FFCP PHASE1:Hg19::chr11:7595176..7595189,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8495|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9250|TSSclassifier=S|UniProt=E9PIK8|association_with_transcript=40bp_to_ENST00000529575_5end|coexpression_cluster_id=C1004|description=CAGE_peak_19_at_PPFIBP2_5end|id=chr11:7595176..7595189,+|ontology_enrichment_celltype=CL:0000039!5.28e-11!7;CL:0000586!5.28e-11!7;CL:0002541!1.51e-10!3;CL:0002150!1.28e-09!3;CL:0000861!1.28e-09!3;CL:0000083!4.92e-07!4|ontology_enrichment_celltype_v019=CL:0002541;1.71e-40;3!CL:0000039;1.07e-17;7!CL:0000586;1.07e-17;7!CL:0002563;1.51e-14;4!CL:0002253;3.69e-08;2!CL:1000415;4.53e-08;2!CL:0002097;6.36e-08;2!CL:0000349;6.63e-07;19|ontology_enrichment_celltype_v019_2=CL:0002541,1.71e-40,3;CL:0000039,8.30e-18,7;CL:0000586,8.30e-18,7;CL:0002563,1.61e-14,4;CL:0002253,3.56e-08,2;CL:1000415,4.38e-08,2;CL:0002097,7.03e-08,2;CL:0000349,6.63e-07,19|ontology_enrichment_development_v019=UBERON:0003124;2.75e-14;1|ontology_enrichment_disease=DOID:305!2.90e-14!106;DOID:0050687!9.82e-12!143;DOID:170!4.31e-08!6;DOID:1793!4.92e-07!4|ontology_enrichment_disease_v019=DOID:1799;1.50e-14;1!DOID:10165;1.50e-14;1!DOID:1798;1.50e-14;1!DOID:170;9.26e-10;6|ontology_enrichment_disease_v019_2=DOID:1799,2.11e-14,1;DOID:10165,2.11e-14,1;DOID:1798,2.11e-14,1;DOID:170,1.10e-09,6|ontology_enrichment_uberon=UBERON:0000476!1.51e-10!3;UBERON:0000920!1.51e-10!3;UBERON:0003929!6.58e-09!54;UBERON:0003124!1.31e-07!7;UBERON:0004921!1.59e-07!129;UBERON:0004185!1.59e-07!129;UBERON:0005631!1.73e-07!14;UBERON:0000158!1.73e-07!14;UBERON:0001007!2.31e-07!155;UBERON:0001555!2.31e-07!155;UBERON:0007026!2.31e-07!155;UBERON:0004119!6.05e-07!169;UBERON:0000925!6.05e-07!169;UBERON:0006595!6.05e-07!169;UBERON:0000949!6.81e-07!45;UBERON:0000160!7.57e-07!27|ontology_enrichment_uberon_v019=UBERON:0003124;1.71e-40;3!UBERON:0000920;1.71e-40;3!UBERON:0001242;1.51e-14;4!UBERON:0001262;1.51e-14;4!UBERON:0004786;1.51e-14;4!UBERON:0004808;1.51e-14;4!UBERON:0001277;1.51e-14;4!UBERON:0005631;1.22e-12;10!UBERON:0000158;1.22e-12;10!UBERON:0000478;4.12e-09;24!UBERON:0000485;1.05e-08;7!UBERON:0003929;1.05e-08;7!UBERON:0003350;1.00e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.71e-40,3;UBERON:0003124,1.93e-30,7;UBERON:0005631,2.06e-15,14;UBERON:0000158,2.06e-15,14;UBERON:0001242,1.61e-14,4;UBERON:0001262,1.61e-14,4;UBERON:0004786,1.61e-14,4;UBERON:0004808,1.61e-14,4;UBERON:0001277,1.61e-14,4;UBERON:0000478,4.20e-09,24;UBERON:0003350,1.04e-07,8;UBERON:0004923,5.78e-07,66;UBERON:0000485,6.04e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.721287081534056,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53620294826866,3.59030577639089,2.7161842980502,3.19001159731919,1.74035427463538,4.26427820814908,0,0,0,0,0,0,0,0,0,0.326465616318295,4.66465135732005,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.438535902517113,0.410577285266046,0,0,0,0,0,0,3.32437350649165,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.824158583811665,0.741438982396034,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,2.65013777824443,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,2.09525355585138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0.380095503034311,0.101988829741982,0,0.827054095813604,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0|short_description=p19@PPFIBP2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |||
|TSSclassifier=S | |||
|UniProt=E9PIK8 | |||
|association_with_transcript=40bp_to_ENST00000529575_5end | |||
|coexpression_cluster_id=C1004 | |||
|description=CAGE_peak_19_at_PPFIBP2_5end | |||
|id=chr11:7595176..7595189,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.28e-11!7;CL:0000586!5.28e-11!7;CL:0002541!1.51e-10!3;CL:0002150!1.28e-09!3;CL:0000861!1.28e-09!3;CL:0000083!4.92e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.71e-40;3!CL:0000039;1.07e-17;7!CL:0000586;1.07e-17;7!CL:0002563;1.51e-14;4!CL:0002253;3.69e-08;2!CL:1000415;4.53e-08;2!CL:0002097;6.36e-08;2!CL:0000349;6.63e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.71e-40,3;CL:0000039,8.30e-18,7;CL:0000586,8.30e-18,7;CL:0002563,1.61e-14,4;CL:0002253,3.56e-08,2;CL:1000415,4.38e-08,2;CL:0002097,7.03e-08,2;CL:0000349,6.63e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.75e-14;1 | |||
|ontology_enrichment_disease=DOID:305!2.90e-14!106;DOID:0050687!9.82e-12!143;DOID:170!4.31e-08!6;DOID:1793!4.92e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.50e-14;1!DOID:10165;1.50e-14;1!DOID:1798;1.50e-14;1!DOID:170;9.26e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.11e-14,1;DOID:10165,2.11e-14,1;DOID:1798,2.11e-14,1;DOID:170,1.10e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.51e-10!3;UBERON:0000920!1.51e-10!3;UBERON:0003929!6.58e-09!54;UBERON:0003124!1.31e-07!7;UBERON:0004921!1.59e-07!129;UBERON:0004185!1.59e-07!129;UBERON:0005631!1.73e-07!14;UBERON:0000158!1.73e-07!14;UBERON:0001007!2.31e-07!155;UBERON:0001555!2.31e-07!155;UBERON:0007026!2.31e-07!155;UBERON:0004119!6.05e-07!169;UBERON:0000925!6.05e-07!169;UBERON:0006595!6.05e-07!169;UBERON:0000949!6.81e-07!45;UBERON:0000160!7.57e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.71e-40;3!UBERON:0000920;1.71e-40;3!UBERON:0001242;1.51e-14;4!UBERON:0001262;1.51e-14;4!UBERON:0004786;1.51e-14;4!UBERON:0004808;1.51e-14;4!UBERON:0001277;1.51e-14;4!UBERON:0005631;1.22e-12;10!UBERON:0000158;1.22e-12;10!UBERON:0000478;4.12e-09;24!UBERON:0000485;1.05e-08;7!UBERON:0003929;1.05e-08;7!UBERON:0003350;1.00e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.71e-40,3;UBERON:0003124,1.93e-30,7;UBERON:0005631,2.06e-15,14;UBERON:0000158,2.06e-15,14;UBERON:0001242,1.61e-14,4;UBERON:0001262,1.61e-14,4;UBERON:0004786,1.61e-14,4;UBERON:0004808,1.61e-14,4;UBERON:0001277,1.61e-14,4;UBERON:0000478,4.20e-09,24;UBERON:0003350,1.04e-07,8;UBERON:0004923,5.78e-07,66;UBERON:0000485,6.04e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.721287081534056,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53620294826866,3.59030577639089,2.7161842980502,3.19001159731919,1.74035427463538,4.26427820814908,0,0,0,0,0,0,0,0,0,0.326465616318295,4.66465135732005,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.438535902517113,0.410577285266046,0,0,0,0,0,0,3.32437350649165,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.824158583811665,0.741438982396034,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,2.65013777824443,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,2.09525355585138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0.380095503034311,0.101988829741982,0,0.827054095813604,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |||
|short_description=p19@PPFIBP2 | |||
}} |
Revision as of 19:44, 10 September 2013
Short description: | p19@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_PPFIBP2_5end |
Coexpression cluster: | C1004_chorionic_pancreatic_choriocarcinoma_amniotic_placenta_colon_Placental |
Association with transcript: | 40bp_to_ENST00000529575_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | E9PIK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.71e-40 | 3 |
germ line cell | 8.30e-18 | 7 |
germ cell | 8.30e-18 | 7 |
intestinal epithelial cell | 1.61e-14 | 4 |
epithelial cell of large intestine | 3.56e-08 | 2 |
epithelial cell of gall bladder | 4.38e-08 | 2 |
cortical cell of adrenal gland | 7.03e-08 | 2 |
extraembryonic cell | 6.63e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.71e-40 | 3 |
chorion | 1.93e-30 | 7 |
extraembryonic membrane | 2.06e-15 | 14 |
membranous layer | 2.06e-15 | 14 |
intestinal mucosa | 1.61e-14 | 4 |
wall of intestine | 1.61e-14 | 4 |
gastrointestinal system mucosa | 1.61e-14 | 4 |
gastrointestinal system epithelium | 1.61e-14 | 4 |
intestinal epithelium | 1.61e-14 | 4 |
extraembryonic structure | 4.20e-09 | 24 |
epithelium of mucosa | 1.04e-07 | 8 |
organ component layer | 5.78e-07 | 66 |
simple columnar epithelium | 6.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.11e-14 | 1 |
endocrine pancreas cancer | 2.11e-14 | 1 |
pancreatic endocrine carcinoma | 2.11e-14 | 1 |
endocrine gland cancer | 1.10e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.