FFCP PHASE1:Hg19::chr11:58869930..58869933,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C78|description=CAGE_peak_at_chr11:58869930..58869933,-|id=chr11:58869930..58869933,-|ontology_enrichment_celltype=CL:0000236!2.66e-71!14;CL:0000945!1.02e-61!24;CL:0000826!1.02e-61!24;CL:0000838!1.17e-26!52;CL:0000542!4.32e-26!53;CL:0000051!4.32e-26!53;CL:0002087!7.61e-16!119;CL:0002031!4.92e-15!124;CL:0000738!7.43e-13!140;CL:0000785!8.03e-13!2;CL:0000955!8.03e-13!2;CL:0000818!8.03e-13!2;CL:0000954!8.03e-13!2;CL:0000816!8.03e-13!2;CL:0000037!6.86e-11!172;CL:0000566!6.86e-11!172;CL:0002032!2.78e-10!165;CL:0000837!2.78e-10!165;CL:0000988!4.68e-10!182;CL:0000817!7.72e-09!3;CL:0000819!1.44e-07!1;CL:0000946!6.20e-07!1;CL:0000786!6.20e-07!1;CL:0000980!6.20e-07!1;CL:0000313!6.57e-07!1|ontology_enrichment_celltype_v019=CL:0000236;2.92e-154;13!CL:0000945;5.60e-98;24!CL:0000542;2.75e-34;53!CL:0000785;1.34e-15;1!CL:0000819;1.34e-15;1!CL:0002087;2.93e-08;104|ontology_enrichment_celltype_v019_2=CL:0000236,3.42e-143,14;CL:0000945,5.60e-98,24;CL:0000826,5.60e-98,24;CL:0000838,1.03e-44,52;CL:0000542,7.54e-44,53;CL:0000051,7.54e-44,53;CL:0002087,2.05e-19,115;CL:0002031,1.46e-18,120;CL:0000738,3.02e-16,136;CL:0000819,1.34e-15,1;CL:0002032,1.55e-13,161;CL:0000837,1.55e-13,161;CL:0000037,6.38e-13,168;CL:0000988,3.36e-12,177;CL:0000785,1.86e-08,2;CL:0000955,1.86e-08,2;CL:0000818,1.86e-08,2;CL:0000954,1.86e-08,2;CL:0000816,1.86e-08,2|ontology_enrichment_development_v019=CL:0000051;2.75e-34;53!CL:0000954;1.86e-08;2|ontology_enrichment_disease=DOID:0060058!5.56e-10!10;DOID:0060073!1.44e-07!1;DOID:8675!1.44e-07!1;DOID:2152!6.57e-07!1|ontology_enrichment_disease_v019=DOID:0060073;1.34e-15;1!DOID:8675;1.34e-15;1!DOID:0060058;1.67e-13;10|ontology_enrichment_disease_v019_2=DOID:0060073,1.34e-15,1;DOID:8675,1.34e-15,1;DOID:0060058,1.67e-13,10|ontology_enrichment_uberon=UBERON:0002106!6.10e-18!3;UBERON:0004854!6.10e-18!3;UBERON:0009034!6.10e-18!3;UBERON:0002095!6.10e-18!3;UBERON:0004782!6.10e-18!3;UBERON:0003281!6.10e-18!3;UBERON:0009664!6.10e-18!3;UBERON:0002296!6.10e-18!3;UBERON:0005602!6.10e-18!3;UBERON:0001179!6.10e-18!3;UBERON:0006293!6.10e-18!3;UBERON:0000178!1.38e-13!15;UBERON:0000179!1.38e-13!15;UBERON:0000463!1.38e-13!15;UBERON:0004177!2.76e-13!7;UBERON:0002372!3.02e-07!1;UBERON:0001961!3.02e-07!1;UBERON:0001744!3.02e-07!1;UBERON:0001735!3.02e-07!1;UBERON:0002193!3.11e-07!112;UBERON:0001154!3.85e-07!1;UBERON:0001153!3.85e-07!1;UBERON:0000945!4.86e-07!8;UBERON:0010039!4.86e-07!8;UBERON:0002390!6.11e-07!102;UBERON:0003061!6.11e-07!102;UBERON:0004911!6.57e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,8.7382177801941,4.44754626931777,1.28019066769952,7.60752375368424,5.74752439954483,9.25462821898807,12.4026988089597,2.27685187643779,2.34894875748376,1.52909291250092,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.714695326373367,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38591762254831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8648458162723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,3.0981758336728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr11:58869930..58869933,- | |||
|id=chr11:58869930..58869933,- | |||
|ontology_enrichment_celltype=CL:0000236!2.66e-71!14;CL:0000945!1.02e-61!24;CL:0000826!1.02e-61!24;CL:0000838!1.17e-26!52;CL:0000542!4.32e-26!53;CL:0000051!4.32e-26!53;CL:0002087!7.61e-16!119;CL:0002031!4.92e-15!124;CL:0000738!7.43e-13!140;CL:0000785!8.03e-13!2;CL:0000955!8.03e-13!2;CL:0000818!8.03e-13!2;CL:0000954!8.03e-13!2;CL:0000816!8.03e-13!2;CL:0000037!6.86e-11!172;CL:0000566!6.86e-11!172;CL:0002032!2.78e-10!165;CL:0000837!2.78e-10!165;CL:0000988!4.68e-10!182;CL:0000817!7.72e-09!3;CL:0000819!1.44e-07!1;CL:0000946!6.20e-07!1;CL:0000786!6.20e-07!1;CL:0000980!6.20e-07!1;CL:0000313!6.57e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.92e-154;13!CL:0000945;5.60e-98;24!CL:0000542;2.75e-34;53!CL:0000785;1.34e-15;1!CL:0000819;1.34e-15;1!CL:0002087;2.93e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.42e-143,14;CL:0000945,5.60e-98,24;CL:0000826,5.60e-98,24;CL:0000838,1.03e-44,52;CL:0000542,7.54e-44,53;CL:0000051,7.54e-44,53;CL:0002087,2.05e-19,115;CL:0002031,1.46e-18,120;CL:0000738,3.02e-16,136;CL:0000819,1.34e-15,1;CL:0002032,1.55e-13,161;CL:0000837,1.55e-13,161;CL:0000037,6.38e-13,168;CL:0000988,3.36e-12,177;CL:0000785,1.86e-08,2;CL:0000955,1.86e-08,2;CL:0000818,1.86e-08,2;CL:0000954,1.86e-08,2;CL:0000816,1.86e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.75e-34;53!CL:0000954;1.86e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!5.56e-10!10;DOID:0060073!1.44e-07!1;DOID:8675!1.44e-07!1;DOID:2152!6.57e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.34e-15;1!DOID:8675;1.34e-15;1!DOID:0060058;1.67e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.34e-15,1;DOID:8675,1.34e-15,1;DOID:0060058,1.67e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!6.10e-18!3;UBERON:0004854!6.10e-18!3;UBERON:0009034!6.10e-18!3;UBERON:0002095!6.10e-18!3;UBERON:0004782!6.10e-18!3;UBERON:0003281!6.10e-18!3;UBERON:0009664!6.10e-18!3;UBERON:0002296!6.10e-18!3;UBERON:0005602!6.10e-18!3;UBERON:0001179!6.10e-18!3;UBERON:0006293!6.10e-18!3;UBERON:0000178!1.38e-13!15;UBERON:0000179!1.38e-13!15;UBERON:0000463!1.38e-13!15;UBERON:0004177!2.76e-13!7;UBERON:0002372!3.02e-07!1;UBERON:0001961!3.02e-07!1;UBERON:0001744!3.02e-07!1;UBERON:0001735!3.02e-07!1;UBERON:0002193!3.11e-07!112;UBERON:0001154!3.85e-07!1;UBERON:0001153!3.85e-07!1;UBERON:0000945!4.86e-07!8;UBERON:0010039!4.86e-07!8;UBERON:0002390!6.11e-07!102;UBERON:0003061!6.11e-07!102;UBERON:0004911!6.57e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,8.7382177801941,4.44754626931777,1.28019066769952,7.60752375368424,5.74752439954483,9.25462821898807,12.4026988089597,2.27685187643779,2.34894875748376,1.52909291250092,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.714695326373367,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38591762254831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8648458162723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,3.0981758336728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:58869930..58869933,- | |||
}} |
Revision as of 18:14, 10 September 2013
Short description: | p@chr11:58869930..58869933, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58869930..58869933, - |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.42e-143 | 14 |
lymphocyte of B lineage | 5.60e-98 | 24 |
pro-B cell | 5.60e-98 | 24 |
lymphoid lineage restricted progenitor cell | 1.03e-44 | 52 |
lymphocyte | 7.54e-44 | 53 |
common lymphoid progenitor | 7.54e-44 | 53 |
nongranular leukocyte | 2.05e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.46e-18 | 120 |
leukocyte | 3.02e-16 | 136 |
B-1 B cell | 1.34e-15 | 1 |
hematopoietic oligopotent progenitor cell | 1.55e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-13 | 161 |
hematopoietic stem cell | 6.38e-13 | 168 |
hematopoietic cell | 3.36e-12 | 177 |
mature B cell | 1.86e-08 | 2 |
pre-B-II cell | 1.86e-08 | 2 |
transitional stage B cell | 1.86e-08 | 2 |
small pre-B-II cell | 1.86e-08 | 2 |
immature B cell | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.34e-15 | 1 |
lymphosarcoma | 1.34e-15 | 1 |
lymphoma | 1.67e-13 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.