FFCP PHASE1:Hg19::chr12:98909520..98909531,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7112|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11875|TSSclassifier=S|UniProt=P42167|association_with_transcript=-98bp_to_ENST00000261210_5end|description=CAGE_peak_3_at_TMPO_5end|id=chr12:98909520..98909531,+|ontology_enrichment_celltype=CL:0000066!1.47e-10!254|ontology_enrichment_celltype_v019=CL:0000082;2.77e-08;19|ontology_enrichment_celltype_v019_2=CL:0000066,7.49e-09,253;CL:0000082,4.27e-08,19|ontology_enrichment_development_v019=UBERON:0008947;1.44e-07;29|ontology_enrichment_disease=DOID:162!1.29e-53!235;DOID:14566!9.43e-52!239;DOID:0050687!8.79e-35!143;DOID:305!2.80e-27!106;DOID:0050686!9.34e-24!137;DOID:2531!4.37e-13!51;DOID:0060083!4.37e-13!51;DOID:1240!2.22e-09!39;DOID:0050615!2.57e-07!16;DOID:8692!8.15e-07!31|ontology_enrichment_disease_v019=DOID:0050615;1.25e-10;16!DOID:1324;2.48e-09;15!DOID:305;1.98e-08;106!DOID:2531;7.57e-08;51!DOID:0060083;7.57e-08;51!DOID:0050687;5.10e-07;143|ontology_enrichment_disease_v019_2=DOID:162,3.49e-43,235;DOID:14566,1.06e-41,239;DOID:0050687,9.51e-27,143;DOID:305,1.39e-22,106;DOID:0050686,8.94e-20,137;DOID:2531,3.05e-12,51;DOID:0060083,3.05e-12,51;DOID:0050615,1.55e-10,16;DOID:1324,2.98e-09,15;DOID:1240,3.69e-08,39|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004802;2.77e-08;19!UBERON:0000115;2.77e-08;19!UBERON:0002048;8.57e-07;22!UBERON:0004807;8.57e-07;22!UBERON:0000117;8.57e-07;22!UBERON:0000171;8.57e-07;22!UBERON:0000170;8.57e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0004802,4.27e-08,19;UBERON:0000115,4.27e-08,19|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.85870796139317,2.05311637609326,1.50651167513763,1.14620108621927,1.31360943119913,1.8890587515283,0,0.383829398097213,0.619264493264304,0,0,1.10926203050036,0.697204805222715,1.42169232487422,1.17440175733939,0.553995408531877,0.401088894940283,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,2.70852973188684,0.376484679085209,0.272906150057846,0.449446968890169,0.612167784741805,0,0.639337125799041,0,0.398927315243264,0.852449501065388,0.290209238628584,0.56738522469114,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0,0.750884464207532,0.32145117339416,0,0.79566670879636,1.0959849225878,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,1.31692042387539,0.590129310341499,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0.328875809207352,0.829050053357545,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0.670700859703636,0.639312809217652,0.722878304769133,0,0.144846518960824,0,0,0.472674085820339,0.665188192387692,0.263504357079378,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0.596287222100115,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.714397826272638,1.34717623575702,1.68917220724983,0,0,0.183201743930407,0,0,0.872188104285069,0,0.25326102332916,0,0.286836620748814,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.326923806226917,0,0,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0.822041490506354,0.323745888736263,0.421352420106746,0,0.859840221182376,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,1.6623846929051,0.877955241761676,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.504867548488229,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0,0.818238361772504,0.286804595389004,0.853815942907168,0.530119073285941,0.464775771478074,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0.709840800239063,1.34867752062481,1.44606617930089,0.55146986366197,1.08939722046203,1.89816495288877,0.808987848960987,0.784885860501384,0,0.738155454624648,0,0.4115740113314,0,0,0,0,2.6487785964879,0.122988438543114,0.171567810298526,0,0,0.402115889646523,0.185176890317059,1.3032332212413,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0.925971025153221,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0.425325291727159,0.895585227028483,1.16253575405585,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0.63497894292169,0.763976851116555,0,0,0.102827492703324,0.901029173531752,0.285826432630578,0.448524337381443,0.43596006883328,0.4400297149257,0.129271715757778,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,2.852738100814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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11875 | |||
|TSSclassifier=S | |||
|UniProt=P42167 | |||
|association_with_transcript=-98bp_to_ENST00000261210_5end | |||
|description=CAGE_peak_3_at_TMPO_5end | |||
|id=chr12:98909520..98909531,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.47e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000082;2.77e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.49e-09,253;CL:0000082,4.27e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.44e-07;29 | |||
|ontology_enrichment_disease=DOID:162!1.29e-53!235;DOID:14566!9.43e-52!239;DOID:0050687!8.79e-35!143;DOID:305!2.80e-27!106;DOID:0050686!9.34e-24!137;DOID:2531!4.37e-13!51;DOID:0060083!4.37e-13!51;DOID:1240!2.22e-09!39;DOID:0050615!2.57e-07!16;DOID:8692!8.15e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.25e-10;16!DOID:1324;2.48e-09;15!DOID:305;1.98e-08;106!DOID:2531;7.57e-08;51!DOID:0060083;7.57e-08;51!DOID:0050687;5.10e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.49e-43,235;DOID:14566,1.06e-41,239;DOID:0050687,9.51e-27,143;DOID:305,1.39e-22,106;DOID:0050686,8.94e-20,137;DOID:2531,3.05e-12,51;DOID:0060083,3.05e-12,51;DOID:0050615,1.55e-10,16;DOID:1324,2.98e-09,15;DOID:1240,3.69e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;2.77e-08;19!UBERON:0000115;2.77e-08;19!UBERON:0002048;8.57e-07;22!UBERON:0004807;8.57e-07;22!UBERON:0000117;8.57e-07;22!UBERON:0000171;8.57e-07;22!UBERON:0000170;8.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,4.27e-08,19;UBERON:0000115,4.27e-08,19 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.85870796139317,2.05311637609326,1.50651167513763,1.14620108621927,1.31360943119913,1.8890587515283,0,0.383829398097213,0.619264493264304,0,0,1.10926203050036,0.697204805222715,1.42169232487422,1.17440175733939,0.553995408531877,0.401088894940283,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,2.70852973188684,0.376484679085209,0.272906150057846,0.449446968890169,0.612167784741805,0,0.639337125799041,0,0.398927315243264,0.852449501065388,0.290209238628584,0.56738522469114,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0,0.750884464207532,0.32145117339416,0,0.79566670879636,1.0959849225878,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,1.31692042387539,0.590129310341499,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0.328875809207352,0.829050053357545,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0.670700859703636,0.639312809217652,0.722878304769133,0,0.144846518960824,0,0,0.472674085820339,0.665188192387692,0.263504357079378,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0.596287222100115,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.714397826272638,1.34717623575702,1.68917220724983,0,0,0.183201743930407,0,0,0.872188104285069,0,0.25326102332916,0,0.286836620748814,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.326923806226917,0,0,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0.822041490506354,0.323745888736263,0.421352420106746,0,0.859840221182376,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,1.6623846929051,0.877955241761676,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.504867548488229,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0,0.818238361772504,0.286804595389004,0.853815942907168,0.530119073285941,0.464775771478074,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0.709840800239063,1.34867752062481,1.44606617930089,0.55146986366197,1.08939722046203,1.89816495288877,0.808987848960987,0.784885860501384,0,0.738155454624648,0,0.4115740113314,0,0,0,0,2.6487785964879,0.122988438543114,0.171567810298526,0,0,0.402115889646523,0.185176890317059,1.3032332212413,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0.925971025153221,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0.425325291727159,0.895585227028483,1.16253575405585,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0.63497894292169,0.763976851116555,0,0,0.102827492703324,0.901029173531752,0.285826432630578,0.448524337381443,0.43596006883328,0.4400297149257,0.129271715757778,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,2.85273810081437,0,0.205476322550383,0.358121926479791,4.25923547175404,0.788123040807709,0.215627574859517,0.128343036279748,2.54094624222463,1.30139853857622,2.31986643833309,0.837581326671744,2.55175500661265,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.320182673410333,0.303127571446259,0,0.30239029332968,0,0,0.561320188866147,0,0,0,0,0.308419387605311,0.355123450626254,0.492762936082855,0,0.464841513839837,0.846016147141356,0,0,0.229628896329213,0.546273504020151,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,1.29549549661284,0,0,0,0.764628819135115,0,0.671624264166535,0.219259876645935,0.261435451024901,0,0.656029291399411,0,0.103041011647722,0.732555718546747,0.247528499761764,0,0,0,0.386682873168488,0,0.307007349452259,0.275673144969061,0,0.290033387828457,0.170453254832202,0.267096106940212,0,0.576570202095319,0.382838137483752,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0.7133421029625,0.354761064070598,0,0,0,0.349934720244983,0.48111056362756,0.670302275535787,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0,0.854592569019785,0.962479855263359,0.735120647943095,0.557409525377156,1.298422916788,1.35169502361987,0.637705090915289,1.39705560002972,0.191505370132367,0.423347165447766,0.324621940274555,0.280797178113459,0.68470403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| |||
|short_description=p3@TMPO | |||
}} |
Revision as of 01:12, 11 September 2013
Short description: | p3@TMPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TMPO_5end |
Coexpression cluster: | NA |
Association with transcript: | -98bp_to_ENST00000261210_5end |
EntrezGene: | TMPO |
HGNC: | 11875 |
UniProt: | P42167 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.49e-09 | 253 |
epithelial cell of lung | 4.27e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 4.27e-08 | 19 |
lung epithelium | 4.27e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.49e-43 | 235 |
disease of cellular proliferation | 1.06e-41 | 239 |
cell type cancer | 9.51e-27 | 143 |
carcinoma | 1.39e-22 | 106 |
organ system cancer | 8.94e-20 | 137 |
hematologic cancer | 3.05e-12 | 51 |
immune system cancer | 3.05e-12 | 51 |
respiratory system cancer | 1.55e-10 | 16 |
lung cancer | 2.98e-09 | 15 |
leukemia | 3.69e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.