FFCP PHASE1:Hg19::chr12:51442181..51442184,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25875|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24241|TSSclassifier=S|UniProt=|association_with_transcript=55bp_to_ENST00000547877_5end|description=CAGE_peak_3_at_LETMD1_5end|id=chr12:51442181..51442184,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002521;3.58e-25;3!CL:0002593;2.48e-10;2!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0002521,3.82e-25,3;CL:0002593,2.49e-10,2;CL:0000346,2.05e-07,3;CL:1000428,2.05e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002190;3.58e-25;3!UBERON:0002072;1.56e-15;5!UBERON:0001871;2.24e-11;6!UBERON:0002771;1.50e-10;2!UBERON:0002456;2.48e-10;2!UBERON:0001950;2.13e-08;20!UBERON:0002619;1.02e-07;22!UBERON:0000412;2.63e-07;3!UBERON:0001992;2.63e-07;3!UBERON:0000956;6.90e-07;25!UBERON:0000203;6.90e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.82e-25,3;UBERON:0002072,1.62e-15,5;UBERON:0001871,2.07e-11,6;UBERON:0002771,1.57e-10,2;UBERON:0002456,2.49e-10,2;UBERON:0001950,2.16e-08,20;UBERON:0002619,1.04e-07,22;UBERON:0000412,2.05e-07,3;UBERON:0001992,2.05e-07,3;UBERON:0000956,6.97e-07,25;UBERON:0000203,6.97e-07,25|phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,2.53299878168311,0,1.04474251279935,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.616804496998528,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.989067717114227,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0.710019185033229,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,1.38134921352481,0,0.721879481669586,0,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,1.00451418286425,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.892144943985809,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0.649243880549111,0,0,0,0,0.50787533340481,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868124974666461,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,1.22206028986725,0,0.247127877893006,0.104421949505455,0.269604531922708,0,0,0.182454789215666,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.246346371159628,0.290967049465258,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0.426905989478705,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0.408610218334727,0,0,0.83088067605837,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0,0,2.19647276823534,0.1251909307065,0.573409195690071,0,0,0.276697269872462,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,1.02558182120378,0.756215088665154,0.0691572524642179,0,0,0,0,0.183428598521679,0,0,0,0,0,0.40341013740704,0,0.261906694481422,0.327543835020193,0.295712172434091,0.0675375846183947,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0.647428837187895,0,1.1598144313382,0,0,0.198950775161368,0.594600453887843,0,0.219881033490858,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0.50141507858475,0,0.267964130156178,0,0,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0.190941474834495,0.404234377916439,0,0.342233301085281,0.134704106029175,0,0.665320713092027,0,0,0,0.179650404213174,0,0,0,0,0,0|short_description=p3@LETMD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=25875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24241 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=55bp_to_ENST00000547877_5end | |||
|description=CAGE_peak_3_at_LETMD1_5end | |||
|id=chr12:51442181..51442184,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;3.58e-25;3!CL:0002593;2.48e-10;2!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,3.82e-25,3;CL:0002593,2.49e-10,2;CL:0000346,2.05e-07,3;CL:1000428,2.05e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;3.58e-25;3!UBERON:0002072;1.56e-15;5!UBERON:0001871;2.24e-11;6!UBERON:0002771;1.50e-10;2!UBERON:0002456;2.48e-10;2!UBERON:0001950;2.13e-08;20!UBERON:0002619;1.02e-07;22!UBERON:0000412;2.63e-07;3!UBERON:0001992;2.63e-07;3!UBERON:0000956;6.90e-07;25!UBERON:0000203;6.90e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.82e-25,3;UBERON:0002072,1.62e-15,5;UBERON:0001871,2.07e-11,6;UBERON:0002771,1.57e-10,2;UBERON:0002456,2.49e-10,2;UBERON:0001950,2.16e-08,20;UBERON:0002619,1.04e-07,22;UBERON:0000412,2.05e-07,3;UBERON:0001992,2.05e-07,3;UBERON:0000956,6.97e-07,25;UBERON:0000203,6.97e-07,25 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,2.53299878168311,0,1.04474251279935,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.616804496998528,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.989067717114227,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0.710019185033229,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,1.38134921352481,0,0.721879481669586,0,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,1.00451418286425,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.892144943985809,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0.649243880549111,0,0,0,0,0.50787533340481,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868124974666461,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,1.22206028986725,0,0.247127877893006,0.104421949505455,0.269604531922708,0,0,0.182454789215666,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.246346371159628,0.290967049465258,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0.426905989478705,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0.408610218334727,0,0,0.83088067605837,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0,0,2.19647276823534,0.1251909307065,0.573409195690071,0,0,0.276697269872462,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,1.02558182120378,0.756215088665154,0.0691572524642179,0,0,0,0,0.183428598521679,0,0,0,0,0,0.40341013740704,0,0.261906694481422,0.327543835020193,0.295712172434091,0.0675375846183947,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0.647428837187895,0,1.1598144313382,0,0,0.198950775161368,0.594600453887843,0,0.219881033490858,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0.50141507858475,0,0.267964130156178,0,0,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0.190941474834495,0.404234377916439,0,0.342233301085281,0.134704106029175,0,0.665320713092027,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p3@LETMD1 | |||
}} |
Revision as of 23:01, 10 September 2013
Short description: | p3@LETMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LETMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000547877_5end |
EntrezGene: | LETMD1 |
HGNC: | 24241 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 3.82e-25 | 3 |
smooth muscle cell of the internal thoracic artery | 2.49e-10 | 2 |
hair follicle dermal papilla cell | 2.05e-07 | 3 |
stem cell of epidermis | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.82e-25 | 3 |
hypodermis | 1.62e-15 | 5 |
temporal lobe | 2.07e-11 | 6 |
middle temporal gyrus | 1.57e-10 | 2 |
internal thoracic artery | 2.49e-10 | 2 |
neocortex | 2.16e-08 | 20 |
regional part of cerebral cortex | 1.04e-07 | 22 |
dermal papilla | 2.05e-07 | 3 |
papillary layer of dermis | 2.05e-07 | 3 |
cerebral cortex | 6.97e-07 | 25 |
pallium | 6.97e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.