FFCP PHASE1:Hg19::chr11:2676900..2676903,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:2676900..2676903,-|id=chr11:2676900..2676903,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000123;4.66e-21;2!CL:0000242;4.66e-21;2!CL:0000312;2.97e-09;5!CL:0000240;6.33e-08;6!CL:0000311;6.33e-08;6!CL:0000079;6.33e-08;6!CL:0000237;6.33e-08;6!CL:0000039;5.70e-07;7!CL:0000586;5.70e-07;7|ontology_enrichment_celltype_v019_2=CL:0000242,3.11e-21,2;CL:0000312,2.53e-09,5;CL:0000240,5.54e-08,6;CL:0000311,5.54e-08,6;CL:0000079,5.54e-08,6;CL:0000237,5.54e-08,6;CL:0000036,5.54e-08,6;CL:0000357,5.54e-08,6;CL:0000114,5.54e-08,6;CL:0000039,5.70e-07,7;CL:0000586,5.70e-07,7|ontology_enrichment_development_v019=CL:0000357;6.33e-08;6!CL:0000114;6.33e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:178;1.48e-40;1!DOID:326;1.48e-40;1!DOID:3978;1.48e-40;1!DOID:3394;1.48e-40;1!DOID:5844;1.48e-40;1!DOID:114;4.66e-21;2!DOID:1287;3.10e-11;4!DOID:3095;3.15e-08;22!DOID:2994;3.15e-08;22|ontology_enrichment_disease_v019_2=DOID:178,9.91e-41,1;DOID:326,9.91e-41,1;DOID:3978,9.91e-41,1;DOID:3394,9.91e-41,1;DOID:5844,9.91e-41,1;DOID:114,3.81e-21,2;DOID:1287,2.80e-11,4;DOID:3095,3.27e-08,22;DOID:2994,3.27e-08,22|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002346;3.10e-11;4!UBERON:0000923;3.10e-11;4!UBERON:0010316;3.10e-11;4!UBERON:0005291;3.10e-11;4!UBERON:0002050;2.97e-09;5!UBERON:0005423;2.97e-09;5!UBERON:0001871;5.70e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001871,6.39e-07,6|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0,0,0.506328996723799,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.322260734604821,0.435050081742686,0.0852266274161009,0.178064071293475,0.330569830721956,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0.211673582723883,0.324621940274555,0,0.684704037099577,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.37428108081644,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,1.34636466614658,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0,0,0.37950746544837,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0.176512253383001,0,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,0.514784993585894,0,0.124252535565433,0.235694034616795,0.271808412147228,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0,0.687481272035051,0.717873024576814,1.39775300349294,0,0,0,0.360299883542404,0,0.630265458457789,0.494495150286999,0.337017719270924,0.295282444544246,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.1251909307065,0.573409195690071,0.332787154610557,0.0620964029413835,0,0.124980407962107,0.151649117541648,0.285465333544967,0,1.87333962322753,0.28984205722165,0,0.233713309847224,0.554805861502613,0,0.251567901752575,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0.463044948647668,0.244736704506468,0,0.617602894321944,0.438568099157414,0.176689145945881,0.38582807654183,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.218419276384028,0.509197589862076,1.2754495206101,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0.20170506870352,0,0.523813388962845,0,0,0.0675375846183947,0.781078098613847,0,0,0.546974809018219,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.271878931907327,0,0,0.111231401892069,0,0,0.280272163313789,0,0.431855182437243,0.47775168788705,0.0714765441766563,0.632054446930906,0.23248285073625,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0.559277158988962,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.473314686579554,0,0.436350690340377,0.5290268405154,0,0,0,0,0.327796715891087,0.380095503034311,0,0,0.18378979906969,0.50141507858475,0,0,0.829169439458779,0.413731983447581,0.426467963801962,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0,0|short_description=p@chr11:2676900..2676903,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:2676900..2676903,- | |||
|id=chr11:2676900..2676903,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.66e-21;2!CL:0000242;4.66e-21;2!CL:0000312;2.97e-09;5!CL:0000240;6.33e-08;6!CL:0000311;6.33e-08;6!CL:0000079;6.33e-08;6!CL:0000237;6.33e-08;6!CL:0000039;5.70e-07;7!CL:0000586;5.70e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.11e-21,2;CL:0000312,2.53e-09,5;CL:0000240,5.54e-08,6;CL:0000311,5.54e-08,6;CL:0000079,5.54e-08,6;CL:0000237,5.54e-08,6;CL:0000036,5.54e-08,6;CL:0000357,5.54e-08,6;CL:0000114,5.54e-08,6;CL:0000039,5.70e-07,7;CL:0000586,5.70e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000357;6.33e-08;6!CL:0000114;6.33e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;1.48e-40;1!DOID:326;1.48e-40;1!DOID:3978;1.48e-40;1!DOID:3394;1.48e-40;1!DOID:5844;1.48e-40;1!DOID:114;4.66e-21;2!DOID:1287;3.10e-11;4!DOID:3095;3.15e-08;22!DOID:2994;3.15e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:178,9.91e-41,1;DOID:326,9.91e-41,1;DOID:3978,9.91e-41,1;DOID:3394,9.91e-41,1;DOID:5844,9.91e-41,1;DOID:114,3.81e-21,2;DOID:1287,2.80e-11,4;DOID:3095,3.27e-08,22;DOID:2994,3.27e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.10e-11;4!UBERON:0000923;3.10e-11;4!UBERON:0010316;3.10e-11;4!UBERON:0005291;3.10e-11;4!UBERON:0002050;2.97e-09;5!UBERON:0005423;2.97e-09;5!UBERON:0001871;5.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,6.39e-07,6 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0,0,0.506328996723799,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.322260734604821,0.435050081742686,0.0852266274161009,0.178064071293475,0.330569830721956,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0.211673582723883,0.324621940274555,0,0.684704037099577,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.37428108081644,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,1.34636466614658,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0,0,0.37950746544837,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0.176512253383001,0,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,0.514784993585894,0,0.124252535565433,0.235694034616795,0.271808412147228,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0,0.687481272035051,0.717873024576814,1.39775300349294,0,0,0,0.360299883542404,0,0.630265458457789,0.494495150286999,0.337017719270924,0.295282444544246,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.1251909307065,0.573409195690071,0.332787154610557,0.0620964029413835,0,0.124980407962107,0.151649117541648,0.285465333544967,0,1.87333962322753,0.28984205722165,0,0.233713309847224,0.554805861502613,0,0.251567901752575,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0.463044948647668,0.244736704506468,0,0.617602894321944,0.438568099157414,0.176689145945881,0.38582807654183,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.218419276384028,0.509197589862076,1.2754495206101,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0.20170506870352,0,0.523813388962845,0,0,0.0675375846183947,0.781078098613847,0,0,0.546974809018219,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.271878931907327,0,0,0.111231401892069,0,0,0.280272163313789,0,0.431855182437243,0.47775168788705,0.0714765441766563,0.632054446930906,0.23248285073625,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0.559277158988962,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.473314686579554,0,0.436350690340377,0.5290268405154,0,0,0,0,0.327796715891087,0.380095503034311,0,0,0.18378979906969,0.50141507858475,0,0,0.829169439458779,0.413731983447581,0.426467963801962,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr11:2676900..2676903,- | |||
}} |
Revision as of 17:19, 10 September 2013
Short description: | p@chr11:2676900..2676903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:2676900..2676903, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.11e-21 | 2 |
keratinocyte | 2.53e-09 | 5 |
stratified squamous epithelial cell | 5.54e-08 | 6 |
keratin accumulating cell | 5.54e-08 | 6 |
stratified epithelial cell | 5.54e-08 | 6 |
keratinizing barrier epithelial cell | 5.54e-08 | 6 |
epithelial fate stem cell | 5.54e-08 | 6 |
stratified epithelial stem cell | 5.54e-08 | 6 |
surface ectodermal cell | 5.54e-08 | 6 |
germ line cell | 5.70e-07 | 7 |
germ cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 6.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 9.91e-41 | 1 |
ischemia | 9.91e-41 | 1 |
extrinsic cardiomyopathy | 9.91e-41 | 1 |
myocardial ischemia | 9.91e-41 | 1 |
myocardial infarction | 9.91e-41 | 1 |
heart disease | 3.81e-21 | 2 |
cardiovascular system disease | 2.80e-11 | 4 |
germ cell and embryonal cancer | 3.27e-08 | 22 |
germ cell cancer | 3.27e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.