FFCP PHASE1:Hg19::chr12:78334166..78334180,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89795|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15998|TSSclassifier=S|UniProt=|association_with_transcript=67bp_to_ENST00000551277_5end|coexpression_cluster_id=C1687|description=CAGE_peak_6_at_NAV3_5end|id=chr12:78334166..78334180,+|ontology_enrichment_celltype=CL:0000055!9.80e-24!180;CL:0000057!1.29e-17!75;CL:0002620!2.31e-13!23;CL:0000222!2.33e-12!119;CL:0000548!1.28e-11!679;CL:0000004!1.28e-11!679;CL:0000255!1.28e-11!679;CL:0000012!2.92e-11!682;CL:0000077!3.42e-09!19;CL:0000680!4.41e-09!57;CL:0000056!4.41e-09!57;CL:0000355!4.41e-09!57;CL:0000220!5.66e-09!246;CL:0000144!6.31e-09!625;CL:0002321!1.08e-08!248;CL:0000187!1.68e-08!54;CL:0000192!9.38e-08!42;CL:0000514!9.38e-08!42;CL:0002334!1.20e-07!12;CL:0000183!1.61e-07!59;CL:0000076!2.02e-07!62;CL:0000393!2.44e-07!60;CL:0000211!2.44e-07!60;CL:0000003!3.31e-07!722|ontology_enrichment_celltype_v019=CL:0002620;2.91e-11;23!CL:0000077;9.47e-07;19|ontology_enrichment_celltype_v019_2=CL:0000057,3.79e-13,76;CL:0002620,3.93e-11,23;CL:0000077,9.65e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.16e-09;3!DOID:127;1.16e-09;3!DOID:0060072;2.44e-07;4|ontology_enrichment_disease_v019_2=DOID:0060084,9.41e-10,3;DOID:127,9.41e-10,3;DOID:0060072,2.09e-07,4|ontology_enrichment_uberon=UBERON:0002097!1.38e-10!40;UBERON:0002199!3.00e-10!45;UBERON:0002416!3.00e-10!45;UBERON:0000475!5.29e-10!365;UBERON:0000914!2.14e-09!83;UBERON:0002329!2.14e-09!83;UBERON:0003077!2.14e-09!83;UBERON:0003059!2.14e-09!83;UBERON:0007282!2.14e-09!83;UBERON:0009618!2.14e-09!83;UBERON:0007285!2.14e-09!83;UBERON:0000490!3.56e-09!138;UBERON:0005256!4.80e-09!143;UBERON:0003102!5.53e-09!95;UBERON:0004290!8.90e-09!70;UBERON:0002100!1.11e-08!216;UBERON:0002049!2.31e-08!79;UBERON:0007798!2.31e-08!79;UBERON:0000486!5.20e-08!82;UBERON:0001134!8.63e-08!61;UBERON:0002036!8.63e-08!61;UBERON:0003082!8.63e-08!61;UBERON:0002385!9.78e-08!63;UBERON:0001015!9.78e-08!63;UBERON:0000383!9.78e-08!63|ontology_enrichment_uberon_v019=UBERON:0002097;8.99e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.30e-08,41;UBERON:0002199,8.57e-07,46;UBERON:0002416,8.57e-07,46|phase1_expression=0.363356758541113,1.07050261945492,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,1.46379839637152,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0.550236083880135,1.04497483268405,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.714397826272638,0,1.0135033243499,0,0.949265659568129,0.732806975721629,0,0,0,0.496971951695318,0.379891534993739,2.78059279707759,1.72101972449288,0,0,0,0,0,0,0.490385709340376,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.587172493218824,0.161872944368132,0.702254033511242,0,0.491337269247072,0,0,0.494533858557114,1.82032272387605,0,0.336672227908132,0.375355559615893,1.38532057742091,0.438977620880838,0.30648779579902,0,0.113432183160021,3.04962380671065,0.213557388818567,1.05965950579781,2.10063767259082,0.721367704669072,2.31876486041066,1.48893485065272,3.20675031258406,1.07180705677318,1.7670364197088,0.276149695926898,0.161646056818812,0.710019185033229,1.0075209822764,1.52604533079439,0.386521706326594,0.818238361772504,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.686271241194102,0.658501712451753,0,1.50793458617446,0,0,0,0,0.927443239800615,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,0.36669142910475,1.16344544182,0,0.845302752556,3.72313363218819,3.12022310734098,0.514414748524284,1.41849132023278,0,0.714889968290738,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.399891964728228,0,0,0,0.958499421966331,0,0,1.15825045334063,0,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.35142424497814,0.601892199455438,0,0,0,0.553107505625109,1.12948698808508,0,0.343143423810856,0,0,0,0,1.66435439510497,0,1.24053903909388,3.52962538562544,0.841980283299221,0.768834895534206,0.511707249066704,0.64341568457443,0,0.771048469013278,0.887808626565635,0.492762936082855,1.03850885836724,0.464841513839837,0.241718899183244,0,0,0.574072240823034,0.910455840033585,0.524497659837696,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0,0,0.2238747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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89795 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=67bp_to_ENST00000551277_5end | |||
|coexpression_cluster_id=C1687 | |||
|description=CAGE_peak_6_at_NAV3_5end | |||
|id=chr12:78334166..78334180,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.80e-24!180;CL:0000057!1.29e-17!75;CL:0002620!2.31e-13!23;CL:0000222!2.33e-12!119;CL:0000548!1.28e-11!679;CL:0000004!1.28e-11!679;CL:0000255!1.28e-11!679;CL:0000012!2.92e-11!682;CL:0000077!3.42e-09!19;CL:0000680!4.41e-09!57;CL:0000056!4.41e-09!57;CL:0000355!4.41e-09!57;CL:0000220!5.66e-09!246;CL:0000144!6.31e-09!625;CL:0002321!1.08e-08!248;CL:0000187!1.68e-08!54;CL:0000192!9.38e-08!42;CL:0000514!9.38e-08!42;CL:0002334!1.20e-07!12;CL:0000183!1.61e-07!59;CL:0000076!2.02e-07!62;CL:0000393!2.44e-07!60;CL:0000211!2.44e-07!60;CL:0000003!3.31e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.91e-11;23!CL:0000077;9.47e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.79e-13,76;CL:0002620,3.93e-11,23;CL:0000077,9.65e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.16e-09;3!DOID:127;1.16e-09;3!DOID:0060072;2.44e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.41e-10,3;DOID:127,9.41e-10,3;DOID:0060072,2.09e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.38e-10!40;UBERON:0002199!3.00e-10!45;UBERON:0002416!3.00e-10!45;UBERON:0000475!5.29e-10!365;UBERON:0000914!2.14e-09!83;UBERON:0002329!2.14e-09!83;UBERON:0003077!2.14e-09!83;UBERON:0003059!2.14e-09!83;UBERON:0007282!2.14e-09!83;UBERON:0009618!2.14e-09!83;UBERON:0007285!2.14e-09!83;UBERON:0000490!3.56e-09!138;UBERON:0005256!4.80e-09!143;UBERON:0003102!5.53e-09!95;UBERON:0004290!8.90e-09!70;UBERON:0002100!1.11e-08!216;UBERON:0002049!2.31e-08!79;UBERON:0007798!2.31e-08!79;UBERON:0000486!5.20e-08!82;UBERON:0001134!8.63e-08!61;UBERON:0002036!8.63e-08!61;UBERON:0003082!8.63e-08!61;UBERON:0002385!9.78e-08!63;UBERON:0001015!9.78e-08!63;UBERON:0000383!9.78e-08!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.99e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.30e-08,41;UBERON:0002199,8.57e-07,46;UBERON:0002416,8.57e-07,46 | |||
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| |||
|short_description=p6@NAV3 | |||
}} |
Revision as of 00:32, 11 September 2013
Short description: | p6@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NAV3_5end |
Coexpression cluster: | C1687_liposarcoma_basal_Preadipocyte_Fibroblast_mesenchymal_Smooth_leiomyoma |
Association with transcript: | 67bp_to_ENST00000551277_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.79e-13 | 76 |
skin fibroblast | 3.93e-11 | 23 |
mesothelial cell | 9.65e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.30e-08 | 41 |
integument | 8.57e-07 | 46 |
integumental system | 8.57e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.41e-10 | 3 |
leiomyoma | 9.41e-10 | 3 |
benign neoplasm | 2.09e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.