FFCP PHASE1:Hg19::chr12:21927622..21927664,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3764|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6269|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000539350_5end|coexpression_cluster_id=C2202|description=CAGE_peak_1_at_KCNJ8_5end|id=chr12:21927622..21927664,-|ontology_enrichment_celltype=CL:0000136!2.01e-09!15;CL:0002334!7.75e-07!12|ontology_enrichment_celltype_v019=CL:0000136;2.18e-10;13!CL:0002334;4.31e-08;12|ontology_enrichment_celltype_v019_2=CL:0000136,6.41e-12,15;CL:0002334,5.34e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.46e-35!115;UBERON:0000475!1.03e-19!365;UBERON:0000481!1.71e-16!347;UBERON:0001049!1.47e-15!57;UBERON:0005068!1.47e-15!57;UBERON:0006241!1.47e-15!57;UBERON:0007135!1.47e-15!57;UBERON:0000468!1.45e-14!659;UBERON:0001017!2.32e-14!82;UBERON:0005743!3.93e-14!86;UBERON:0000073!5.22e-14!94;UBERON:0001016!5.22e-14!94;UBERON:0000483!5.77e-14!309;UBERON:0002616!1.57e-13!59;UBERON:0000025!1.59e-13!194;UBERON:0000119!2.24e-13!312;UBERON:0003075!6.90e-13!86;UBERON:0007284!6.90e-13!86;UBERON:0000955!3.37e-12!69;UBERON:0006238!3.37e-12!69;UBERON:0004111!3.96e-12!241;UBERON:0003080!4.23e-12!42;UBERON:0002346!7.91e-12!90;UBERON:0002780!1.82e-11!41;UBERON:0001890!1.82e-11!41;UBERON:0006240!1.82e-11!41;UBERON:0000477!4.54e-11!286;UBERON:0002020!1.67e-10!34;UBERON:0003528!1.67e-10!34;UBERON:0001893!2.85e-10!34;UBERON:0002791!5.67e-10!33;UBERON:0000480!5.73e-10!626;UBERON:0002100!7.27e-10!216;UBERON:0000467!7.61e-10!625;UBERON:0001869!1.24e-09!32;UBERON:0002385!1.87e-09!63;UBERON:0001015!1.87e-09!63;UBERON:0000383!1.87e-09!63;UBERON:0000922!4.83e-09!612;UBERON:0001134!1.31e-08!61;UBERON:0002036!1.31e-08!61;UBERON:0003082!1.31e-08!61;UBERON:0000479!1.89e-08!787;UBERON:0002050!2.66e-08!605;UBERON:0005423!2.66e-08!605;UBERON:0003056!5.39e-08!61;UBERON:0000923!5.78e-08!604;UBERON:0005291!5.78e-08!604;UBERON:0006598!5.78e-08!604;UBERON:0002532!5.78e-08!604;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0002619!3.20e-07!22;UBERON:0004290!3.98e-07!70;UBERON:0004121!6.26e-07!169;UBERON:0000062!7.40e-07!511|ontology_enrichment_uberon_v019=UBERON:0000160;1.14e-08;17!UBERON:0007023;4.93e-08;114!UBERON:0001443;5.08e-08;11!UBERON:0001013;7.84e-08;14!UBERON:0005409;5.84e-07;22!UBERON:0000310;6.42e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.43e-32,114;UBERON:0000160,1.90e-08,17;UBERON:0001443,4.87e-08,11;UBERON:0001013,6.90e-08,14;UBERON:0005409,1.50e-07,25;UBERON:0011216,1.82e-07,223;UBERON:0000479,4.88e-07,773;UBERON:0000310,6.17e-07,10|phase1_expression=11.082381135504,9.42042305120326,12.5449419645414,12.0087958023756,5.81049422755474,11.3404008133048,0,0.631719873426831,7.83556884599516,0.245733936501509,0,0,0,0.37129905888014,0.994192127183747,2.6893005858071,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0.204000691244253,0.626909442956176,0.572471974262113,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,5.95163404823525,0.264818361626438,3.15520282823695,1.06400514659507,0,0,0,0.933633106199299,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0.624320153660641,0,0,0.352303495931295,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,2.85452311922534,0.340296549480063,0,0,0.423863802319124,0,0.103052529238439,1.03056216018252,1.48893485065272,0.168776332241266,0.68205903612839,0.252433774244115,0.368199594569197,0.646584227275248,0.355009592516614,0,1.18692414617341,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,0.928735856063958,1.44375896333917,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,29.1536580090211,3.9313088667105,39.5829237476541,0,1.10689594688802,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0.34779121492523,0.234817388471643,0,0,0,6.3216351836742,6.00940313466411,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,2.535908257668,0.797814349754612,1.04007436911366,0,0,0,5.29018576535146,0,0,2.28015329005615,3.19852753868291,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.61642896765115,0.179060963239896,0,0,0,0,0.508189248444927,2.60279707715243,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,2.20844685094452,2.00068208423871,0,1.03985430765404,0.178428988797162,0,0.117141414992713,0,4.5481500811197,0,1.32845119707087,0,0.260650843404249,0.587403472388222,0,0,0,0,0,0,0,4.71404834855676,2.455391572609,5.89386198309454,2.43464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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6269 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000539350_5end | |||
|coexpression_cluster_id=C2202 | |||
|description=CAGE_peak_1_at_KCNJ8_5end | |||
|id=chr12:21927622..21927664,- | |||
|ontology_enrichment_celltype=CL:0000136!2.01e-09!15;CL:0002334!7.75e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.18e-10;13!CL:0002334;4.31e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.41e-12,15;CL:0002334,5.34e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.46e-35!115;UBERON:0000475!1.03e-19!365;UBERON:0000481!1.71e-16!347;UBERON:0001049!1.47e-15!57;UBERON:0005068!1.47e-15!57;UBERON:0006241!1.47e-15!57;UBERON:0007135!1.47e-15!57;UBERON:0000468!1.45e-14!659;UBERON:0001017!2.32e-14!82;UBERON:0005743!3.93e-14!86;UBERON:0000073!5.22e-14!94;UBERON:0001016!5.22e-14!94;UBERON:0000483!5.77e-14!309;UBERON:0002616!1.57e-13!59;UBERON:0000025!1.59e-13!194;UBERON:0000119!2.24e-13!312;UBERON:0003075!6.90e-13!86;UBERON:0007284!6.90e-13!86;UBERON:0000955!3.37e-12!69;UBERON:0006238!3.37e-12!69;UBERON:0004111!3.96e-12!241;UBERON:0003080!4.23e-12!42;UBERON:0002346!7.91e-12!90;UBERON:0002780!1.82e-11!41;UBERON:0001890!1.82e-11!41;UBERON:0006240!1.82e-11!41;UBERON:0000477!4.54e-11!286;UBERON:0002020!1.67e-10!34;UBERON:0003528!1.67e-10!34;UBERON:0001893!2.85e-10!34;UBERON:0002791!5.67e-10!33;UBERON:0000480!5.73e-10!626;UBERON:0002100!7.27e-10!216;UBERON:0000467!7.61e-10!625;UBERON:0001869!1.24e-09!32;UBERON:0002385!1.87e-09!63;UBERON:0001015!1.87e-09!63;UBERON:0000383!1.87e-09!63;UBERON:0000922!4.83e-09!612;UBERON:0001134!1.31e-08!61;UBERON:0002036!1.31e-08!61;UBERON:0003082!1.31e-08!61;UBERON:0000479!1.89e-08!787;UBERON:0002050!2.66e-08!605;UBERON:0005423!2.66e-08!605;UBERON:0003056!5.39e-08!61;UBERON:0000923!5.78e-08!604;UBERON:0005291!5.78e-08!604;UBERON:0006598!5.78e-08!604;UBERON:0002532!5.78e-08!604;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0002619!3.20e-07!22;UBERON:0004290!3.98e-07!70;UBERON:0004121!6.26e-07!169;UBERON:0000062!7.40e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.14e-08;17!UBERON:0007023;4.93e-08;114!UBERON:0001443;5.08e-08;11!UBERON:0001013;7.84e-08;14!UBERON:0005409;5.84e-07;22!UBERON:0000310;6.42e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.43e-32,114;UBERON:0000160,1.90e-08,17;UBERON:0001443,4.87e-08,11;UBERON:0001013,6.90e-08,14;UBERON:0005409,1.50e-07,25;UBERON:0011216,1.82e-07,223;UBERON:0000479,4.88e-07,773;UBERON:0000310,6.17e-07,10 | |||
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| |||
|short_description=p1@KCNJ8 | |||
}} |
Revision as of 22:09, 10 September 2013
Short description: | p1@KCNJ8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KCNJ8_5end |
Coexpression cluster: | C2202_heart_left_Hepatocyte_diaphragm_liver_pancreas_tongue |
Association with transcript: | 0bp_to_ENST00000539350_5end |
EntrezGene: | KCNJ8 |
HGNC: | 6269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.41e-12 | 15 |
preadipocyte | 5.34e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.43e-32 | 114 |
intestine | 1.90e-08 | 17 |
chest | 4.87e-08 | 11 |
adipose tissue | 6.90e-08 | 14 |
gastrointestinal system | 1.50e-07 | 25 |
organ system subdivision | 1.82e-07 | 223 |
tissue | 4.88e-07 | 773 |
breast | 6.17e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.