FFCP PHASE1:Hg19::chr14:94942577..94942588,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=327657|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15995|TSSclassifier=S|UniProt=Q86WD7|association_with_transcript=0bp_to_ENST00000337425,ENST00000424550_5end|coexpression_cluster_id=C210|description=CAGE_peak_3_at_SERPINA9_5end|id=chr14:94942577..94942588,-|ontology_enrichment_celltype=CL:0000359!3.66e-17!32;CL:0000192!7.61e-13!42;CL:0000514!7.61e-13!42;CL:0000187!9.06e-10!54;CL:0000680!3.34e-09!57;CL:0000056!3.34e-09!57;CL:0000355!3.34e-09!57;CL:0000183!7.42e-09!59;CL:0002539!7.63e-09!10;CL:0000393!1.08e-08!60;CL:0000211!1.08e-08!60|ontology_enrichment_celltype_v019=CL:0000945;2.15e-11;24!CL:0002595;6.58e-07;5|ontology_enrichment_celltype_v019_2=CL:0000945,2.11e-11,24;CL:0000826,2.11e-11,24;CL:0002595,6.77e-07,5|ontology_enrichment_development_v019=UBERON:0001045;1.15e-29;1|ontology_enrichment_disease=DOID:2394!1.36e-10!14;DOID:0060058!4.45e-09!10|ontology_enrichment_disease_v019=DOID:0060058;3.17e-26;10|ontology_enrichment_disease_v019_2=DOID:0060058,3.03e-26,10|ontology_enrichment_uberon=UBERON:0001637!7.61e-13!42;UBERON:0003509!7.61e-13!42;UBERON:0004572!7.61e-13!42;UBERON:0004573!8.24e-13!33;UBERON:0004571!8.24e-13!33;UBERON:0000992!2.16e-11!13;UBERON:0001981!5.76e-11!60;UBERON:0007500!5.76e-11!60;UBERON:0004537!5.76e-11!60;UBERON:0006965!5.76e-11!60;UBERON:0001154!8.14e-11!1;UBERON:0001153!8.14e-11!1;UBERON:0002372!8.95e-11!1;UBERON:0001961!8.95e-11!1;UBERON:0001744!8.95e-11!1;UBERON:0001735!8.95e-11!1;UBERON:0007029!2.08e-10!1;UBERON:0002119!6.54e-10!4;UBERON:0004531!6.54e-10!4;UBERON:0000055!2.26e-09!69;UBERON:0004872!3.12e-09!84;UBERON:0004237!7.63e-09!10;UBERON:0004695!7.63e-09!10;UBERON:0002111!7.63e-09!10;UBERON:0004178!7.63e-09!10;UBERON:0001134!1.56e-08!61;UBERON:0002036!1.56e-08!61;UBERON:0003082!1.56e-08!61;UBERON:0002118!2.73e-08!5;UBERON:0004532!2.73e-08!5;UBERON:0002385!3.14e-08!63;UBERON:0001015!3.14e-08!63;UBERON:0000383!3.14e-08!63;UBERON:0002049!5.01e-08!79;UBERON:0007798!5.01e-08!79;UBERON:0000914!1.44e-07!83;UBERON:0002329!1.44e-07!83;UBERON:0003077!1.44e-07!83;UBERON:0003059!1.44e-07!83;UBERON:0007282!1.44e-07!83;UBERON:0009618!1.44e-07!83;UBERON:0007285!1.44e-07!83;UBERON:0004290!2.64e-07!70;UBERON:0000991!4.12e-07!21;UBERON:0009196!4.12e-07!21;UBERON:0009117!4.12e-07!21;UBERON:0005564!4.12e-07!21;UBERON:0004176!8.56e-07!22|ontology_enrichment_uberon_v019=UBERON:0001154;1.15e-29;1!UBERON:0001153;1.15e-29;1!UBERON:0009854;1.15e-29;1!UBERON:0002372;1.78e-29;1!UBERON:0001961;1.78e-29;1!UBERON:0001744;1.78e-29;1!UBERON:0001042;1.78e-29;1!UBERON:0001735;1.78e-29;1!UBERON:0006562;1.78e-15;2!UBERON:0009856;1.89e-08;4!UBERON:0004907;5.23e-07;5!UBERON:0003834;6.58e-07;5!UBERON:0001533;6.58e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.33e-29,1;UBERON:0001153,1.33e-29,1;UBERON:0001045,1.33e-29,1;UBERON:0002372,1.78e-29,1;UBERON:0001961,1.78e-29,1;UBERON:0001744,1.78e-29,1;UBERON:0001735,1.78e-29,1;UBERON:0004907,5.38e-07,5;UBERON:0003834,6.77e-07,5;UBERON:0001533,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47895041856965,13.6482463187925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,1.32687795048244,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45966571934099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,7.79472629637734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0.449803112163605,0,0,0,0,0,0,0,0.727394636810238,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=327657 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15995 | |||
|TSSclassifier=S | |||
|UniProt=Q86WD7 | |||
|association_with_transcript=0bp_to_ENST00000337425,ENST00000424550_5end | |||
|coexpression_cluster_id=C210 | |||
|description=CAGE_peak_3_at_SERPINA9_5end | |||
|id=chr14:94942577..94942588,- | |||
|ontology_enrichment_celltype=CL:0000359!3.66e-17!32;CL:0000192!7.61e-13!42;CL:0000514!7.61e-13!42;CL:0000187!9.06e-10!54;CL:0000680!3.34e-09!57;CL:0000056!3.34e-09!57;CL:0000355!3.34e-09!57;CL:0000183!7.42e-09!59;CL:0002539!7.63e-09!10;CL:0000393!1.08e-08!60;CL:0000211!1.08e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.15e-11;24!CL:0002595;6.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.11e-11,24;CL:0000826,2.11e-11,24;CL:0002595,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.15e-29;1 | |||
|ontology_enrichment_disease=DOID:2394!1.36e-10!14;DOID:0060058!4.45e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.17e-26;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.03e-26,10 | |||
|ontology_enrichment_uberon=UBERON:0001637!7.61e-13!42;UBERON:0003509!7.61e-13!42;UBERON:0004572!7.61e-13!42;UBERON:0004573!8.24e-13!33;UBERON:0004571!8.24e-13!33;UBERON:0000992!2.16e-11!13;UBERON:0001981!5.76e-11!60;UBERON:0007500!5.76e-11!60;UBERON:0004537!5.76e-11!60;UBERON:0006965!5.76e-11!60;UBERON:0001154!8.14e-11!1;UBERON:0001153!8.14e-11!1;UBERON:0002372!8.95e-11!1;UBERON:0001961!8.95e-11!1;UBERON:0001744!8.95e-11!1;UBERON:0001735!8.95e-11!1;UBERON:0007029!2.08e-10!1;UBERON:0002119!6.54e-10!4;UBERON:0004531!6.54e-10!4;UBERON:0000055!2.26e-09!69;UBERON:0004872!3.12e-09!84;UBERON:0004237!7.63e-09!10;UBERON:0004695!7.63e-09!10;UBERON:0002111!7.63e-09!10;UBERON:0004178!7.63e-09!10;UBERON:0001134!1.56e-08!61;UBERON:0002036!1.56e-08!61;UBERON:0003082!1.56e-08!61;UBERON:0002118!2.73e-08!5;UBERON:0004532!2.73e-08!5;UBERON:0002385!3.14e-08!63;UBERON:0001015!3.14e-08!63;UBERON:0000383!3.14e-08!63;UBERON:0002049!5.01e-08!79;UBERON:0007798!5.01e-08!79;UBERON:0000914!1.44e-07!83;UBERON:0002329!1.44e-07!83;UBERON:0003077!1.44e-07!83;UBERON:0003059!1.44e-07!83;UBERON:0007282!1.44e-07!83;UBERON:0009618!1.44e-07!83;UBERON:0007285!1.44e-07!83;UBERON:0004290!2.64e-07!70;UBERON:0000991!4.12e-07!21;UBERON:0009196!4.12e-07!21;UBERON:0009117!4.12e-07!21;UBERON:0005564!4.12e-07!21;UBERON:0004176!8.56e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.15e-29;1!UBERON:0001153;1.15e-29;1!UBERON:0009854;1.15e-29;1!UBERON:0002372;1.78e-29;1!UBERON:0001961;1.78e-29;1!UBERON:0001744;1.78e-29;1!UBERON:0001042;1.78e-29;1!UBERON:0001735;1.78e-29;1!UBERON:0006562;1.78e-15;2!UBERON:0009856;1.89e-08;4!UBERON:0004907;5.23e-07;5!UBERON:0003834;6.58e-07;5!UBERON:0001533;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.33e-29,1;UBERON:0001153,1.33e-29,1;UBERON:0001045,1.33e-29,1;UBERON:0002372,1.78e-29,1;UBERON:0001961,1.78e-29,1;UBERON:0001744,1.78e-29,1;UBERON:0001735,1.78e-29,1;UBERON:0004907,5.38e-07,5;UBERON:0003834,6.77e-07,5;UBERON:0001533,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47895041856965,13.6482463187925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,1.32687795048244,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45966571934099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,7.79472629637734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0.449803112163605,0,0,0,0,0,0,0,0.727394636810238,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16554649168561,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@SERPINA9 | |||
}} |
Revision as of 06:10, 11 September 2013
Short description: | p3@SERPINA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SERPINA9_5end |
Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
Association with transcript: | 0bp_to_ENST00000337425, ENST00000424550_5end |
EntrezGene: | SERPINA9 |
HGNC: | 15995 |
UniProt: | Q86WD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.11e-11 | 24 |
pro-B cell | 2.11e-11 | 24 |
smooth muscle cell of the subclavian artery | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.33e-29 | 1 |
caecum | 1.33e-29 | 1 |
midgut | 1.33e-29 | 1 |
tonsil | 1.78e-29 | 1 |
mucosa-associated lymphoid tissue | 1.78e-29 | 1 |
lymphoid tissue | 1.78e-29 | 1 |
tonsillar ring | 1.78e-29 | 1 |
lower digestive tract | 5.38e-07 | 5 |
thoracic segment blood vessel | 6.77e-07 | 5 |
subclavian artery | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.03e-26 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.