34e-16,6;UBERON:0002358,9.34e-16,6;UBERON:0003684,9.34e-16,6;UBERON:0001178,9.34e-16,6;UBERON:0008835,1.51e-13,22;UBERON:0003894,1.51e-13,22;UBERON:0000310,1.62e-13,10;UBERON:0009854,6.98e-13,23;UBERON:0001013,9.22e-13,14;UBERON:0002190,1.49e-12,3;UBERON:0001443,3.15e-12,11;UBERON:0007499,1.04e-11,25;UBERON:0009497,1.04e-11,25;UBERON:0000015,1.04e-11,25;UBERON:0002423,1.04e-11,25;UBERON:0006235,1.04e-11,25;UBERON:0004161,1.04e-11,25;UBERON:0002365,3.02e-11,31;UBERON:0002330,3.02e-11,31;UBERON:0009856,3.41e-11,26;UBERON:0009569,2.54e-10,112;UBERON:0002417,7.90e-10,60;UBERON:0000916,7.90e-10,60;UBERON:0002368,7.10e-08,35;UBERON:0004457,9.86e-08,12;UBERON:0000042,9.86e-08,12;UBERON:0002072,1.07e-07,5 | |||
|phase1_expression=3.08853244759946,3.63970890614671,2.25527046553554,1.0007329835313,5.81049422755474,1.74467704820074,2.53299878168311,3.79031924056099,4.44015567939725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,1.94653948121054,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,8.84544495009863,10.6342183202653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0,0,0,0,1.95441710576241,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.61642896765115,1.25342674267927,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,1.84154367945675,3.08726103876381,1.79394808957981,0,3.05622450172854,0,0.616838775210622,0.710246901252508,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0,0.137836572484531,1.18162269355101,0,0.0852266274161009,0,0.330569830721956,0,0.765676274967505,0,0,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7206543417515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84083628503879,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1499940560871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98797195464504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993573058514948,0,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,1.44475294950759,0,0,0,0,0,1.11712960508902,1.60412296808179,0,0,0,0.223171457441873,0,0.720599767084807,0,12.0538268930052,14.1755276415606,15.3680079987542,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,6.88795498286987,5.30027555648885,0,0,0,0,0.320362237703084,0,0,0,0,0,0,23.9367833482569,24.0662298261792,24.2013005643135,25.2461925646549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.233713309847224,0,0,0,0,0,0,0.777186002913902,0,0,0,1.08684069813382,0,0,1.04349012362347,0.751288044986092,0,0,0.545545977607678,0.537052785212442,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.6828739083758,3.45629830907046,0,0,0.0852134047591577,0,0,0,2.8666168169323,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,1.52934403219035,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,1.33151354837103,1.00636896795513,0 | |||
|short_description=p@chr10:113987347..113987377,- | |||
}} |
Revision as of 11:46, 10 September 2013
Short description: | p@chr10:113987347..113987377, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:113987347..113987377, - |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.64e-42 | 15 |
hepatocyte | 5.25e-16 | 12 |
subcutaneous fat cell | 1.49e-12 | 3 |
adipocyte of omentum tissue | 4.94e-12 | 3 |
preadipocyte of the breast | 5.33e-12 | 3 |
adipocyte of breast | 6.73e-09 | 2 |
preadipocyte | 1.02e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.74e-16 | 19 |
digestive gland | 5.74e-16 | 19 |
liver bud | 5.74e-16 | 19 |
omentum | 9.34e-16 | 6 |
peritoneum | 9.34e-16 | 6 |
abdominal cavity | 9.34e-16 | 6 |
visceral peritoneum | 9.34e-16 | 6 |
hepatic diverticulum | 1.51e-13 | 22 |
liver primordium | 1.51e-13 | 22 |
breast | 1.62e-13 | 10 |
digestive tract diverticulum | 6.98e-13 | 23 |
adipose tissue | 9.22e-13 | 14 |
subcutaneous adipose tissue | 1.49e-12 | 3 |
chest | 3.15e-12 | 11 |
epithelial sac | 1.04e-11 | 25 |
epithelium of foregut-midgut junction | 1.04e-11 | 25 |
anatomical boundary | 1.04e-11 | 25 |
hepatobiliary system | 1.04e-11 | 25 |
foregut-midgut junction | 1.04e-11 | 25 |
septum transversum | 1.04e-11 | 25 |
exocrine gland | 3.02e-11 | 31 |
exocrine system | 3.02e-11 | 31 |
sac | 3.41e-11 | 26 |
subdivision of trunk | 2.54e-10 | 112 |
abdominal segment of trunk | 7.90e-10 | 60 |
abdomen | 7.90e-10 | 60 |
endocrine gland | 7.10e-08 | 35 |
cavity lining | 9.86e-08 | 12 |
serous membrane | 9.86e-08 | 12 |
hypodermis | 1.07e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.