FFCP PHASE1:Hg19::chr12:53069747..53069765,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C14|description=CAGE_peak_at_chr12:53069747..53069765,-|id=chr12:53069747..53069765,-|ontology_enrichment_celltype=CL:0000775!3.60e-07!3|ontology_enrichment_celltype_v019=CL:0000764;4.89e-11;2!CL:0000558;4.89e-11;2!CL:0000775;3.60e-07;3|ontology_enrichment_celltype_v019_2=CL:0000764,4.89e-11,2;CL:0000765,4.89e-11,2;CL:0000050,4.89e-11,2;CL:0000038,4.89e-11,2;CL:0000558,4.89e-11,2;CL:0000547,4.89e-11,2;CL:0000549,4.89e-11,2;CL:0000550,4.89e-11,2;CL:0000552,4.89e-11,2;CL:0000775,3.08e-07,3|ontology_enrichment_development_v019=UBERON:0004872;8.93e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.90e-28!115;UBERON:0000178!3.31e-19!15;UBERON:0000179!3.31e-19!15;UBERON:0000463!3.31e-19!15;UBERON:0002390!6.88e-13!102;UBERON:0003061!6.88e-13!102;UBERON:0002193!1.15e-12!112|ontology_enrichment_uberon_v019=UBERON:0000178;8.61e-26;15!UBERON:0000179;8.61e-26;15!UBERON:0000463;8.61e-26;15!UBERON:0002390;2.03e-15;32!UBERON:0002133;4.11e-10;2!UBERON:0000922;1.05e-09;49!UBERON:0002193;2.17e-07;42!UBERON:0003978;5.14e-07;3!UBERON:0000946;5.14e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.76e-26,15;UBERON:0000179,8.76e-26,15;UBERON:0000463,8.76e-26,15;UBERON:0002133,5.57e-10,2;UBERON:0007023,1.21e-09,114;UBERON:0003978,6.27e-07,3;UBERON:0009751,6.27e-07,3;UBERON:0000946,6.27e-07,3;UBERON:0002523,6.27e-07,3;UBERON:0005983,6.27e-07,3;UBERON:0002165,6.27e-07,3;UBERON:0002062,6.27e-07,3;UBERON:0007280,6.27e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0,0.580418477257168,1.70215567407342,0,0.502497330513487,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.432359860250884,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6060543423544,47.319816635507,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.22386941009813,0,0,0,0,461.777324401274,503.131282299683,385.081498529734,28.3495812794769,32.0862573007231,429.289332009579,477.927821955732,433.839471432966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0,1.9882952955326,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,1.7755813014648,64.6604349336737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,2.87101043758728,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,1.53036380815245,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,2.15361907373044,0,0,0.223171457441873,4.83721001904429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09145787452985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,29.1515155606887,0.258565912723101,0.13223260174269,0,0,5.33937062838473,13.0479573232723,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,10.555582049354,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,13.9177731760584,2.91426595835484,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,2.113278637917,0,0.375935671919414,28.5548443722947,0,0,0,0,1.46067277649303,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,3.33290204049236,0.193766729508018,1.67601728598816,0,0.318235791390825,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.358611026963382,2.32862249582209,0,0,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0,0.201273793591026,0|short_description=p@chr12:53069747..53069765,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr12:53069747..53069765,- | |||
|id=chr12:53069747..53069765,- | |||
|ontology_enrichment_celltype=CL:0000775!3.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.89e-11;2!CL:0000558;4.89e-11;2!CL:0000775;3.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.89e-11,2;CL:0000765,4.89e-11,2;CL:0000050,4.89e-11,2;CL:0000038,4.89e-11,2;CL:0000558,4.89e-11,2;CL:0000547,4.89e-11,2;CL:0000549,4.89e-11,2;CL:0000550,4.89e-11,2;CL:0000552,4.89e-11,2;CL:0000775,3.08e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;8.93e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.90e-28!115;UBERON:0000178!3.31e-19!15;UBERON:0000179!3.31e-19!15;UBERON:0000463!3.31e-19!15;UBERON:0002390!6.88e-13!102;UBERON:0003061!6.88e-13!102;UBERON:0002193!1.15e-12!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.61e-26;15!UBERON:0000179;8.61e-26;15!UBERON:0000463;8.61e-26;15!UBERON:0002390;2.03e-15;32!UBERON:0002133;4.11e-10;2!UBERON:0000922;1.05e-09;49!UBERON:0002193;2.17e-07;42!UBERON:0003978;5.14e-07;3!UBERON:0000946;5.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.76e-26,15;UBERON:0000179,8.76e-26,15;UBERON:0000463,8.76e-26,15;UBERON:0002133,5.57e-10,2;UBERON:0007023,1.21e-09,114;UBERON:0003978,6.27e-07,3;UBERON:0009751,6.27e-07,3;UBERON:0000946,6.27e-07,3;UBERON:0002523,6.27e-07,3;UBERON:0005983,6.27e-07,3;UBERON:0002165,6.27e-07,3;UBERON:0002062,6.27e-07,3;UBERON:0007280,6.27e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0,0.580418477257168,1.70215567407342,0,0.502497330513487,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.432359860250884,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6060543423544,47.319816635507,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.22386941009813,0,0,0,0,461.777324401274,503.131282299683,385.081498529734,28.3495812794769,32.0862573007231,429.289332009579,477.927821955732,433.839471432966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0,1.9882952955326,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,1.7755813014648,64.6604349336737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,2.87101043758728,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,1.53036380815245,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,2.15361907373044,0,0,0.223171457441873,4.83721001904429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09145787452985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,29.1515155606887,0.258565912723101,0.13223260174269,0,0,5.33937062838473,13.0479573232723,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,10.555582049354,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,13.9177731760584,2.91426595835484,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,2.113278637917,0,0.375935671919414,28.5548443722947,0,0,0,0,1.46067277649303,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,3.33290204049236,0.193766729508018,1.67601728598816,0,0.318235791390825,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.358611026963382,2.32862249582209,0,0,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr12:53069747..53069765,- | |||
}} |
Revision as of 23:12, 10 September 2013
Short description: | p@chr12:53069747..53069765, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:53069747..53069765, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.89e-11 | 2 |
erythroblast | 4.89e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 4.89e-11 | 2 |
erythroid progenitor cell | 4.89e-11 | 2 |
reticulocyte | 4.89e-11 | 2 |
proerythroblast | 4.89e-11 | 2 |
basophilic erythroblast | 4.89e-11 | 2 |
polychromatophilic erythroblast | 4.89e-11 | 2 |
orthochromatic erythroblast | 4.89e-11 | 2 |
neutrophil | 3.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 8.76e-26 | 15 |
haemolymphatic fluid | 8.76e-26 | 15 |
organism substance | 8.76e-26 | 15 |
atrioventricular valve | 5.57e-10 | 2 |
adult organism | 1.21e-09 | 114 |
valve | 6.27e-07 | 3 |
cardiac mesenchyme | 6.27e-07 | 3 |
cardial valve | 6.27e-07 | 3 |
tunica intima | 6.27e-07 | 3 |
heart layer | 6.27e-07 | 3 |
endocardium | 6.27e-07 | 3 |
endocardial cushion | 6.27e-07 | 3 |
presumptive endocardium | 6.27e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.