FFCP PHASE1:Hg19::chr11:94501466..94501490,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=154810|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17811|TSSclassifier=S|UniProt=E7ESY6,Q8IY63|association_with_transcript=-17bp_to_ENST00000317829,ENST00000317837,ENST00000542840,NM_130847,uc001pfb.2,uc001pfc.2_5end|description=CAGE_peak_3_at_AMOTL1_5end|id=chr11:94501466..94501490,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;1.46e-07;19|ontology_enrichment_celltype_v019_2=CL:0000349,3.09e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.52e-10!659;UBERON:0003102!3.25e-09!95;UBERON:0004923!3.57e-09!57;UBERON:0005631!6.27e-09!14;UBERON:0000158!6.27e-09!14;UBERON:0000467!7.29e-08!625;UBERON:0000480!1.04e-07!626;UBERON:0000481!4.46e-07!347|ontology_enrichment_uberon_v019=UBERON:0005631;2.93e-07;10!UBERON:0000158;2.93e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.39e-09,14;UBERON:0000158,1.39e-09,14;UBERON:0004923,1.68e-08,66;UBERON:0003102,1.01e-07,99|phase1_expression=0.363356758541113,2.14100523890983,0.422863212287913,5.00366491765652,1.78784437770915,0,0,1.26343974685366,3.91778442299758,1.22866968250754,1.39560233594486,8.08233076881637,5.27533956456907,0.618831764800233,1.32558950291166,2.01697543935533,1.20538905604795,2.92124036154949,0.487932798790507,0.738726348460727,4.48801520737357,0.313454721478088,1.14494394852423,1.36874425072884,1.50651167513763,0,0,0,0.393364276848904,0,0.464448369948228,0,5.12050061923025,2.9580320813343,0.232401601740905,0,2.93600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0.895661896959697,0,0.257575567634187,0,0,0,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0.236482229888585,0,1.29096936716765,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0.580418477257168,0,1.24564449799115,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0,0,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0,0,2.64342657158052,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.79007586580942,1.44575660953827,2.50668955317945,0.579386075843295,0,5.83961844363163,2.17430079477356,1.55210578223795,2.72287835648691,1.57174890597255,1.45718115317017,2.96627554227544,0,0.174129737299267,0.26591592103773,0,0,0.74291500265913,1.19257444420023,2.58070378531837,1.38856200643038,1.13061588384802,0.838998872419812,1.37559020970034,1.8809546988313,1.8089173141853,1.06729878806013,1.67360306382335,2.41697590265488,0,1.95249646038536,1.83831540172934,0.81014194788176,2.14319347881791,2.69435247151404,2.59006405111641,3.06633274931766,0.949265659568129,3.11442964681692,0,0,3.92484646928281,0.496971951695318,1.77282716330412,1.05927344650575,2.58152958673932,1.06400514659507,0.560677600142307,0,0.74000264525148,3.42332138939743,2.96363478553314,1.63461903113459,3.17850598054356,1.15235184896,2.57753575017176,1.87296046098192,0.570471821544449,1.79338416662161,5.40198693761318,3.39933183173076,2.66856532734272,3.0623125688234,2.08818339430006,1.85986406116378,0,0.989067717114227,2.73048408581408,0.718618141816238,0.841680569770331,3.37820003654303,2.77064115484183,0.877955241761676,2.45190236639216,2.10333282469236,0.794025282120147,2.51145489964407,1.06778694409284,1.27159140695737,3.90118424909723,1.64884046781502,1.8034837803194,2.04728541964749,3.03797398034279,2.24105111870757,2.01947019395292,1.47279837827679,1.61646056818812,1.77504796258307,3.12331504505685,2.88253006927829,1.15956511897978,1.90922284413584,5.16248271700207,0.975789649036763,0.397589304964456,0.813357600086629,1.45125477021519,1.51392510525377,1.09493207722749,1.56449532329816,0.643240938192885,1.38134921352481,1.39310378409594,0.721879481669586,0.473227200159376,0.674338760312407,0.723033089650446,0.55146986366197,1.08939722046203,0.949082476444386,0.943819157121151,0.588664395376038,0,3.69077727312324,4.20725321410337,2.4694440679884,0,1.26755034821831,0.982827216677626,0,0.441463099414651,2.09080345523293,2.05881372358231,1.31700342490351,0,6.73544115157927,2.12953423864618,1.95484983186195,5.19967392639789,1.44331342025273,1.15930404975077,2.23076519048061,1.29929802984966,1.85194205030644,1.14152491340759,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,1.17587489739202,1.98485136139341,2.14940454486836,2.3250715081117,2.68367875415648,0,0.880484340132261,1.24396869324463,1.8735593944205,2.01987893482208,1.96843472305724,3.4378958300245,1.17217447210047,0,1.64523988325318,1.50171528921959,0.571652865261156,4.82163662685051,5.66748089483264,1.39342743059805,1.42198887333556,3.57656445851882,1.690605505112,2.6593811658487,2.08014873822732,1.28603687131071,5.67396528093113,1.0656887160644,0.714889968290738,1.08524321078289,0,1.30294473717494,2.13235169245527,1.5839037458668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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=154810 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17811 | |||
|TSSclassifier=S | |||
|UniProt=E7ESY6,Q8IY63 | |||
|association_with_transcript=-17bp_to_ENST00000317829,ENST00000317837,ENST00000542840,NM_130847,uc001pfb.2,uc001pfc.2_5end | |||
|description=CAGE_peak_3_at_AMOTL1_5end | |||
|id=chr11:94501466..94501490,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.46e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.09e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.52e-10!659;UBERON:0003102!3.25e-09!95;UBERON:0004923!3.57e-09!57;UBERON:0005631!6.27e-09!14;UBERON:0000158!6.27e-09!14;UBERON:0000467!7.29e-08!625;UBERON:0000480!1.04e-07!626;UBERON:0000481!4.46e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.93e-07;10!UBERON:0000158;2.93e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.39e-09,14;UBERON:0000158,1.39e-09,14;UBERON:0004923,1.68e-08,66;UBERON:0003102,1.01e-07,99 | |||
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| |||
|short_description=p3@AMOTL1 | |||
}} |
Revision as of 20:14, 10 September 2013
Short description: | p3@AMOTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AMOTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000317829, ENST00000317837, ENST00000542840, NM_130847, uc001pfb.2, uc001pfc.2_5end |
EntrezGene: | AMOTL1 |
HGNC: | 17811 |
UniProt: | E7ESY6Q8IY63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.09e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.39e-09 | 14 |
membranous layer | 1.39e-09 | 14 |
organ component layer | 1.68e-08 | 66 |
surface structure | 1.01e-07 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.