FFCP PHASE1:Hg19::chr10:17258333..17258344,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C14|description=CAGE_peak_at_chr10:17258333..17258344,-|id=chr10:17258333..17258344,-|ontology_enrichment_celltype=CL:0000766!1.55e-28!76;CL:0002057!2.76e-26!42;CL:0000738!3.89e-26!140;CL:0000860!5.09e-24!45;CL:0000037!8.47e-23!172;CL:0000566!8.47e-23!172;CL:0000763!7.12e-22!112;CL:0000049!7.12e-22!112;CL:0000557!9.15e-22!71;CL:0000988!1.02e-20!182;CL:0000839!1.21e-20!70;CL:0002032!1.30e-19!165;CL:0000837!1.30e-19!165;CL:0002009!4.16e-18!65;CL:0002194!1.97e-17!63;CL:0000576!1.97e-17!63;CL:0000040!1.97e-17!63;CL:0000559!1.97e-17!63;CL:0002031!2.28e-17!124;CL:0002087!1.26e-16!119;CL:0000094!7.95e-10!8;CL:0000842!9.97e-08!3;CL:0000767!4.89e-07!3;CL:0000134!6.14e-07!358;CL:0000081!6.75e-07!11|ontology_enrichment_celltype_v019=CL:0000775;1.53e-15;3!CL:0000094;5.95e-13;8!CL:0000081;1.43e-09;11!CL:0000771;7.61e-07;2|ontology_enrichment_celltype_v019_2=CL:0000775,1.32e-15,3;CL:0000094,5.48e-13,8;CL:0000081,1.34e-09,11;CL:0000771,7.61e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.61e-33!102;UBERON:0003061!2.61e-33!102;UBERON:0002193!3.90e-29!112;UBERON:0000178!3.15e-21!15;UBERON:0000179!3.15e-21!15;UBERON:0000463!3.15e-21!15;UBERON:0002371!2.63e-18!80;UBERON:0001474!2.06e-16!86;UBERON:0004765!1.14e-13!101;UBERON:0001434!1.14e-13!101;UBERON:0002405!4.92e-13!115;UBERON:0003081!2.33e-10!216|ontology_enrichment_uberon_v019=UBERON:0000178;3.33e-73;15!UBERON:0000179;3.33e-73;15!UBERON:0000463;3.33e-73;15!UBERON:0002390;2.65e-31;32!UBERON:0002193;8.78e-18;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.18e-73,15;UBERON:0000179,4.18e-73,15;UBERON:0000463,4.18e-73,15;UBERON:0002390,1.58e-14,98;UBERON:0003061,1.58e-14,98;UBERON:0002193,4.88e-13,108;UBERON:0004535,5.79e-09,109;UBERON:0001009,1.10e-08,112;UBERON:0007023,6.93e-07,114|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0.768482119587302,0.236482229888585,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0.449446968890169,1.22433556948361,0,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,1.10483290796269,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,1.72425731986345,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.604820229674197,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0.576479813667846,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,1.49801404789436,0,2.48649308061621,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1489521846434,11.4695581071356,9.68400218196076,11.1968934465161,9.87269455406866,5.83625980073446,9.72056587028607,11.1037524681198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392125068635479,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563903507879121,0.322289439867886,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0.932388670104793,0,0,0,0,0,0,0,0,0.665756774185513,0,0|short_description=p@chr10:17258333..17258344,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr10:17258333..17258344,- | |||
|id=chr10:17258333..17258344,- | |||
|ontology_enrichment_celltype=CL:0000766!1.55e-28!76;CL:0002057!2.76e-26!42;CL:0000738!3.89e-26!140;CL:0000860!5.09e-24!45;CL:0000037!8.47e-23!172;CL:0000566!8.47e-23!172;CL:0000763!7.12e-22!112;CL:0000049!7.12e-22!112;CL:0000557!9.15e-22!71;CL:0000988!1.02e-20!182;CL:0000839!1.21e-20!70;CL:0002032!1.30e-19!165;CL:0000837!1.30e-19!165;CL:0002009!4.16e-18!65;CL:0002194!1.97e-17!63;CL:0000576!1.97e-17!63;CL:0000040!1.97e-17!63;CL:0000559!1.97e-17!63;CL:0002031!2.28e-17!124;CL:0002087!1.26e-16!119;CL:0000094!7.95e-10!8;CL:0000842!9.97e-08!3;CL:0000767!4.89e-07!3;CL:0000134!6.14e-07!358;CL:0000081!6.75e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.53e-15;3!CL:0000094;5.95e-13;8!CL:0000081;1.43e-09;11!CL:0000771;7.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.32e-15,3;CL:0000094,5.48e-13,8;CL:0000081,1.34e-09,11;CL:0000771,7.61e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.61e-33!102;UBERON:0003061!2.61e-33!102;UBERON:0002193!3.90e-29!112;UBERON:0000178!3.15e-21!15;UBERON:0000179!3.15e-21!15;UBERON:0000463!3.15e-21!15;UBERON:0002371!2.63e-18!80;UBERON:0001474!2.06e-16!86;UBERON:0004765!1.14e-13!101;UBERON:0001434!1.14e-13!101;UBERON:0002405!4.92e-13!115;UBERON:0003081!2.33e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.33e-73;15!UBERON:0000179;3.33e-73;15!UBERON:0000463;3.33e-73;15!UBERON:0002390;2.65e-31;32!UBERON:0002193;8.78e-18;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.18e-73,15;UBERON:0000179,4.18e-73,15;UBERON:0000463,4.18e-73,15;UBERON:0002390,1.58e-14,98;UBERON:0003061,1.58e-14,98;UBERON:0002193,4.88e-13,108;UBERON:0004535,5.79e-09,109;UBERON:0001009,1.10e-08,112;UBERON:0007023,6.93e-07,114 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0.768482119587302,0.236482229888585,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0.449446968890169,1.22433556948361,0,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,1.10483290796269,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,1.72425731986345,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.604820229674197,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0.576479813667846,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,1.49801404789436,0,2.48649308061621,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1489521846434,11.4695581071356,9.68400218196076,11.1968934465161,9.87269455406866,5.83625980073446,9.72056587028607,11.1037524681198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392125068635479,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563903507879121,0.322289439867886,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0.932388670104793,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr10:17258333..17258344,- | |||
}} |
Revision as of 12:40, 10 September 2013
Short description: | p@chr10:17258333..17258344, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:17258333..17258344, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.32e-15 | 3 |
granulocyte | 5.48e-13 | 8 |
blood cell | 1.34e-09 | 11 |
eosinophil | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.18e-73 | 15 |
haemolymphatic fluid | 4.18e-73 | 15 |
organism substance | 4.18e-73 | 15 |
hematopoietic system | 1.58e-14 | 98 |
blood island | 1.58e-14 | 98 |
hemolymphoid system | 4.88e-13 | 108 |
cardiovascular system | 5.79e-09 | 109 |
circulatory system | 1.10e-08 | 112 |
adult organism | 6.93e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.