FFCP PHASE1:Hg19::chr10:75568865..75568889,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8509|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7681|TSSclassifier=S|UniProt=|association_with_transcript=-31bp_to_ENST00000465929_5end|coexpression_cluster_id=C12|description=CAGE_peak_3_at_NDST2_5end|id=chr10:75568865..75568889,-|ontology_enrichment_celltype=CL:0002274!2.74e-21!5;CL:0000457!2.74e-21!5;CL:0002191!2.74e-21!5;CL:0000097!2.74e-21!5;CL:0000831!2.74e-21!5;CL:0002028!2.74e-21!5;CL:0000163!1.16e-11!9|ontology_enrichment_celltype_v019=CL:0000097;2.54e-99;5!CL:0000163;2.08e-55;9!CL:0000151;6.16e-13;36|ontology_enrichment_celltype_v019_2=CL:0000097,2.81e-99,5;CL:0002028,2.81e-99,5;CL:0000163,2.20e-55,9;CL:0000151,4.70e-14,36;CL:0000839,1.36e-07,66;CL:0000557,1.75e-07,67;CL:0000766,5.68e-07,72|ontology_enrichment_development_v019=UBERON:0006242;5.16e-21;1!UBERON:0009847;7.76e-08;3!UBERON:0003353;7.76e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.97e-21!115|ontology_enrichment_uberon_v019=UBERON:0007029;3.82e-21;1!UBERON:0006834;7.72e-21;1!UBERON:0002110;6.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.45e-21,1;UBERON:0006834,7.72e-21,1;UBERON:0002110,6.78e-08,3;UBERON:0006242,6.78e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,156.10987350545,176.436226325197,127.402038820594,118.541644987371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0.31396051279005,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.320362237703084,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33438257845874,0,0,0.913158720509496,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88568794447312,0,0,0,0,0,0,0.0771741581079447,0,0,1.71603825227734,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0.129177819672012,0,0,0,0,0.217716747896961,0.684466602170562,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,1.34465588601153,0,0.665756774185513,0,0|short_description=p3@NDST2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8509 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7681 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-31bp_to_ENST00000465929_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_NDST2_5end | |||
|id=chr10:75568865..75568889,- | |||
|ontology_enrichment_celltype=CL:0002274!2.74e-21!5;CL:0000457!2.74e-21!5;CL:0002191!2.74e-21!5;CL:0000097!2.74e-21!5;CL:0000831!2.74e-21!5;CL:0002028!2.74e-21!5;CL:0000163!1.16e-11!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.54e-99;5!CL:0000163;2.08e-55;9!CL:0000151;6.16e-13;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.81e-99,5;CL:0002028,2.81e-99,5;CL:0000163,2.20e-55,9;CL:0000151,4.70e-14,36;CL:0000839,1.36e-07,66;CL:0000557,1.75e-07,67;CL:0000766,5.68e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.16e-21;1!UBERON:0009847;7.76e-08;3!UBERON:0003353;7.76e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.97e-21!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;3.82e-21;1!UBERON:0006834;7.72e-21;1!UBERON:0002110;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.45e-21,1;UBERON:0006834,7.72e-21,1;UBERON:0002110,6.78e-08,3;UBERON:0006242,6.78e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,156.10987350545,176.436226325197,127.402038820594,118.541644987371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0.31396051279005,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.320362237703084,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33438257845874,0,0,0.913158720509496,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88568794447312,0,0,0,0,0,0,0.0771741581079447,0,0,1.71603825227734,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0.129177819672012,0,0,0,0,0.217716747896961,0.684466602170562,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,1.34465588601153,0,0.665756774185513,0,0 | |||
|short_description=p3@NDST2 | |||
}} |
Revision as of 14:23, 10 September 2013
Short description: | p3@NDST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NDST2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -31bp_to_ENST00000465929_5end |
EntrezGene: | NDST2 |
HGNC: | 7681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.81e-99 | 5 |
basophil mast progenitor cell | 2.81e-99 | 5 |
endocrine cell | 2.20e-55 | 9 |
secretory cell | 4.70e-14 | 36 |
myeloid lineage restricted progenitor cell | 1.36e-07 | 66 |
granulocyte monocyte progenitor cell | 1.75e-07 | 67 |
myeloid leukocyte | 5.68e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
surface | 3.45e-21 | 1 |
uterus or analog | 7.72e-21 | 1 |
gallbladder | 6.78e-08 | 3 |
gall bladder primordium | 6.78e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.